RNA–Protein interactions for RNA: ENST00000313860.11

LIMCH1-201, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMCH1, Length 6,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-201ENST00000313860 BVESQ8NE79 360 aa7.24□□□□□ -1.25
LIMCH1-201ENST00000313860 DNASE2BQ8WZ79 361 aa7.24□□□□□ -1.25
LIMCH1-201ENST00000313860 TTC9Q92623 222 aa7.24□□□□□ -1.25
LIMCH1-201ENST00000313860 HAS1Q92839 578 aa7.24□□□□□ -1.25
LIMCH1-201ENST00000313860 URM1Q9BTM9 101 aaKnown RBP7.24□□□□□ -1.25
LIMCH1-201ENST00000313860 SNX15Q9NRS6 342 aa7.24□□□□□ -1.25
LIMCH1-201ENST00000313860 SLC22A11Q9NSA0 550 aa7.24□□□□□ -1.25
LIMCH1-201ENST00000313860 HSPB8Q9UJY1 196 aa7.24□□□□□ -1.25
LIMCH1-201ENST00000313860 WASLO00401 505 aaPredicted RBP7.24□□□□□ -1.25
LIMCH1-201ENST00000313860 FCN1O00602 326 aa7.24□□□□□ -1.25
LIMCH1-201ENST00000313860 ONECUT2O95948 504 aa7.24□□□□□ -1.25
LIMCH1-201ENST00000313860 CRISP2P16562 243 aa7.24□□□□□ -1.25
LIMCH1-201ENST00000313860 TCN2P20062 427 aa7.24□□□□□ -1.25
LIMCH1-201ENST00000313860 ABCD3P28288 659 aa7.24□□□□□ -1.25
LIMCH1-201ENST00000313860 LIFRP42702 1097 aa7.24□□□□□ -1.25
LIMCH1-201ENST00000313860 POLR2JP52435 117 aaKnown RBP7.24□□□□□ -1.25
LIMCH1-201ENST00000313860 ERVFRD-1P60508 538 aa7.24□□□□□ -1.25
LIMCH1-201ENST00000313860 GPR85P60893 370 aa7.24□□□□□ -1.25
LIMCH1-201ENST00000313860 IRF4Q15306 451 aa7.24□□□□□ -1.25
LIMCH1-201ENST00000313860 TMEM164Q5U3C3 297 aa7.24□□□□□ -1.25
LIMCH1-201ENST00000313860 TMEM244Q5VVB8 128 aa7.24□□□□□ -1.25
LIMCH1-201ENST00000313860 LCLAT1Q6UWP7 414 aa7.24□□□□□ -1.25
LIMCH1-201ENST00000313860 SYT13Q7L8C5 426 aa7.24□□□□□ -1.25
LIMCH1-201ENST00000313860 ZDHHC21Q8IVQ6 265 aa7.24□□□□□ -1.25
LIMCH1-201ENST00000313860 TNS4Q8IZW8 715 aa7.24□□□□□ -1.25
LIMCH1-201ENST00000313860 TMEM234Q8WY98 164 aa7.24□□□□□ -1.25
LIMCH1-201ENST00000313860 EYA1Q99502 592 aa7.24□□□□□ -1.25
LIMCH1-201ENST00000313860 MIEN1Q9BRT3 115 aa7.24□□□□□ -1.25
LIMCH1-201ENST00000313860 SERINC1Q9NRX5 453 aa7.24□□□□□ -1.25
LIMCH1-201ENST00000313860 OLAHQ9NV23 265 aa7.24□□□□□ -1.25
LIMCH1-201ENST00000313860 RAPGEF6Q8TEU7 1601 aa7.24□□□□□ -1.25
LIMCH1-201ENST00000313860 SAP18O00422 153 aaKnown RBP7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 URODP06132 367 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 ACAA1P09110 424 aaPredicted RBP7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 USP17L7P0C7H9 530 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 ALADP13716 330 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 THBS2P35442 1172 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 CSN1S1P47710 185 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 GPM6AP51674 278 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 GSCP56915 257 aaPredicted RBP7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 ATP6V0D1P61421 351 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 RPS13P62277 151 aaKnown RBP7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 UBE2IP63279 158 aaKnown RBP7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 SORDQ00796 357 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 HYAL2Q12891 473 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 SLC18A3Q16572 532 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 POU2AF1Q16633 256 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 MOGQ16653 247 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 C5orf47Q569G3 176 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 HBMQ6B0K9 141 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 Q71RC1 249 aaPredicted RBP7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 PROKR1Q8TCW9 393 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 GPR151Q8TDV0 419 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 RNF133Q8WVZ7 376 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 EAF2Q96CJ1 260 aaPredicted RBP7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 RAB6CQ9H0N0 254 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 KCNK13Q9HB14 408 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 SLC6A5Q9Y345 797 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 RHBDD3Q9Y3P4 386 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 KIAA1210Q9ULL0 1709 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 DUOX2Q9NRD8 1548 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 A0A1B0GTH6 734 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 KLRG2A4D1S0 409 aaPredicted RBP7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 NAP1L6A6NFF2 107 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 J3KR12 359 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 NEURL1O76050 574 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 MT-ND2P03891 347 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 TMEM225BP0DP42 221 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 PPP1CCP36873 323 aaKnown RBP7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 PLAURQ03405 335 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 DUSP7Q16829 419 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 PARP6Q2NL67 630 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 MFSD12Q6NUT3 480 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 SHC4Q6S5L8 630 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 NRARPQ7Z6K4 114 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 REM2Q8IYK8 340 aaPredicted RBP7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 LRR1Q96L50 414 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 BPIFA3Q9BQP9 254 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 OR2AG1Q9H205 316 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 LRIT1Q9P2V4 623 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 HRH3Q9Y5N1 445 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 ERVK-7P63135 1459 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 UBE2L5PA0A1B0GUS4 154 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 IQCF5A8MTL0 148 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 OR2F2O95006 317 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 GJB6O95452 261 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 GLAP06280 429 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 OXTRP30559 389 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 RNF144AP50876 292 aaPredicted RBP7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 FOXK1P85037 733 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 MGAT3Q09327 533 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 DPY19L1Q2PZI1 675 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 C18orf63Q68DL7 685 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 SLC46A3Q7Z3Q1 461 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 ACOT1Q86TX2 421 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 YIPF5Q969M3 257 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 ZBED6CLQ96FA7 236 aaPredicted RBP7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 SPIN2AQ99865 258 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 SPIN2BQ9BPZ2 258 aa7.23□□□□□ -1.25
LIMCH1-201ENST00000313860 PLK3Q9H4B4 646 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms