RNA–Protein interactions for RNA: ENST00000311351.8

LSM1-201, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM1, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-201ENST00000311351 OLIG3Q7RTU3 272 aa14.71□□□□□ -0.05
LSM1-201ENST00000311351 ZZZ3Q8IYH5 903 aa14.71□□□□□ -0.05
LSM1-201ENST00000311351 MEIOBQ8N635 442 aa14.71□□□□□ -0.05
LSM1-201ENST00000311351 OR8J2Q8NGG1 315 aa14.71□□□□□ -0.05
LSM1-201ENST00000311351 RNASE6Q93091 150 aaKnown RBP14.71□□□□□ -0.05
LSM1-201ENST00000311351 ARL8AQ96BM9 186 aa14.71□□□□□ -0.05
LSM1-201ENST00000311351 SLC35G5Q96KT7 338 aa14.71□□□□□ -0.05
LSM1-201ENST00000311351 TEX37Q96LM6 180 aa14.71□□□□□ -0.05
LSM1-201ENST00000311351 UCN2Q96RP3 112 aa14.71□□□□□ -0.05
LSM1-201ENST00000311351 TM9SF2Q99805 663 aa14.71□□□□□ -0.05
LSM1-201ENST00000311351 PIGQQ9BRB3 760 aa14.71□□□□□ -0.05
LSM1-201ENST00000311351 AIG1Q9NVV5 245 aa14.71□□□□□ -0.05
LSM1-201ENST00000311351 THAP1Q9NVV9 213 aa14.71□□□□□ -0.05
LSM1-201ENST00000311351 HRNRQ86YZ3 2850 aaPredicted RBP14.71□□□□□ -0.06
LSM1-201ENST00000311351 MPDZO75970 2070 aa14.7□□□□□ -0.06
LSM1-201ENST00000311351 A0A1W2PQD3 144 aa14.7□□□□□ -0.06
LSM1-201ENST00000311351 E9PBE3 544 aa14.7□□□□□ -0.06
LSM1-201ENST00000311351 SYT5O00445 386 aa14.7□□□□□ -0.06
LSM1-201ENST00000311351 HDAC3O15379 428 aa14.7□□□□□ -0.06
LSM1-201ENST00000311351 RCBTB2O95199 551 aa14.7□□□□□ -0.06
LSM1-201ENST00000311351 CPSF4O95639 269 aaKnown RBP14.7□□□□□ -0.06
LSM1-201ENST00000311351 OPRM1P35372 400 aa14.7□□□□□ -0.06
LSM1-201ENST00000311351 SLC18A1P54219 525 aa14.7□□□□□ -0.06
LSM1-201ENST00000311351 OCRLQ01968 901 aa14.7□□□□□ -0.06
LSM1-201ENST00000311351 ZNF117Q03924 483 aa14.7□□□□□ -0.06
LSM1-201ENST00000311351 NDUFAF6Q330K2 333 aa14.7□□□□□ -0.06
LSM1-201ENST00000311351 FAM174BQ3ZCQ3 159 aa14.7□□□□□ -0.06
LSM1-201ENST00000311351 OGFOD2Q6N063 350 aa14.7□□□□□ -0.06
LSM1-201ENST00000311351 P4HA3Q7Z4N8 544 aa14.7□□□□□ -0.06
LSM1-201ENST00000311351 C6orf120Q7Z4R8 191 aa14.7□□□□□ -0.06
LSM1-201ENST00000311351 TMEM200AQ86VY9 491 aa14.7□□□□□ -0.06
LSM1-201ENST00000311351 WDR75Q8IWA0 830 aaKnown RBP14.7□□□□□ -0.06
LSM1-201ENST00000311351 LRRC34Q8IZ02 419 aa14.7□□□□□ -0.06
LSM1-201ENST00000311351 FIG4Q92562 907 aa14.7□□□□□ -0.06
LSM1-201ENST00000311351 TESCQ96BS2 214 aa14.7□□□□□ -0.06
LSM1-201ENST00000311351 ZNF845Q96IR2 970 aaPredicted RBP14.7□□□□□ -0.06
LSM1-201ENST00000311351 SFXN3Q9BWM7 321 aa14.7□□□□□ -0.06
LSM1-201ENST00000311351 PINK1Q9BXM7 581 aa14.7□□□□□ -0.06
LSM1-201ENST00000311351 MED17Q9NVC6 651 aa14.7□□□□□ -0.06
LSM1-201ENST00000311351 CRIM1Q9NZV1 1036 aa14.7□□□□□ -0.06
LSM1-201ENST00000311351 AKAP9Q99996 3911 aa14.7□□□□□ -0.06
LSM1-201ENST00000311351 HEATR5AQ86XA9 2040 aa14.7□□□□□ -0.06
LSM1-201ENST00000311351 SLC22A20A6NK97 555 aa14.69□□□□□ -0.06
LSM1-201ENST00000311351 TNFRSF21O75509 655 aa14.69□□□□□ -0.06
LSM1-201ENST00000311351 IL18BPO95998 194 aa14.69□□□□□ -0.06
LSM1-201ENST00000311351 C1QCP02747 245 aa14.69□□□□□ -0.06
LSM1-201ENST00000311351 ZNF17P17021 662 aa14.69□□□□□ -0.06
LSM1-201ENST00000311351 MATN1P21941 496 aa14.69□□□□□ -0.06
LSM1-201ENST00000311351 KIR2DL3P43628 341 aa14.69□□□□□ -0.06
LSM1-201ENST00000311351 ZNF41P51814 821 aaPredicted RBP14.69□□□□□ -0.06
LSM1-201ENST00000311351 CLNS1AP54105 237 aaKnown RBP14.69□□□□□ -0.06
LSM1-201ENST00000311351 UFM1P61960 85 aa14.69□□□□□ -0.06
LSM1-201ENST00000311351 PLPPR5Q32ZL2 321 aa14.69□□□□□ -0.06
LSM1-201ENST00000311351 GLYR1Q49A26 553 aaPredicted RBP14.69□□□□□ -0.06
LSM1-201ENST00000311351 FLYWCH1Q4VC44 716 aa14.69□□□□□ -0.06
LSM1-201ENST00000311351 ATG16L1Q676U5 607 aa14.69□□□□□ -0.06
LSM1-201ENST00000311351 BHLHB9Q6PI77 547 aa14.69□□□□□ -0.06
LSM1-201ENST00000311351 CHMP1BQ7LBR1 199 aa14.69□□□□□ -0.06
LSM1-201ENST00000311351 MAVSQ7Z434 540 aa14.69□□□□□ -0.06
LSM1-201ENST00000311351 LUZP2Q86TE4 346 aa14.69□□□□□ -0.06
LSM1-201ENST00000311351 GGNQ86UU5 652 aa14.69□□□□□ -0.06
LSM1-201ENST00000311351 MISPQ8IVT2 679 aa14.69□□□□□ -0.06
LSM1-201ENST00000311351 ZNF614Q8N883 585 aa14.69□□□□□ -0.06
LSM1-201ENST00000311351 GOT1L1Q8NHS2 421 aaPredicted RBP14.69□□□□□ -0.06
LSM1-201ENST00000311351 RAB3IL1Q8TBN0 382 aa14.69□□□□□ -0.06
LSM1-201ENST00000311351 PHOSPHO1Q8TCT1 267 aa14.69□□□□□ -0.06
LSM1-201ENST00000311351 MARK4Q96L34 752 aa14.69□□□□□ -0.06
LSM1-201ENST00000311351 RNF145Q96MT1 663 aa14.69□□□□□ -0.06
LSM1-201ENST00000311351 ZFP3Q96NJ6 502 aa14.69□□□□□ -0.06
LSM1-201ENST00000311351 MANSC1Q9H8J5 431 aa14.69□□□□□ -0.06
LSM1-201ENST00000311351 ARGLU1Q9NWB6 273 aaPredicted RBP14.69□□□□□ -0.06
LSM1-201ENST00000311351 JKAMPQ9P055 326 aa14.69□□□□□ -0.06
LSM1-201ENST00000311351 A0A087WZY1 265 aa14.68□□□□□ -0.06
LSM1-201ENST00000311351 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.68□□□□□ -0.06
LSM1-201ENST00000311351 CENPVL1A0A0U1RR11 272 aa14.68□□□□□ -0.06
LSM1-201ENST00000311351 A0A1W2PNV4 684 aa14.68□□□□□ -0.06
LSM1-201ENST00000311351 NPIPB9F8W1W9 429 aa14.68□□□□□ -0.06
LSM1-201ENST00000311351 LINC01387J3KSC0 135 aa14.68□□□□□ -0.06
LSM1-201ENST00000311351 TNFSF13O75888 250 aa14.68□□□□□ -0.06
LSM1-201ENST00000311351 OPN1LWP04000 364 aa14.68□□□□□ -0.06
LSM1-201ENST00000311351 IL12AP29459 219 aa14.68□□□□□ -0.06
LSM1-201ENST00000311351 DPY19L1Q2PZI1 675 aa14.68□□□□□ -0.06
LSM1-201ENST00000311351 KLHL26Q53HC5 615 aa14.68□□□□□ -0.06
LSM1-201ENST00000311351 ANXA8L1Q5VT79 327 aa14.68□□□□□ -0.06
LSM1-201ENST00000311351 TNFAIP8L2Q6P589 184 aaPredicted RBP14.68□□□□□ -0.06
LSM1-201ENST00000311351 VWA1Q6PCB0 445 aa14.68□□□□□ -0.06
LSM1-201ENST00000311351 CBLN3Q6UW01 205 aa14.68□□□□□ -0.06
LSM1-201ENST00000311351 GTPBP8Q8N3Z3 284 aaPredicted RBP14.68□□□□□ -0.06
LSM1-201ENST00000311351 B4GALNT2Q8NHY0 566 aa14.68□□□□□ -0.06
LSM1-201ENST00000311351 FNDC9Q8TBE3 224 aa14.68□□□□□ -0.06
LSM1-201ENST00000311351 POC1BQ8TC44 478 aa14.68□□□□□ -0.06
LSM1-201ENST00000311351 LRRC46Q96FV0 321 aa14.68□□□□□ -0.06
LSM1-201ENST00000311351 OR51I1Q9H343 314 aa14.68□□□□□ -0.06
LSM1-201ENST00000311351 TMEM185BQ9H7F4 350 aa14.68□□□□□ -0.06
LSM1-201ENST00000311351 PCDHGB4Q9UN71 923 aa14.68□□□□□ -0.06
LSM1-201ENST00000311351 CARD8Q9Y2G2 431 aa14.68□□□□□ -0.06
LSM1-201ENST00000311351 AP4B1Q9Y6B7 739 aa14.68□□□□□ -0.06
LSM1-201ENST00000311351 PRSS51A0A1B0GVH4 220 aa14.67□□□□□ -0.06
LSM1-201ENST00000311351 TRPC5OSA6NMA1 111 aa14.67□□□□□ -0.06
LSM1-201ENST00000311351 ENO4A6NNW6 628 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms