RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 C11orf24Q96F05 449 aaPredicted RBP4.57□□□□□ -1.68
CKS1B-201ENST00000308987 HIST1H2AHQ96KK5 128 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 WDR92Q96MX6 357 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 MCCC1Q96RQ3 725 aaPredicted RBP4.57□□□□□ -1.68
CKS1B-201ENST00000308987 COPS8Q99627 209 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 HIST1H2AJQ99878 128 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 MAPKAP1Q9BPZ7 522 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 COPS4Q9BT78 406 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 H2AFJQ9BTM1 129 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 DOHHQ9BU89 302 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 CCDC32Q9BV29 185 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 CDCA4Q9BXL8 241 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 STRADBQ9C0K7 418 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 OR10A5Q9H207 317 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 CHST8Q9H2A9 424 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 MSL2Q9HCI7 577 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 BPIFA1Q9NP55 256 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 ZNF71Q9NQZ8 489 aaPredicted RBP4.57□□□□□ -1.68
CKS1B-201ENST00000308987 SLC6A13Q9NSD5 602 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 FARSBQ9NSD9 589 aaKnown RBP4.57□□□□□ -1.68
CKS1B-201ENST00000308987 OCIAD1Q9NX40 245 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 THUMPD1Q9NXG2 353 aaKnown RBP4.57□□□□□ -1.68
CKS1B-201ENST00000308987 ARL15Q9NXU5 204 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 PDP1Q9P0J1 537 aaPredicted RBP4.57□□□□□ -1.68
CKS1B-201ENST00000308987 LRIT1Q9P2V4 623 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 NFKBIL1Q9UBC1 381 aaPredicted RBP4.57□□□□□ -1.68
CKS1B-201ENST00000308987 CRNNQ9UBG3 495 aaPredicted RBP4.57□□□□□ -1.68
CKS1B-201ENST00000308987 VPS29Q9UBQ0 182 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 ZNF282Q9UDV7 671 aaPredicted RBP4.57□□□□□ -1.68
CKS1B-201ENST00000308987 CRLS1Q9UJA2 301 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 UTS2RQ9UKP6 389 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 ABCG2Q9UNQ0 655 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 RNF6Q9Y252 685 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 CFL2Q9Y281 166 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 GRIP1Q9Y3R0 1128 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 PLEKHM1Q9Y4G2 1056 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 PCDHGA6Q9Y5G7 932 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 PCDHGA3Q9Y5H0 932 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 PCYT1BQ9Y5K3 369 aaPredicted RBP4.57□□□□□ -1.68
CKS1B-201ENST00000308987 B3GALT1Q9Y5Z6 326 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 MED13LQ71F56 2210 aa4.57□□□□□ -1.68
CKS1B-201ENST00000308987 CCDC168Q8NDH2 2452 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 A0A0U1RQS6 177 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 LOC101059948A0A1B0GTJ6 334 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 C1orf226A1L170 272 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 MYO1GB0I1T2 1018 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 B4DGG1 531 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 RNASET2O00584 256 aaKnown RBP4.56□□□□□ -1.68
CKS1B-201ENST00000308987 TOR1BO14657 336 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 SCAMP2O15127 329 aaKnown RBP4.56□□□□□ -1.68
CKS1B-201ENST00000308987 PPM1DO15297 605 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 ASNA1O43681 348 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 EML2O95834 649 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 FADS2O95864 444 aaKnown RBP4.56□□□□□ -1.68
CKS1B-201ENST00000308987 IGSF6O95976 241 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 TNFP01375 233 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 GSTT2P0CG29 244 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 GSTT2BP0CG30 244 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 CTSEP14091 401 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 GABRB1P18505 474 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 F8A1P23610 371 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 AK4P27144 223 aaPredicted RBP4.56□□□□□ -1.68
CKS1B-201ENST00000308987 SERPINA4P29622 427 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 SOX6P35712 828 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 TRIM23P36406 574 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 LIPAP38571 399 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 CASRP41180 1078 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 PIK3CBP42338 1070 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 MAP2K4P45985 399 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 PCYT1AP49585 367 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 BLKP51451 505 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 UGT2B15P54855 530 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 WNT3P56703 355 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 KIAA1024LP59773 190 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 NCS1P62166 190 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 SELENOWP63302 87 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 KCNJ10P78508 379 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 PLIN5Q00G26 463 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 PIGFQ07326 219 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 ACSM2AQ08AH3 577 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 CHRNA6Q15825 494 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 KCNJ8Q15842 424 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 UGT8Q16880 541 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 TIGD6Q17RP2 521 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 MICAQ29983 383 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 PGS1Q32NB8 556 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 AMZ1Q400G9 498 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 IFI44LQ53G44 452 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 SPIN4Q56A73 249 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 SGO1Q5FBB7 561 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 MEDAGQ5VYS4 303 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 TMEM236Q5W0B7 351 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 ACSM2BQ68CK6 577 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 OR4F3Q6IEY1 312 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 GRHL2Q6ISB3 625 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 FAM151BQ6UXP7 276 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 UNC5DQ6UXZ4 953 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 RFLNAQ6ZTI6 216 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 USP45Q70EL2 814 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 UBE2R2Q712K3 238 aaPredicted RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms