RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 MS4A13Q5J8X5 152 aa4.97□□□□□ -1.61
SCN1A-201ENST00000303395 AKR1C8PQ5T2L2 129 aa4.97□□□□□ -1.61
SCN1A-201ENST00000303395 OR4K2Q8NGD2 314 aa4.97□□□□□ -1.61
SCN1A-201ENST00000303395 SMIM12Q96EX1 92 aa4.97□□□□□ -1.61
SCN1A-201ENST00000303395 LMLNQ96KR4 655 aa4.97□□□□□ -1.61
SCN1A-201ENST00000303395 TRIB1Q96RU8 372 aa4.97□□□□□ -1.61
SCN1A-201ENST00000303395 FIZ1Q96SL8 496 aa4.97□□□□□ -1.61
SCN1A-201ENST00000303395 CMKLR1Q99788 373 aa4.97□□□□□ -1.61
SCN1A-201ENST00000303395 SEC61A2Q9H9S3 476 aa4.97□□□□□ -1.61
SCN1A-201ENST00000303395 V9GYS6 101 aa4.97□□□□□ -1.61
SCN1A-201ENST00000303395 DYSFO75923 2080 aa4.97□□□□□ -1.61
SCN1A-201ENST00000303395 LINC00862A6NCI5 91 aa4.96□□□□□ -1.61
SCN1A-201ENST00000303395 ELOA3DA6NLF2 546 aaPredicted RBP4.96□□□□□ -1.61
SCN1A-201ENST00000303395 PIRO00625 290 aa4.96□□□□□ -1.61
SCN1A-201ENST00000303395 MAGEB4O15481 346 aaPredicted RBP4.96□□□□□ -1.61
SCN1A-201ENST00000303395 EMC8O43402 210 aa4.96□□□□□ -1.61
SCN1A-201ENST00000303395 AHSGP02765 367 aa4.96□□□□□ -1.61
SCN1A-201ENST00000303395 ADH1AP07327 375 aa4.96□□□□□ -1.61
SCN1A-201ENST00000303395 PRKACAP17612 351 aa4.96□□□□□ -1.61
SCN1A-201ENST00000303395 CXCR1P25024 350 aa4.96□□□□□ -1.61
SCN1A-201ENST00000303395 IDH3GP51553 393 aaPredicted RBP4.96□□□□□ -1.61
SCN1A-201ENST00000303395 ZNF280AP59817 542 aaPredicted RBP4.96□□□□□ -1.61
SCN1A-201ENST00000303395 DCAF7P61962 342 aa4.96□□□□□ -1.61
SCN1A-201ENST00000303395 LSM3P62310 102 aaKnown RBP4.96□□□□□ -1.61
SCN1A-201ENST00000303395 H3F3AP84243 136 aa4.96□□□□□ -1.61
SCN1A-201ENST00000303395 CTBP1Q13363 440 aa4.96□□□□□ -1.61
SCN1A-201ENST00000303395 TATDN3Q17R31 274 aa4.96□□□□□ -1.61
SCN1A-201ENST00000303395 ELOA3BQ3SY89 546 aa4.96□□□□□ -1.61
SCN1A-201ENST00000303395 CHRFAM7AQ494W8 412 aa4.96□□□□□ -1.61
SCN1A-201ENST00000303395 ZBTB37Q5TC79 503 aa4.96□□□□□ -1.61
SCN1A-201ENST00000303395 FAM171A1Q5VUB5 890 aa4.96□□□□□ -1.61
SCN1A-201ENST00000303395 GPR155Q7Z3F1 870 aa4.96□□□□□ -1.61
SCN1A-201ENST00000303395 CAMKMTQ7Z624 323 aa4.96□□□□□ -1.61
SCN1A-201ENST00000303395 ELOA3Q8NG57 546 aa4.96□□□□□ -1.61
SCN1A-201ENST00000303395 OR10R2Q8NGX6 335 aa4.96□□□□□ -1.61
SCN1A-201ENST00000303395 DUSP19Q8WTR2 217 aa4.96□□□□□ -1.61
SCN1A-201ENST00000303395 SLC5A11Q8WWX8 675 aa4.96□□□□□ -1.61
SCN1A-201ENST00000303395 CTPS2Q9NRF8 586 aa4.96□□□□□ -1.61
SCN1A-201ENST00000303395 ZDHHC2Q9UIJ5 367 aa4.96□□□□□ -1.61
SCN1A-201ENST00000303395 PAPPAQ13219 1627 aa4.96□□□□□ -1.61
SCN1A-201ENST00000303395 WNK2Q9Y3S1 2297 aa4.96□□□□□ -1.61
SCN1A-201ENST00000303395 NUP98P52948 1817 aa4.96□□□□□ -1.61
SCN1A-201ENST00000303395 A6NLC8 198 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 CDK2AP1O14519 115 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 CDRT1O95170 752 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 RHOP08100 348 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 G6PDP11413 515 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 ELK1P19419 428 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 RAB3BP20337 219 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 MAT2AP31153 395 aaKnown RBP4.96□□□□□ -1.62
SCN1A-201ENST00000303395 S100A11P31949 105 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 HOXD13P35453 343 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 CLRN1P58418 232 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 ACSM1Q08AH1 577 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 ENPP2Q13822 863 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 ZNF266Q14584 549 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 UGCGQ16739 394 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 KHDC1LQ5JSQ8 128 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 MANEAQ5SRI9 462 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 GPR153Q6NV75 609 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 SYT13Q7L8C5 426 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 MAMDC2Q7Z304 686 aaPredicted RBP4.96□□□□□ -1.62
SCN1A-201ENST00000303395 SLC43A3Q8NBI5 491 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 TAAR8Q969N4 342 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 TMEM41AQ96HV5 264 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 PTGES2Q9H7Z7 377 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 PDE7BQ9NP56 450 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 VNN3Q9NY84 501 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 ENTPD2Q9Y5L3 495 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 BLOC1S5-TXNDC5H3BN57 136 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 GABARAPH6UMI1 98 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 FADS1O60427 444 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 ZNF780AO75290 641 aaPredicted RBP4.96□□□□□ -1.62
SCN1A-201ENST00000303395 ZNF821O75541 412 aaPredicted RBP4.96□□□□□ -1.62
SCN1A-201ENST00000303395 SLC25A14O95258 325 aaPredicted RBP4.96□□□□□ -1.62
SCN1A-201ENST00000303395 ADRB1P08588 477 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 ACTR1BP42025 376 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 GRB2P62993 217 aaKnown RBP4.96□□□□□ -1.62
SCN1A-201ENST00000303395 COL19A1Q14993 1142 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 USP50Q70EL3 339 aaPredicted RBP4.96□□□□□ -1.62
SCN1A-201ENST00000303395 PARP16Q8N5Y8 322 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 OR5M3Q8NGP4 307 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 PRAP1Q96NZ9 151 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 CDH20Q9HBT6 801 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 SEMA4GQ9NTN9 838 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 SLC23A1Q9UHI7 598 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 GOLT1BQ9Y3E0 138 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 NOTCH3Q9UM47 2321 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 CEP290O15078 2479 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 A0A1W2PQ45 241 aaPredicted RBP4.96□□□□□ -1.62
SCN1A-201ENST00000303395 A0A1W2PQY0 241 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 SCAMP2O15127 329 aaKnown RBP4.96□□□□□ -1.62
SCN1A-201ENST00000303395 B3GALT2O43825 422 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 SRPX2O60687 465 aaPredicted RBP4.96□□□□□ -1.62
SCN1A-201ENST00000303395 CELF2O95319 508 aaKnown RBP4.96□□□□□ -1.62
SCN1A-201ENST00000303395 NFATC1O95644 943 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 S1PR4O95977 384 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 APOA2P02652 100 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 ENGP17813 658 aa4.96□□□□□ -1.62
SCN1A-201ENST00000303395 FPR3P25089 353 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms