RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 FRG2CA6NGY1 282 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 OR6C76A6NM76 312 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 PATE3B3GLJ2 98 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 NTN3O00634 580 aaPredicted RBP11.09□□□□□ -0.63
TPM3-202ENST00000302206 TM4SF5O14894 197 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 POLR1CO15160 346 aaPredicted RBP11.09□□□□□ -0.63
TPM3-202ENST00000302206 FRS3O43559 492 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 XPNPEP2O43895 674 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 FAM20BO75063 409 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 SEC14L2O76054 403 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 LYPD3O95274 346 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 DDAH2O95865 285 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 TP53P04637 393 aaPredicted RBP11.09□□□□□ -0.63
TPM3-202ENST00000302206 FPR3P25089 353 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 KRT20P35900 424 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 STAT5AP42229 794 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 DAB2P98082 770 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 PMS2P3Q13401 168 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 FGFBP1Q14512 234 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 TMEM201Q5SNT2 666 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 XAF1Q6GPH4 301 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 ZNF730Q6ZMV8 503 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 DBX2Q6ZNG2 339 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 Q6ZPB1 254 aaPredicted RBP11.09□□□□□ -0.63
TPM3-202ENST00000302206 RASSF6Q6ZTQ3 369 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 COX15Q7KZN9 410 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 RRM2BQ7LG56 351 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 PRSS48Q7RTY5 328 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 ZNF550Q7Z398 422 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 ZAR1Q86SH2 424 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 ZNF440Q8IYI8 595 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 BCORP1Q8N888 145 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 KDF1Q8NAX2 398 aaPredicted RBP11.09□□□□□ -0.63
TPM3-202ENST00000302206 OR13F1Q8NGS4 319 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 ZNF420Q8TAQ5 688 aaPredicted RBP11.09□□□□□ -0.63
TPM3-202ENST00000302206 DAZLQ92904 295 aaKnown RBP11.09□□□□□ -0.63
TPM3-202ENST00000302206 TMIGD2Q96BF3 282 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 OR6C1Q96RD1 312 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 SIGLEC11Q96RL6 698 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 GFM1Q96RP9 751 aaKnown RBP11.09□□□□□ -0.63
TPM3-202ENST00000302206 MYCBPQ99417 103 aaPredicted RBP11.09□□□□□ -0.63
TPM3-202ENST00000302206 ITPAQ9BY32 194 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 TRIM2Q9C040 744 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 SLC25A19Q9HC21 320 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 PNO1Q9NRX1 252 aaKnown RBP11.09□□□□□ -0.63
TPM3-202ENST00000302206 RXFP3Q9NSD7 469 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 FKBP14Q9NWM8 211 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 PAK1IP1Q9NWT1 392 aaPredicted RBP11.09□□□□□ -0.63
TPM3-202ENST00000302206 PTTG2Q9NZH5 202 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 RSL24D1Q9UHA3 163 aaKnown RBP11.09□□□□□ -0.63
TPM3-202ENST00000302206 PSORS1C1Q9UIG5 152 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 MRTO4Q9UKD2 239 aaKnown RBP11.09□□□□□ -0.63
TPM3-202ENST00000302206 DTX4Q9Y2E6 619 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 OR10H1Q9Y4A9 318 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 CLCA3PQ9Y6N3 262 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 PI4KAP42356 2102 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 SCN2AQ99250 2005 aa11.09□□□□□ -0.63
TPM3-202ENST00000302206 WDFY3Q8IZQ1 3526 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 IGF2RP11717 2491 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 TMEM8BA6NDV4 472 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 OR2W5A6NFC9 320 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 CLDN24A6NM45 220 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 H3BSA7 217 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 TO15178 435 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 KLF4O43474 513 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 RGS10O43665 173 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 IL33O95760 270 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 THY1P04216 161 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 GP1BAP07359 652 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 FGF5P12034 268 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 PCMT1P22061 227 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 ADH7P40394 386 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 OMPP47874 163 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 IDH2P48735 452 aaKnown RBP11.08□□□□□ -0.64
TPM3-202ENST00000302206 CDK5Q00535 292 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 IL11RAQ14626 422 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 RAB39AQ14964 217 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 SF3A2Q15428 464 aaKnown RBP11.08□□□□□ -0.64
TPM3-202ENST00000302206 OR1Q1Q15612 314 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 MINDY4Q4G0A6 757 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 SLC25A30Q5SVS4 291 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 PDZK1Q5T2W1 519 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 MFSD4BQ5TF39 518 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 STPG1Q5TH74 334 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 PRAMEF17Q5VTA0 474 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 C1orf189Q5VU69 101 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 GTF2IRD2BQ6EKJ0 949 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 B3GNT6Q6ZMB0 384 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 MRGPREQ86SM8 312 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 GTF2IRD2Q86UP8 949 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 CLDN22Q8N7P3 220 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 LSMEM1Q8N8F7 131 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 ZSCAN1Q8NBB4 408 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 ZNF540Q8NDQ6 660 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 OR4N2Q8NGD1 307 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 WDR36Q8NI36 951 aaKnown RBP11.08□□□□□ -0.64
TPM3-202ENST00000302206 SLC2A12Q8TD20 617 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 ZNF721Q8TF20 911 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 TSLPQ969D9 159 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 MYDGFQ969H8 173 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms