RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 PTCHD1Q96NR3 888 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 NMNAT2Q9BZQ4 307 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 TDP1Q9NUW8 608 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 PLEKHJ1Q9NW61 149 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 YIPF1Q9Y548 306 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 MEGF11A6BM72 1044 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 SLC16A5O15375 505 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 ITGB2P05107 769 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 INHAP05111 366 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 MGST1P10620 155 aaKnown RBP14.04□□□□□ -0.16
SCN3B-201ENST00000299333 ARSBP15848 533 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 SELENOWP63302 87 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 MALLQ13021 153 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 DUSP7Q16829 419 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 LBX2Q6XYB7 198 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 RHOUQ7L0Q8 258 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 GRAMD2AQ8IUY3 354 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 OR4N5Q8IXE1 308 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 CELF2-AS1Q8N7Q2 184 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 ERVMER34-1Q9H9K5 563 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 SIAEQ9HAT2 523 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 MYO5BQ9ULV0 1848 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 CD300LBA8K4G0 201 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 G3V2L1 256 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 H3BUI4 141 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 MPC1LP0DKB6 136 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 SLC10A2Q12908 348 aaPredicted RBP14.04□□□□□ -0.16
SCN3B-201ENST00000299333 SLC14A1Q13336 389 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 DUSP6Q16828 381 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 CATSPEREQ5SY80 951 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 VASNQ6EMK4 673 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 ERN2Q76MJ5 926 aaKnown RBP14.04□□□□□ -0.16
SCN3B-201ENST00000299333 OR51Q1Q8NH59 317 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 SFXN5Q8TD22 340 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 IL17FQ96PD4 163 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 SLC7A7Q9UM01 511 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 EDDM13A0A1B0GTR0 161 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 C17orf113A0A1B0GUU1 675 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 GAPDHSO14556 408 aaPredicted RBP14.04□□□□□ -0.16
SCN3B-201ENST00000299333 SULT1C4O75897 302 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 HEXBP07686 556 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 SELENOVP59797 346 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 ERVPABLB-1P60509 514 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 LRRC28Q86X40 367 aaPredicted RBP14.04□□□□□ -0.16
SCN3B-201ENST00000299333 SLC35F3Q8IY50 421 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 TRIB3Q96RU7 358 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 DNAJC5Q9H3Z4 198 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 KAT6AQ92794 2004 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 A0A0D9SG52 128 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 DDCP20711 480 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 NUDT1P36639 197 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 TAS2R38P59533 333 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 CLINT1Q14677 625 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 MEF2DQ14814 521 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 NADSYN1Q6IA69 706 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 TMPPEQ6ZT21 453 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 RFPL4BQ6ZWI9 263 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 TMPRSS7Q7RTY8 843 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 TMEM135Q86UB9 458 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 ZNF417Q8TAU3 575 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 DUSP19Q8WTR2 217 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 UTP4Q969X6 686 aaKnown RBP14.03□□□□□ -0.16
SCN3B-201ENST00000299333 L3HYPDHQ96EM0 354 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 ZNF778Q96MU6 729 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 PELOQ9BRX2 385 aaKnown RBP14.03□□□□□ -0.16
SCN3B-201ENST00000299333 MINDY3Q9H8M7 445 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 FBXL12Q9NXK8 326 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 MMP12P39900 470 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 INHBEP58166 350 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 INAVAQ3KP66 663 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 GPR148Q8TDV2 347 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 IMP4Q96G21 291 aaKnown RBP14.03□□□□□ -0.16
SCN3B-201ENST00000299333 C10orf90Q96M02 699 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 B3GNT2Q9NY97 397 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 STYXL1Q9Y6J8 313 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 GGT3PA6NGU5 568 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 EIF3FO00303 357 aaPredicted RBP14.03□□□□□ -0.16
SCN3B-201ENST00000299333 ANKRD28O15084 1053 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 F3P13726 295 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 PGCP20142 388 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 IDUAP35475 653 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 SF3B4Q15427 424 aaKnown RBP eCLIP14.03□□□□□ -0.16
SCN3B-201ENST00000299333 APIPQ96GX9 242 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 FAM71F1Q96KD3 344 aaPredicted RBP14.03□□□□□ -0.16
SCN3B-201ENST00000299333 TEPSINQ96N21 525 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 SUCNR1Q9BXA5 334 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 A0A1W2PPV4 95 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 H0Y8G0 127 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 SRPX2O60687 465 aaPredicted RBP14.03□□□□□ -0.16
SCN3B-201ENST00000299333 SYNGR4O95473 234 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 PIM1P11309 404 aaPredicted RBP14.03□□□□□ -0.16
SCN3B-201ENST00000299333 NFYAP23511 347 aaPredicted RBP14.03□□□□□ -0.16
SCN3B-201ENST00000299333 GABRB3P28472 473 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 PER3P56645 1201 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 ZNF691Q5VV52 312 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 UNQ6126/PRO20091Q6UXV3 157 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 CHTF18Q8WVB6 975 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 RPL3LQ92901 407 aaKnown RBP14.03□□□□□ -0.16
SCN3B-201ENST00000299333 KIF25Q9UIL4 384 aa14.03□□□□□ -0.16
SCN3B-201ENST00000299333 OSGIN1Q9UJX0 560 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms