RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 CLIP4Q8N3C7 705 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 FAM86B1Q8N7N1 296 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 SPPL2AQ8TCT8 520 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 TPD52L3Q96J77 140 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 ZNF607Q96SK3 696 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 UTP23Q9BRU9 249 aaKnown RBP13.88□□□□□ -0.19
CCDC140-201ENST00000295226 OSBPL11Q9BXB4 747 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 HES7Q9BYE0 225 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 GALNT9Q9HCQ5 603 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 POLE3Q9NRF9 147 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 UBQLN4Q9NRR5 601 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 LRFN1Q9P244 771 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 SEC14L3Q9UDX4 400 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 CHST2Q9Y4C5 530 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 PCDHGA10Q9Y5H3 936 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 CHCHD2Q9Y6H1 151 aaPredicted RBP13.88□□□□□ -0.19
CCDC140-201ENST00000295226 DPPA5A6NC42 116 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 GMFGO60234 142 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 FADS1O60427 444 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 PDGFAP04085 211 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 PABPC4LP0CB38 370 aaKnown RBP13.88□□□□□ -0.19
CCDC140-201ENST00000295226 ETS2P15036 469 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 HPGDP15428 266 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 IL7RP16871 459 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 TNFRSF1BP20333 461 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 TBXA2RP21731 343 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 EVI2BP34910 448 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 CD97P48960 835 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 TMED10P49755 219 aaKnown RBP13.88□□□□□ -0.19
CCDC140-201ENST00000295226 EFR3AQ14156 821 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 CD226Q15762 336 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 ZNF141Q15928 474 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 KLHL26Q53HC5 615 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 ZNF311Q5JNZ3 666 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 OR5M10Q6IEU7 315 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 ENPP6Q6UWR7 440 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 FKBP9P1Q75LS8 142 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 VTCN1Q7Z7D3 282 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 PATL1Q86TB9 770 aaKnown RBP13.88□□□□□ -0.19
CCDC140-201ENST00000295226 LSRQ86X29 649 aaPredicted RBP13.88□□□□□ -0.19
CCDC140-201ENST00000295226 KRT73Q86Y46 540 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 POGLUT1Q8NBL1 392 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 PAPD5Q8NDF8 572 aaKnown RBP13.88□□□□□ -0.19
CCDC140-201ENST00000295226 GPR32P1Q8NGA4 272 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 CANT1Q8WVQ1 401 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 LRTOMTQ8WZ04 291 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 ZNF597Q96LX8 424 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 NSMCE2Q96MF7 247 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 CNTNAP3BQ96NU0 1288 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 WFDC6Q9BQY6 131 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 CNTNAP3Q9BZ76 1288 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 GORASP2Q9H8Y8 452 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 ABI3Q9P2A4 366 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 AP4B1Q9Y6B7 739 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 PCNX3Q9H6A9 2034 aa13.87□□□□□ -0.19
CCDC140-201ENST00000295226 PIEZO2Q9H5I5 2752 aa13.87□□□□□ -0.19
CCDC140-201ENST00000295226 A0A0G2JMM0 328 aa13.87□□□□□ -0.19
CCDC140-201ENST00000295226 A0A1W2PPB8 328 aa13.87□□□□□ -0.19
CCDC140-201ENST00000295226 A0A1W2PRS3 328 aa13.87□□□□□ -0.19
CCDC140-201ENST00000295226 KIR3DP1A8MWS1 328 aa13.87□□□□□ -0.19
CCDC140-201ENST00000295226 SCDO00767 359 aa13.87□□□□□ -0.19
CCDC140-201ENST00000295226 OIP5O43482 229 aa13.87□□□□□ -0.19
CCDC140-201ENST00000295226 SERPINB7O75635 380 aa13.87□□□□□ -0.19
CCDC140-201ENST00000295226 NEURL1O76050 574 aa13.87□□□□□ -0.19
CCDC140-201ENST00000295226 EPPINO95925 133 aa13.87□□□□□ -0.19
CCDC140-201ENST00000295226 UBTFL6P0CB48 400 aaPredicted RBP13.87□□□□□ -0.19
CCDC140-201ENST00000295226 ZNF26P17031 533 aaPredicted RBP13.87□□□□□ -0.19
CCDC140-201ENST00000295226 RPS4Y1P22090 263 aaKnown RBP13.87□□□□□ -0.19
CCDC140-201ENST00000295226 PTGDSP41222 190 aa13.87□□□□□ -0.19
CCDC140-201ENST00000295226 PSPHP78330 225 aa13.87□□□□□ -0.19
CCDC140-201ENST00000295226 ARG2P78540 354 aa13.87□□□□□ -0.19
CCDC140-201ENST00000295226 PLAURQ03405 335 aa13.87□□□□□ -0.19
CCDC140-201ENST00000295226 OR1C1Q15619 314 aa13.87□□□□□ -0.19
CCDC140-201ENST00000295226 INPP5JQ15735 1006 aaPredicted RBP13.87□□□□□ -0.19
CCDC140-201ENST00000295226 AP1ARQ63HQ0 302 aa13.87□□□□□ -0.19
CCDC140-201ENST00000295226 PPP4R4Q6NUP7 873 aa13.87□□□□□ -0.19
CCDC140-201ENST00000295226 ZNF836Q6ZNA1 936 aa13.87□□□□□ -0.19
CCDC140-201ENST00000295226 SNRNP27Q8WVK2 155 aaKnown RBP13.87□□□□□ -0.19
CCDC140-201ENST00000295226 TMCO6Q96DC7 493 aa13.87□□□□□ -0.19
CCDC140-201ENST00000295226 SMAD5Q99717 465 aaKnown RBP13.87□□□□□ -0.19
CCDC140-201ENST00000295226 METTL7AQ9H8H3 244 aa13.87□□□□□ -0.19
CCDC140-201ENST00000295226 PROK2Q9HC23 129 aa13.87□□□□□ -0.19
CCDC140-201ENST00000295226 SH2D2AQ9NP31 389 aa13.87□□□□□ -0.19
CCDC140-201ENST00000295226 KLHL1Q9NR64 748 aa13.87□□□□□ -0.19
CCDC140-201ENST00000295226 DCAF13Q9NV06 445 aaKnown RBP13.87□□□□□ -0.19
CCDC140-201ENST00000295226 ANAPC2Q9UJX6 822 aa13.87□□□□□ -0.19
CCDC140-201ENST00000295226 ZNF443Q9Y2A4 671 aaPredicted RBP13.87□□□□□ -0.19
CCDC140-201ENST00000295226 ZNF451Q9Y4E5 1061 aa13.87□□□□□ -0.19
CCDC140-201ENST00000295226 HRH3Q9Y5N1 445 aa13.87□□□□□ -0.19
CCDC140-201ENST00000295226 BOD1L1Q8NFC6 3051 aa13.87□□□□□ -0.19
CCDC140-201ENST00000295226 ADAM10O14672 748 aa13.86□□□□□ -0.19
CCDC140-201ENST00000295226 TP53I11O14683 189 aa13.86□□□□□ -0.19
CCDC140-201ENST00000295226 FRS3O43559 492 aa13.86□□□□□ -0.19
CCDC140-201ENST00000295226 CYP7B1O75881 506 aa13.86□□□□□ -0.19
CCDC140-201ENST00000295226 PDE9AO76083 593 aa13.86□□□□□ -0.19
CCDC140-201ENST00000295226 PRKD3O94806 890 aa13.86□□□□□ -0.19
CCDC140-201ENST00000295226 DBIP07108 87 aaKnown RBP13.86□□□□□ -0.19
CCDC140-201ENST00000295226 GUSBP08236 651 aa13.86□□□□□ -0.19
CCDC140-201ENST00000295226 FAM87AP0C7U9 286 aa13.86□□□□□ -0.19
CCDC140-201ENST00000295226 CD247P20963 164 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms