RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 TBPL1P62380 186 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 CRMP1Q14194 572 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 OR2M7Q8NG81 312 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 METTL9Q9H1A3 318 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 FBXO7Q9Y3I1 522 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 CD163L1Q9NR16 1453 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 LOC102724200A0A096LPH7 203 aaPredicted RBP11.75□□□□□ -0.53
SLX4-201ENST00000294008 TCRBV7S2A1N4TA0A589 114 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 SHISA7A6NL88 538 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 XRCC3O43542 346 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 PRAMEF2O60811 474 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 CHRNB2P17787 502 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 ACTC1P68032 377 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 ACTA1P68133 377 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 HTRA3P83110 453 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 TLDC1Q6P9B6 456 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 TRMT10BQ6PF06 316 aaKnown RBP11.75□□□□□ -0.53
SLX4-201ENST00000294008 B3GLCTQ6Y288 498 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 OR10AD1Q8NGE0 317 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 FBXL20Q96IG2 436 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 BOD1Q96IK1 185 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 MACROD1Q9BQ69 325 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 RTP3Q9BQQ7 232 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 TMEM208Q9BTX3 173 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 PPIL3Q9H2H8 161 aaKnown RBP11.75□□□□□ -0.53
SLX4-201ENST00000294008 KCNJ16Q9NPI9 418 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 C5AR2Q9P296 337 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 KDELR3O43731 214 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 LGI1O95970 557 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 RNF224P0DH78 156 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 MAOAP21397 527 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 ELK4P28324 431 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 VEGFCP49767 419 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 ARHGAP11AQ6P4F7 1023 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 CCDC71Q8IV32 467 aaPredicted RBP11.75□□□□□ -0.53
SLX4-201ENST00000294008 OR10X1Q8NGY0 326 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 OR2T4Q8NH00 348 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 FNDC9Q8TBE3 224 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 PBX4Q9BYU1 374 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 ACTR3BQ9P1U1 418 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 CLCF1Q9UBD9 225 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 CLEC20AQ6ZU45 233 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 SLC16A14Q7RTX9 510 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 SLC35F2Q8IXU6 374 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 OR1E3Q8WZA6 343 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 HAS1Q92839 578 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 CHFRQ96EP1 664 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 ARPC5LQ9BPX5 153 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 EBF4Q9BQW3 602 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 PENKP01210 267 aaPredicted RBP11.75□□□□□ -0.53
SLX4-201ENST00000294008 CD1BP29016 333 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 OR5AS1Q8N127 324 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 CNIH3Q8TBE1 160 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 NELL2Q99435 816 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 CCDC106Q9BWC9 280 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 CD93Q9NPY3 652 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 ABCC3O15438 1527 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 FSCN2O14926 492 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 DFNA5O60443 496 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 HOXD8P13378 290 aaPredicted RBP11.74□□□□□ -0.53
SLX4-201ENST00000294008 SLC1A3P43003 542 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 RPS5P46782 204 aaKnown RBP11.74□□□□□ -0.53
SLX4-201ENST00000294008 CSN1S1P47710 185 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 TP53I3Q53FA7 332 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 SULF2Q8IWU5 870 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 FAM58AQ8N1B3 248 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 SLC6A17Q9H1V8 727 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 SLC38A1Q9H2H9 487 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 SEC14L4Q9UDX3 406 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 ERVK-7P63135 1459 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 CDK1P06493 297 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 OR8U8P0C7N1 319 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 SNTB2Q13425 540 aaKnown RBP11.74□□□□□ -0.53
SLX4-201ENST00000294008 FBXO43Q4G163 708 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 OCSTAMPQ9BR26 566 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 SLC19A3Q9BZV2 496 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 AQP7P3A6NL99 342 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 RNASEK-C17orf49H0YIS7 233 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 NXPH2O95156 264 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 APBB3O95704 486 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 GDF10P55107 478 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 RAB11AP62491 216 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 OR5I1Q13606 314 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 WFDC8Q8IUA0 241 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 NICN1Q9BSH3 213 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 TMEM43Q9BTV4 400 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 HTN1P15515 57 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 ERP29P30040 261 aaKnown RBP11.74□□□□□ -0.53
SLX4-201ENST00000294008 PSMB10P40306 273 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 VASPP50552 380 aaPredicted RBP11.74□□□□□ -0.53
SLX4-201ENST00000294008 PTTG1IPP53801 180 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 ECM1Q16610 540 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 RPS26P11Q5JNZ5 115 aaPredicted RBP11.74□□□□□ -0.53
SLX4-201ENST00000294008 PLEKHS1Q5SXH7 462 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 NXPE4Q6UWF7 544 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 VRTNQ9H8Y1 702 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 EIF2DP41214 584 aaKnown RBP11.74□□□□□ -0.53
SLX4-201ENST00000294008 LMAN2Q12907 356 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 RUNX3Q13761 415 aa11.74□□□□□ -0.53
SLX4-201ENST00000294008 CLINT1Q14677 625 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms