RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 RAB43Q86YS6 212 aa18.54■□□□□ 0.56
SCUBE1-201ENST00000290460 GALNT6Q8NCL4 622 aa18.54■□□□□ 0.56
SCUBE1-201ENST00000290460 TBX5Q99593 518 aa18.54■□□□□ 0.56
SCUBE1-201ENST00000290460 HCAR1Q9BXC0 346 aa18.54■□□□□ 0.56
SCUBE1-201ENST00000290460 ZNF350Q9GZX5 532 aa18.54■□□□□ 0.56
SCUBE1-201ENST00000290460 EVA1BQ9NVM1 165 aa18.54■□□□□ 0.56
SCUBE1-201ENST00000290460 ACTR10Q9NZ32 417 aa18.54■□□□□ 0.56
SCUBE1-201ENST00000290460 H2AFY2Q9P0M6 372 aaPredicted RBP18.54■□□□□ 0.56
SCUBE1-201ENST00000290460 PTGFRNQ9P2B2 879 aa18.54■□□□□ 0.56
SCUBE1-201ENST00000290460 TNFRSF10DQ9UBN6 386 aa18.54■□□□□ 0.56
SCUBE1-201ENST00000290460 EXOGQ9Y2C4 368 aaKnown RBP18.54■□□□□ 0.56
SCUBE1-201ENST00000290460 VCANP13611 3396 aa18.54■□□□□ 0.56
SCUBE1-201ENST00000290460 SYNDIG1LA6NDD5 238 aa18.54■□□□□ 0.56
SCUBE1-201ENST00000290460 GABRPO00591 440 aa18.54■□□□□ 0.56
SCUBE1-201ENST00000290460 AKAP8O43823 692 aaKnown RBP18.54■□□□□ 0.56
SCUBE1-201ENST00000290460 LSSP48449 732 aa18.54■□□□□ 0.56
SCUBE1-201ENST00000290460 ATAD3CQ5T2N8 411 aa18.54■□□□□ 0.56
SCUBE1-201ENST00000290460 FHL5Q5TD97 284 aa18.54■□□□□ 0.56
SCUBE1-201ENST00000290460 FANK1Q8TC84 345 aa18.54■□□□□ 0.56
SCUBE1-201ENST00000290460 FAM3CQ92520 227 aa18.54■□□□□ 0.56
SCUBE1-201ENST00000290460 SLC35B4Q969S0 331 aa18.54■□□□□ 0.56
SCUBE1-201ENST00000290460 RIPOR3Q96MK2 946 aa18.54■□□□□ 0.56
SCUBE1-201ENST00000290460 PIGUQ9H490 435 aa18.54■□□□□ 0.56
SCUBE1-201ENST00000290460 CAPN10Q9HC96 672 aa18.54■□□□□ 0.56
SCUBE1-201ENST00000290460 MED17Q9NVC6 651 aa18.54■□□□□ 0.56
SCUBE1-201ENST00000290460 PILRAQ9UKJ1 303 aa18.54■□□□□ 0.56
SCUBE1-201ENST00000290460 PCOLCE2Q9UKZ9 415 aa18.54■□□□□ 0.56
SCUBE1-201ENST00000290460 C19orf53Q9UNZ5 99 aaPredicted RBP18.54■□□□□ 0.56
SCUBE1-201ENST00000290460 H0YGG7 62 aa18.53■□□□□ 0.56
SCUBE1-201ENST00000290460 HPGDSO60760 199 aa18.53■□□□□ 0.56
SCUBE1-201ENST00000290460 CSF2P04141 144 aa18.53■□□□□ 0.56
SCUBE1-201ENST00000290460 NT5EP21589 574 aa18.53■□□□□ 0.56
SCUBE1-201ENST00000290460 APEX1P27695 318 aaKnown RBP18.53■□□□□ 0.56
SCUBE1-201ENST00000290460 ARF3P61204 181 aaPredicted RBP18.53■□□□□ 0.56
SCUBE1-201ENST00000290460 KIAA1324Q6UXG2 1013 aaKnown RBP18.53■□□□□ 0.56
SCUBE1-201ENST00000290460 ABI3BPQ7Z7G0 1075 aa18.53■□□□□ 0.56
SCUBE1-201ENST00000290460 RANBP3LQ86VV4 465 aaPredicted RBP18.53■□□□□ 0.56
SCUBE1-201ENST00000290460 SAMD14Q8IZD0 417 aaPredicted RBP18.53■□□□□ 0.56
SCUBE1-201ENST00000290460 ZNF619Q8N2I2 560 aa18.53■□□□□ 0.56
SCUBE1-201ENST00000290460 NEIL3Q8TAT5 605 aa18.53■□□□□ 0.56
SCUBE1-201ENST00000290460 AP3S1Q92572 193 aa18.53■□□□□ 0.56
SCUBE1-201ENST00000290460 ZNF486Q96H40 463 aaPredicted RBP18.53■□□□□ 0.56
SCUBE1-201ENST00000290460 ZNF221Q9UK13 617 aa18.53■□□□□ 0.56
SCUBE1-201ENST00000290460 NDRG2Q9UN36 371 aaKnown RBP18.53■□□□□ 0.56
SCUBE1-201ENST00000290460 GRIP1Q9Y3R0 1128 aa18.53■□□□□ 0.56
SCUBE1-201ENST00000290460 BRWD1Q9NSI6 2320 aa18.53■□□□□ 0.56
SCUBE1-201ENST00000290460 TRAPPC13A5PLN9 417 aa18.53■□□□□ 0.56
SCUBE1-201ENST00000290460 UNC119BA6NIH7 251 aa18.53■□□□□ 0.56
SCUBE1-201ENST00000290460 TNFSF14O43557 240 aa18.53■□□□□ 0.56
SCUBE1-201ENST00000290460 KRT8P05787 483 aa18.53■□□□□ 0.56
SCUBE1-201ENST00000290460 RFX3P48380 749 aa18.53■□□□□ 0.56
SCUBE1-201ENST00000290460 SHC2P98077 582 aa18.53■□□□□ 0.56
SCUBE1-201ENST00000290460 IFITM2Q01629 132 aa18.53■□□□□ 0.56
SCUBE1-201ENST00000290460 ASAH1Q13510 395 aa18.53■□□□□ 0.56
SCUBE1-201ENST00000290460 OR1Q1Q15612 314 aa18.53■□□□□ 0.56
SCUBE1-201ENST00000290460 EIPR1Q53HC9 387 aa18.53■□□□□ 0.56
SCUBE1-201ENST00000290460 PPP2R2DQ66LE6 453 aa18.53■□□□□ 0.56
SCUBE1-201ENST00000290460 ZNF322Q6U7Q0 402 aaPredicted RBP18.53■□□□□ 0.56
SCUBE1-201ENST00000290460 SLC7A5P1Q8MH63 180 aa18.53■□□□□ 0.56
SCUBE1-201ENST00000290460 COX18Q8N8Q8 333 aa18.53■□□□□ 0.56
SCUBE1-201ENST00000290460 STARD5Q9NSY2 213 aa18.53■□□□□ 0.56
SCUBE1-201ENST00000290460 SIDT1Q9NXL6 827 aaKnown RBP18.53■□□□□ 0.56
SCUBE1-201ENST00000290460 PRUNE2Q8WUY3 3088 aa18.53■□□□□ 0.56
SCUBE1-201ENST00000290460 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.52■□□□□ 0.56
SCUBE1-201ENST00000290460 MEIOCA2RUB1 952 aa18.52■□□□□ 0.56
SCUBE1-201ENST00000290460 STX11O75558 287 aa18.52■□□□□ 0.56
SCUBE1-201ENST00000290460 CT62P0C5K7 136 aa18.52■□□□□ 0.56
SCUBE1-201ENST00000290460 IFI30P13284 250 aa18.52■□□□□ 0.56
SCUBE1-201ENST00000290460 P2RY14Q15391 338 aa18.52■□□□□ 0.56
SCUBE1-201ENST00000290460 EOGTQ5NDL2 527 aa18.52■□□□□ 0.56
SCUBE1-201ENST00000290460 FCRLBQ6BAA4 426 aa18.52■□□□□ 0.56
SCUBE1-201ENST00000290460 CNIH2Q6PI25 160 aa18.52■□□□□ 0.56
SCUBE1-201ENST00000290460 ABHD13Q7L211 337 aa18.52■□□□□ 0.56
SCUBE1-201ENST00000290460 TRIM48Q8IWZ4 208 aa18.52■□□□□ 0.56
SCUBE1-201ENST00000290460 FRMD1Q8N878 549 aa18.52■□□□□ 0.56
SCUBE1-201ENST00000290460 GDPD1Q8N9F7 314 aa18.52■□□□□ 0.56
SCUBE1-201ENST00000290460 MRGPRX1Q96LB2 322 aa18.52■□□□□ 0.56
SCUBE1-201ENST00000290460 ZFYVE21Q9BQ24 234 aa18.52■□□□□ 0.56
SCUBE1-201ENST00000290460 NPAP1Q9NZP6 1156 aa18.52■□□□□ 0.56
SCUBE1-201ENST00000290460 ZNF223Q9UK11 482 aaPredicted RBP18.52■□□□□ 0.56
SCUBE1-201ENST00000290460 MYO15AQ9UKN7 3530 aa18.52■□□□□ 0.56
SCUBE1-201ENST00000290460 URADA6NGE7 173 aa18.52■□□□□ 0.55
SCUBE1-201ENST00000290460 C12orf71A8MTZ7 269 aa18.52■□□□□ 0.55
SCUBE1-201ENST00000290460 HLA-DPB1P04440 258 aa18.52■□□□□ 0.55
SCUBE1-201ENST00000290460 HMGN1P05114 100 aa18.52■□□□□ 0.55
SCUBE1-201ENST00000290460 THBS1P07996 1170 aa18.52■□□□□ 0.55
SCUBE1-201ENST00000290460 HYAL1Q12794 435 aa18.52■□□□□ 0.55
SCUBE1-201ENST00000290460 SHHQ15465 462 aa18.52■□□□□ 0.55
SCUBE1-201ENST00000290460 TMEM44Q2T9K0 475 aa18.52■□□□□ 0.55
SCUBE1-201ENST00000290460 ALG11Q2TAA5 492 aa18.52■□□□□ 0.55
SCUBE1-201ENST00000290460 CAMKVQ8NCB2 501 aa18.52■□□□□ 0.55
SCUBE1-201ENST00000290460 TMEM239Q8WW34 195 aa18.52■□□□□ 0.55
SCUBE1-201ENST00000290460 ATF6BQ99941 703 aa18.52■□□□□ 0.55
SCUBE1-201ENST00000290460 SLC22A4Q9H015 551 aa18.52■□□□□ 0.55
SCUBE1-201ENST00000290460 TP63Q9H3D4 680 aaPredicted RBP18.52■□□□□ 0.55
SCUBE1-201ENST00000290460 SIRT4Q9Y6E7 314 aaPredicted RBP18.52■□□□□ 0.55
SCUBE1-201ENST00000290460 LRP4O75096 1905 aa18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 GXYLT2A0PJZ3 443 aa18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 PLA2G10O15496 165 aa18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 CHST10O43529 356 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms