RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 SDHAF3Q9NRP4 125 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 PTRH2Q9Y3E5 179 aaKnown RBP7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 DSPPQ9NZW4 1301 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 AQP12BA6NM10 295 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 MGRN1O60291 552 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 PDE9AO76083 593 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 CT62P0C5K7 136 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 COX6A1P12074 109 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 CXCR1P25024 350 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 GPR143P51810 404 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 SLC37A1P57057 533 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 PCOLCEQ15113 449 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 ADRM1Q16186 407 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 ZSWIM7Q19AV6 140 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 VMACQ2NL98 169 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 RAET1LQ5VY80 246 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 RNF111Q6ZNA4 994 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 AQP12AQ8IXF9 295 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 BHLHE22Q8NFJ8 381 aaPredicted RBP7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 DIO2Q92813 273 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 LPAR4Q99677 370 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 WDR77Q9BQA1 342 aaPredicted RBP7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 MMP25Q9NPA2 562 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 SLC7A8Q9UHI5 535 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 DKKL1Q9UK85 242 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 ACOT8O14734 319 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 SUV39H1O43463 412 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 TMCC2O75069 709 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 CYB5AP00167 134 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 SERPINA1P01009 418 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 ZNF823P16415 610 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 DRD5P21918 477 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 CHRNEQ04844 493 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 CBFBQ13951 182 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 CRB2Q5IJ48 1285 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 THAP5Q7Z6K1 395 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 HMGN2P46Q86SG4 172 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 SLC15A4Q8N697 577 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 HORMAD2Q8N7B1 307 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 OR10A6Q8NH74 314 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 OR7D2Q96RA2 312 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 PTGES2Q9H7Z7 377 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 A0A0G2JPF8 293 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 HNRNPCL3B7ZW38 293 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 JRKO75564 520 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 SNX4O95219 450 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 HMGN2P05204 90 aaKnown RBP7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 C8BP07358 591 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 TFPTP0C1Z6 253 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 HNRNPCL4P0DMR1 293 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 ICAM2P13598 275 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 DLSTP36957 453 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 EMDP50402 254 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 LSM3P62310 102 aaKnown RBP7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 TRMT12Q53H54 448 aaKnown RBP7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 TMPPEQ6ZT21 453 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 ADAMTS17Q8TE56 1095 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 RASSF5Q8WWW0 418 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 HSPBAP1Q96EW2 488 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 TMEM185BQ9H7F4 350 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 HHATLQ9HCP6 504 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 POMPQ9Y244 141 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 MSRB2Q9Y3D2 182 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 CACNA1DQ01668 2161 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 ELOA3DA6NLF2 546 aaPredicted RBP7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 EIF1AYO14602 144 aaKnown RBP7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 HCRTR2O43614 444 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 ETS2P15036 469 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 ABOP16442 354 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 TRHRP34981 398 aaPredicted RBP7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 PCBP3P57721 371 aaKnown RBP7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 SCARB2Q14108 478 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 LASP1Q14847 261 aaKnown RBP7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 ELOA3BQ3SY89 546 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 PLAG1Q6DJT9 500 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 JMJD6Q6NYC1 403 aaPredicted RBP7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 PRICKLE2Q7Z3G6 844 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 NANOGNBQ7Z5D8 188 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 JAZF1Q86VZ6 243 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 CHST4Q8NCG5 386 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 BPIFB6Q8NFQ5 453 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 ELOA3Q8NG57 546 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 ELP5Q8TE02 316 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 RMND5BQ96G75 393 aaPredicted RBP7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 SLC38A2Q96QD8 506 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 UGT2B28Q9BY64 529 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 SAP130Q9H0E3 1048 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 MAGIXQ9H6Y5 334 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 LUZP4Q9P127 313 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 ARPC2O15144 300 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 STX11O75558 287 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 UGT2B17O75795 530 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 ACP2P11117 423 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 TCN2P20062 427 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 PPICP45877 212 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 CRISP3P54108 245 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 ACTR3P61158 418 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 COX20Q5RI15 118 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 TMEM225Q6GV28 225 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms