RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 B4GALNT2Q8NHY0 566 aa22.77■■□□□ 1.24
PDF-201ENST00000288022 PIGQQ9BRB3 760 aa22.77■■□□□ 1.24
PDF-201ENST00000288022 CCDC167Q9P0B6 97 aa22.77■■□□□ 1.24
PDF-201ENST00000288022 MKLN1Q9UL63 735 aa22.77■■□□□ 1.24
PDF-201ENST00000288022 DTNAQ9Y4J8 743 aa22.77■■□□□ 1.24
PDF-201ENST00000288022 SPTBN1Q01082 2364 aaKnown RBP22.77■■□□□ 1.24
PDF-201ENST00000288022 A0A0G2JND7 137 aa22.76■■□□□ 1.23
PDF-201ENST00000288022 GTPBP1O00178 669 aaKnown RBP22.76■■□□□ 1.23
PDF-201ENST00000288022 NR5A2O00482 541 aa22.76■■□□□ 1.23
PDF-201ENST00000288022 FCMRO60667 390 aa22.76■■□□□ 1.23
PDF-201ENST00000288022 EPPINO95925 133 aa22.76■■□□□ 1.23
PDF-201ENST00000288022 NCF2P19878 526 aaPredicted RBP22.76■■□□□ 1.23
PDF-201ENST00000288022 POU3F2P20265 443 aaPredicted RBP22.76■■□□□ 1.23
PDF-201ENST00000288022 GRNP28799 593 aaKnown RBP22.76■■□□□ 1.23
PDF-201ENST00000288022 LHX2P50458 406 aa22.76■■□□□ 1.23
PDF-201ENST00000288022 ZNF41P51814 821 aaPredicted RBP22.76■■□□□ 1.23
PDF-201ENST00000288022 HPCAP84074 193 aa22.76■■□□□ 1.23
PDF-201ENST00000288022 GPAT3Q53EU6 434 aa22.76■■□□□ 1.23
PDF-201ENST00000288022 LACC1Q8IV20 430 aa22.76■■□□□ 1.23
PDF-201ENST00000288022 ROPN1LQ96C74 230 aa22.76■■□□□ 1.23
PDF-201ENST00000288022 SIKE1Q9BRV8 207 aa22.76■■□□□ 1.23
PDF-201ENST00000288022 NMUR2Q9GZQ4 415 aa22.76■■□□□ 1.23
PDF-201ENST00000288022 ZNF350Q9GZX5 532 aa22.76■■□□□ 1.23
PDF-201ENST00000288022 SLC6A13Q9NSD5 602 aa22.76■■□□□ 1.23
PDF-201ENST00000288022 WDR45Q9Y484 360 aa22.76■■□□□ 1.23
PDF-201ENST00000288022 A0A0G2JNJ9 132 aa22.75■■□□□ 1.23
PDF-201ENST00000288022 FAM90A27PA6NNH2 459 aa22.75■■□□□ 1.23
PDF-201ENST00000288022 KDM4EB2RXH2 506 aaPredicted RBP22.75■■□□□ 1.23
PDF-201ENST00000288022 NPIPB9F8W1W9 429 aa22.75■■□□□ 1.23
PDF-201ENST00000288022 HMGN4O00479 90 aa22.75■■□□□ 1.23
PDF-201ENST00000288022 ADH7P40394 386 aa22.75■■□□□ 1.23
PDF-201ENST00000288022 ZNF117Q03924 483 aa22.75■■□□□ 1.23
PDF-201ENST00000288022 SQLEQ14534 574 aa22.75■■□□□ 1.23
PDF-201ENST00000288022 GLYR1Q49A26 553 aaPredicted RBP22.75■■□□□ 1.23
PDF-201ENST00000288022 PDZK1Q5T2W1 519 aa22.75■■□□□ 1.23
PDF-201ENST00000288022 RIPPLY2Q5TAB7 128 aa22.75■■□□□ 1.23
PDF-201ENST00000288022 SP5Q6BEB4 398 aaPredicted RBP22.75■■□□□ 1.23
PDF-201ENST00000288022 SLC2A7Q6PXP3 512 aa22.75■■□□□ 1.23
PDF-201ENST00000288022 UBQLNLQ8IYU4 475 aa22.75■■□□□ 1.23
PDF-201ENST00000288022 ZFP90Q8TF47 636 aa22.75■■□□□ 1.23
PDF-201ENST00000288022 STON2Q8WXE9 905 aa22.75■■□□□ 1.23
PDF-201ENST00000288022 TUBA1CQ9BQE3 449 aa22.75■■□□□ 1.23
PDF-201ENST00000288022 Q9UFV3 132 aa22.75■■□□□ 1.23
PDF-201ENST00000288022 TRIM33Q9UPN9 1127 aa22.75■■□□□ 1.23
PDF-201ENST00000288022 CARD8Q9Y2G2 431 aa22.75■■□□□ 1.23
PDF-201ENST00000288022 A0A087WZY1 265 aa22.74■■□□□ 1.23
PDF-201ENST00000288022 OR2M5A3KFT3 312 aa22.74■■□□□ 1.23
PDF-201ENST00000288022 SHISA8B8ZZ34 492 aa22.74■■□□□ 1.23
PDF-201ENST00000288022 H3BML4 177 aa22.74■■□□□ 1.23
PDF-201ENST00000288022 ATP8B1O43520 1251 aa22.74■■□□□ 1.23
PDF-201ENST00000288022 TNFRSF21O75509 655 aa22.74■■□□□ 1.23
PDF-201ENST00000288022 NUDT14O95848 222 aa22.74■■□□□ 1.23
PDF-201ENST00000288022 ZCCHC18P0CG32 403 aa22.74■■□□□ 1.23
PDF-201ENST00000288022 PEPDP12955 493 aa22.74■■□□□ 1.23
PDF-201ENST00000288022 ZNF708P17019 499 aa22.74■■□□□ 1.23
PDF-201ENST00000288022 ATP4BP51164 291 aa22.74■■□□□ 1.23
PDF-201ENST00000288022 CLDN18P56856 261 aa22.74■■□□□ 1.23
PDF-201ENST00000288022 IRX1P78414 480 aaPredicted RBP22.74■■□□□ 1.23
PDF-201ENST00000288022 TXNL4AP83876 142 aaKnown RBP22.74■■□□□ 1.23
PDF-201ENST00000288022 GUCY1A3Q02108 690 aa22.74■■□□□ 1.23
PDF-201ENST00000288022 GTDC1Q4AE62 458 aa22.74■■□□□ 1.23
PDF-201ENST00000288022 AGKQ53H12 422 aa22.74■■□□□ 1.23
PDF-201ENST00000288022 COX20Q5RI15 118 aa22.74■■□□□ 1.23
PDF-201ENST00000288022 NSUN5P2Q63ZY6 315 aa22.74■■□□□ 1.23
PDF-201ENST00000288022 ZNF787Q6DD87 383 aa22.74■■□□□ 1.23
PDF-201ENST00000288022 BLOC1S3Q6QNY0 202 aa22.74■■□□□ 1.23
PDF-201ENST00000288022 SEM1Q6ZVN7 128 aa22.74■■□□□ 1.23
PDF-201ENST00000288022 FUNDC1Q8IVP5 155 aa22.74■■□□□ 1.23
PDF-201ENST00000288022 LILRB4Q8NHJ6 448 aa22.74■■□□□ 1.23
PDF-201ENST00000288022 ZPLD1Q8TCW7 415 aa22.74■■□□□ 1.23
PDF-201ENST00000288022 CHST11Q9NPF2 352 aa22.74■■□□□ 1.23
PDF-201ENST00000288022 POLE3Q9NRF9 147 aa22.74■■□□□ 1.23
PDF-201ENST00000288022 ZNF337Q9Y3M9 751 aa22.74■■□□□ 1.23
PDF-201ENST00000288022 SETXQ7Z333 2677 aaKnown RBP22.73■■□□□ 1.23
PDF-201ENST00000288022 ARHGAP21Q5T5U3 1957 aa22.73■■□□□ 1.23
PDF-201ENST00000288022 LINC01387J3KSC0 135 aa22.73■■□□□ 1.23
PDF-201ENST00000288022 VIMP08670 466 aaKnown RBP22.73■■□□□ 1.23
PDF-201ENST00000288022 TROVE2P10155 538 aaKnown RBP eCLIP22.73■■□□□ 1.23
PDF-201ENST00000288022 FUT5Q11128 374 aa22.73■■□□□ 1.23
PDF-201ENST00000288022 ZNF141Q15928 474 aa22.73■■□□□ 1.23
PDF-201ENST00000288022 NDUFAF6Q330K2 333 aa22.73■■□□□ 1.23
PDF-201ENST00000288022 CHMP1BQ7LBR1 199 aa22.73■■□□□ 1.23
PDF-201ENST00000288022 MEIOBQ8N635 442 aa22.73■■□□□ 1.23
PDF-201ENST00000288022 TMCO5AQ8N6Q1 288 aa22.73■■□□□ 1.23
PDF-201ENST00000288022 TNIP2Q8NFZ5 429 aa22.73■■□□□ 1.23
PDF-201ENST00000288022 SMPDL3BQ92485 455 aa22.73■■□□□ 1.23
PDF-201ENST00000288022 GTF2H4Q92759 462 aa22.73■■□□□ 1.23
PDF-201ENST00000288022 SPDL1Q96EA4 605 aa22.73■■□□□ 1.23
PDF-201ENST00000288022 RABEP2Q9H5N1 569 aa22.73■■□□□ 1.23
PDF-201ENST00000288022 TPT1P8Q9HAU6 139 aa22.73■■□□□ 1.23
PDF-201ENST00000288022 MED17Q9NVC6 651 aa22.73■■□□□ 1.23
PDF-201ENST00000288022 FGFR1OP2Q9NVK5 253 aa22.73■■□□□ 1.23
PDF-201ENST00000288022 LIPT1Q9Y234 373 aa22.73■■□□□ 1.23
PDF-201ENST00000288022 PCNX1Q96RV3 2341 aa22.73■■□□□ 1.23
PDF-201ENST00000288022 NKX2-6A6NCS4 301 aa22.72■■□□□ 1.23
PDF-201ENST00000288022 SERINC4A6NH21 518 aa22.72■■□□□ 1.23
PDF-201ENST00000288022 CD8B2A6NJW9 211 aa22.72■■□□□ 1.23
PDF-201ENST00000288022 HSPB2A8KAH6 182 aa22.72■■□□□ 1.23
PDF-201ENST00000288022 SEC14L5O43304 696 aa22.72■■□□□ 1.23
PDF-201ENST00000288022 OIP5O43482 229 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms