RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 DPPA4Q7L190 304 aa11.8□□□□□ -0.52
SLC6A1-201ENST00000287766 SLC9B2Q86UD5 537 aa11.8□□□□□ -0.52
SLC6A1-201ENST00000287766 COMTD1Q86VU5 262 aa11.8□□□□□ -0.52
SLC6A1-201ENST00000287766 LAX1Q8IWV1 398 aa11.8□□□□□ -0.52
SLC6A1-201ENST00000287766 TRMT10AQ8TBZ6 339 aaKnown RBP11.8□□□□□ -0.52
SLC6A1-201ENST00000287766 ADAMTS19Q8TE59 1207 aa11.8□□□□□ -0.52
SLC6A1-201ENST00000287766 TREX2Q9BQ50 279 aaPredicted RBP11.8□□□□□ -0.52
SLC6A1-201ENST00000287766 SYNPO2LQ9H987 977 aa11.8□□□□□ -0.52
SLC6A1-201ENST00000287766 PSORS1C1Q9UIG5 152 aa11.8□□□□□ -0.52
SLC6A1-201ENST00000287766 ARID2Q68CP9 1835 aa11.8□□□□□ -0.52
SLC6A1-201ENST00000287766 SEC16AO15027 2179 aa11.8□□□□□ -0.52
SLC6A1-201ENST00000287766 RPL19P84098 196 aaKnown RBP11.8□□□□□ -0.52
SLC6A1-201ENST00000287766 C1orf61Q13536 156 aa11.8□□□□□ -0.52
SLC6A1-201ENST00000287766 NFATC4Q14934 902 aa11.8□□□□□ -0.52
SLC6A1-201ENST00000287766 CCNJQ5T5M9 372 aa11.8□□□□□ -0.52
SLC6A1-201ENST00000287766 PLBD1Q6P4A8 553 aa11.8□□□□□ -0.52
SLC6A1-201ENST00000287766 GDPGP1Q6ZNW5 385 aa11.8□□□□□ -0.52
SLC6A1-201ENST00000287766 ST8SIA2Q92186 375 aa11.8□□□□□ -0.52
SLC6A1-201ENST00000287766 HRASLS5Q96KN8 279 aa11.8□□□□□ -0.52
SLC6A1-201ENST00000287766 SSX3Q99909 188 aa11.8□□□□□ -0.52
SLC6A1-201ENST00000287766 SAP130Q9H0E3 1048 aa11.8□□□□□ -0.52
SLC6A1-201ENST00000287766 ABCG4Q9H172 646 aa11.8□□□□□ -0.52
SLC6A1-201ENST00000287766 ATG5Q9H1Y0 275 aa11.8□□□□□ -0.52
SLC6A1-201ENST00000287766 GOSR2O14653 212 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 SOX30O94993 753 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 CPNE6O95741 557 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 CD160O95971 181 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 HRGP04196 525 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 CYP17A1P05093 508 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 FURINP09958 794 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 JUNBP17275 347 aaPredicted RBP11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 PITPNBP48739 271 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 ZNF91Q05481 1191 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 CLVS2Q5SYC1 327 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 VASH1Q7L8A9 365 aaPredicted RBP11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 STK35Q8TDR2 534 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 FKBP10Q96AY3 582 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 ARSGQ96EG1 525 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 EGLN3Q9H6Z9 239 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 ZNF304Q9HCX3 659 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 CACNG2Q9Y698 323 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 SC5DO75845 299 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 RENP00797 406 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 SLC19A1P41440 591 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 GAS6Q14393 721 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 TBCEQ15813 527 aaPredicted RBP11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 EIPR1Q53HC9 387 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 ZDHHC1Q8WTX9 485 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 C16orf58Q96GQ5 468 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 RAB11FIP5Q9BXF6 653 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 CCDC86Q9H6F5 360 aaKnown RBP11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 B4DGG1 531 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 C1QCP02747 245 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 GKN3PP0CG01 181 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 HOXB2P14652 356 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 AKR1C4P17516 323 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 CD6P30203 668 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 GRPRP30550 384 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 GABRA3P34903 492 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 IGFALSP35858 605 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 RBMXP38159 391 aaKnown RBP11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 EIF1AXP47813 144 aaKnown RBP11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 MASP1P48740 699 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 HYAL4Q2M3T9 481 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 INAVAQ3KP66 663 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 CDNFQ49AH0 187 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 DEFB119Q8N690 84 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 NATD1Q8N6N6 113 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 OR2T33Q8NG76 320 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 OR4K14Q8NGD5 310 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 ARL11Q969Q4 196 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 TXNDC15Q96J42 360 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 E9PI62 339 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 RAB28P51157 221 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 METAP1P53582 386 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 GK2Q14410 553 aaPredicted RBP11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 HNRNPA1L2Q32P51 320 aaKnown RBP11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 C14orf28Q4W4Y0 310 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 HES5Q5TA89 166 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 PTOV1Q86YD1 416 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 TMEFF1Q8IYR6 380 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 C12orf45Q8N5I9 185 aaPredicted RBP11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 SAMD8Q96LT4 415 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 GALNT9Q9HCQ5 603 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 MYNNQ9NPC7 610 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 KLHL42Q9P2K6 505 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 AP1M2Q9Y6Q5 423 aa11.79□□□□□ -0.52
SLC6A1-201ENST00000287766 SLC33A1O00400 549 aaPredicted RBP11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 PRICKLE3O43900 615 aaPredicted RBP11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 ARAFP10398 606 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 AK4P27144 223 aaPredicted RBP11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 WNT4P56705 351 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 CLDN2P57739 230 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 ZNF584Q8IVC4 421 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 CPOQ8IVL8 374 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 ANKK1Q8NFD2 765 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 BBS10Q8TAM1 723 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 SUN3Q8TAQ9 357 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 GNPDA2Q8TDQ7 276 aa11.78□□□□□ -0.52
SLC6A1-201ENST00000287766 C3orf49Q96BT1 292 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms