RNA–Protein interactions for RNA: ENST00000286428.5

VBP1-201, Transcript of VHL binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VBP1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-201ENST00000286428 RBM34P42696 430 aaKnown RBP17.52■□□□□ 0.39
VBP1-201ENST00000286428 HOXC5Q00444 222 aa17.52■□□□□ 0.39
VBP1-201ENST00000286428 IL11RAQ14626 422 aa17.52■□□□□ 0.39
VBP1-201ENST00000286428 GINS1Q14691 196 aa17.52■□□□□ 0.39
VBP1-201ENST00000286428 OCLNQ16625 522 aa17.52■□□□□ 0.39
VBP1-201ENST00000286428 PRAMEF17Q5VTA0 474 aa17.52■□□□□ 0.39
VBP1-201ENST00000286428 GTF2IRD2BQ6EKJ0 949 aa17.52■□□□□ 0.39
VBP1-201ENST00000286428 SLC29A4Q7RTT9 530 aa17.52■□□□□ 0.39
VBP1-201ENST00000286428 GTF2IRD2Q86UP8 949 aa17.52■□□□□ 0.39
VBP1-201ENST00000286428 CCDC103Q8IW40 242 aa17.52■□□□□ 0.39
VBP1-201ENST00000286428 CYP4Z2PQ8N1L4 340 aa17.52■□□□□ 0.39
VBP1-201ENST00000286428 TMEM239Q8WW34 195 aa17.52■□□□□ 0.39
VBP1-201ENST00000286428 CRELD1Q96HD1 420 aa17.52■□□□□ 0.39
VBP1-201ENST00000286428 CCNL2Q96S94 520 aaPredicted RBP17.52■□□□□ 0.39
VBP1-201ENST00000286428 PRR14Q9BWN1 585 aa17.52■□□□□ 0.39
VBP1-201ENST00000286428 GTPBP2Q9BX10 602 aaKnown RBP17.52■□□□□ 0.39
VBP1-201ENST00000286428 LHPPQ9H008 270 aa17.52■□□□□ 0.39
VBP1-201ENST00000286428 FKBP14Q9NWM8 211 aa17.52■□□□□ 0.39
VBP1-201ENST00000286428 RPS6KB2Q9UBS0 482 aa17.52■□□□□ 0.39
VBP1-201ENST00000286428 WARS2Q9UGM6 360 aaKnown RBP17.52■□□□□ 0.39
VBP1-201ENST00000286428 DTX4Q9Y2E6 619 aa17.52■□□□□ 0.39
VBP1-201ENST00000286428 MED31Q9Y3C7 131 aa17.52■□□□□ 0.39
VBP1-201ENST00000286428 CENPVL1A0A0U1RR11 272 aa17.51■□□□□ 0.39
VBP1-201ENST00000286428 C2orf92A0A1B0GVN3 265 aa17.51■□□□□ 0.39
VBP1-201ENST00000286428 IRGMA1A4Y4 181 aa17.51■□□□□ 0.39
VBP1-201ENST00000286428 SERINC4A6NH21 518 aa17.51■□□□□ 0.39
VBP1-201ENST00000286428 CHP2O43745 196 aa17.51■□□□□ 0.39
VBP1-201ENST00000286428 HYAL3O43820 417 aaPredicted RBP17.51■□□□□ 0.39
VBP1-201ENST00000286428 IL33O95760 270 aa17.51■□□□□ 0.39
VBP1-201ENST00000286428 ONECUT2O95948 504 aa17.51■□□□□ 0.39
VBP1-201ENST00000286428 CLPSP04118 112 aa17.51■□□□□ 0.39
VBP1-201ENST00000286428 GKN3PP0CG01 181 aa17.51■□□□□ 0.39
VBP1-201ENST00000286428 PIPP12273 146 aaPredicted RBP17.51■□□□□ 0.39
VBP1-201ENST00000286428 PCYT1AP49585 367 aa17.51■□□□□ 0.39
VBP1-201ENST00000286428 COPZ1P61923 177 aa17.51■□□□□ 0.39
VBP1-201ENST00000286428 TMEM44Q2T9K0 475 aa17.51■□□□□ 0.39
VBP1-201ENST00000286428 TMEM201Q5SNT2 666 aa17.51■□□□□ 0.39
VBP1-201ENST00000286428 SYT6Q5T7P8 510 aaPredicted RBP17.51■□□□□ 0.39
VBP1-201ENST00000286428 TMPRSS9Q7Z410 1059 aa17.51■□□□□ 0.39
VBP1-201ENST00000286428 FAM26EQ8N5C1 309 aa17.51■□□□□ 0.39
VBP1-201ENST00000286428 C17orf47Q8NEP4 570 aa17.51■□□□□ 0.39
VBP1-201ENST00000286428 OR1N1Q8NGS0 311 aa17.51■□□□□ 0.39
VBP1-201ENST00000286428 ZNF721Q8TF20 911 aa17.51■□□□□ 0.39
VBP1-201ENST00000286428 GGHQ92820 318 aa17.51■□□□□ 0.39
VBP1-201ENST00000286428 TSLPQ969D9 159 aa17.51■□□□□ 0.39
VBP1-201ENST00000286428 FAM46AQ96IP4 442 aaKnown RBP17.51■□□□□ 0.39
VBP1-201ENST00000286428 NECAB3Q96P71 396 aaPredicted RBP17.51■□□□□ 0.39
VBP1-201ENST00000286428 VN1R1Q9GZP7 353 aa17.51■□□□□ 0.39
VBP1-201ENST00000286428 C11orf16Q9NQ32 467 aa17.51■□□□□ 0.39
VBP1-201ENST00000286428 AASSQ9UDR5 926 aa17.51■□□□□ 0.39
VBP1-201ENST00000286428 PCDHGB2Q9Y5G2 931 aa17.51■□□□□ 0.39
VBP1-201ENST00000286428 PCDHGA5Q9Y5G8 931 aa17.51■□□□□ 0.39
VBP1-201ENST00000286428 HTR3EA5X5Y0 456 aa17.5■□□□□ 0.39
VBP1-201ENST00000286428 SCDO00767 359 aa17.5■□□□□ 0.39
VBP1-201ENST00000286428 CSTAP01040 98 aa17.5■□□□□ 0.39
VBP1-201ENST00000286428 IGKV1D-16P01601 117 aa17.5■□□□□ 0.39
VBP1-201ENST00000286428 SP9P0CG40 484 aa17.5■□□□□ 0.39
VBP1-201ENST00000286428 GRK6P43250 576 aa17.5■□□□□ 0.39
VBP1-201ENST00000286428 PIGFQ07326 219 aa17.5■□□□□ 0.39
VBP1-201ENST00000286428 NKAIN1Q4KMZ8 207 aa17.5■□□□□ 0.39
VBP1-201ENST00000286428 LAIR1Q6GTX8 287 aa17.5■□□□□ 0.39
VBP1-201ENST00000286428 NRMQ8IXM6 262 aa17.5■□□□□ 0.39
VBP1-201ENST00000286428 FAR1Q8WVX9 515 aa17.5■□□□□ 0.39
VBP1-201ENST00000286428 METTL21AQ8WXB1 218 aa17.5■□□□□ 0.39
VBP1-201ENST00000286428 ACOT13Q9NPJ3 140 aa17.5■□□□□ 0.39
VBP1-201ENST00000286428 DNAJB12Q9NXW2 375 aaKnown RBP17.5■□□□□ 0.39
VBP1-201ENST00000286428 IL20Q9NYY1 176 aa17.5■□□□□ 0.39
VBP1-201ENST00000286428 TVP23BQ9NYZ1 205 aa17.5■□□□□ 0.39
VBP1-201ENST00000286428 TRIOO75962 3097 aa17.49■□□□□ 0.39
VBP1-201ENST00000286428 A8MUA0 341 aa17.49■□□□□ 0.39
VBP1-201ENST00000286428 PATE3B3GLJ2 98 aa17.49■□□□□ 0.39
VBP1-201ENST00000286428 KHNYNO15037 678 aaKnown RBP17.49■□□□□ 0.39
VBP1-201ENST00000286428 CNOT3O75175 753 aaKnown RBP17.49■□□□□ 0.39
VBP1-201ENST00000286428 DDAH2O95865 285 aa17.49■□□□□ 0.39
VBP1-201ENST00000286428 MT-ND2P03891 347 aa17.49■□□□□ 0.39
VBP1-201ENST00000286428 TP53P04637 393 aaPredicted RBP17.49■□□□□ 0.39
VBP1-201ENST00000286428 HMGN1P05114 100 aa17.49■□□□□ 0.39
VBP1-201ENST00000286428 GP1BAP07359 652 aa17.49■□□□□ 0.39
VBP1-201ENST00000286428 ZGLP1P0C6A0 271 aa17.49■□□□□ 0.39
VBP1-201ENST00000286428 HTR2AP28223 471 aa17.49■□□□□ 0.39
VBP1-201ENST00000286428 LSAMPQ13449 338 aa17.49■□□□□ 0.39
VBP1-201ENST00000286428 TBCEQ15813 527 aaPredicted RBP17.49■□□□□ 0.39
VBP1-201ENST00000286428 SNAPC1Q16533 368 aa17.49■□□□□ 0.39
VBP1-201ENST00000286428 PHF19Q5T6S3 580 aa17.49■□□□□ 0.39
VBP1-201ENST00000286428 ULK3Q6PHR2 472 aa17.49■□□□□ 0.39
VBP1-201ENST00000286428 ZAR1Q86SH2 424 aa17.49■□□□□ 0.39
VBP1-201ENST00000286428 SLC43A2Q8N370 569 aa17.49■□□□□ 0.39
VBP1-201ENST00000286428 GALNT15Q8N3T1 639 aa17.49■□□□□ 0.39
VBP1-201ENST00000286428 WDR36Q8NI36 951 aaKnown RBP17.49■□□□□ 0.39
VBP1-201ENST00000286428 RNF217Q8TC41 542 aa17.49■□□□□ 0.39
VBP1-201ENST00000286428 STT3BQ8TCJ2 826 aa17.49■□□□□ 0.39
VBP1-201ENST00000286428 TMEM255BQ8WV15 326 aa17.49■□□□□ 0.39
VBP1-201ENST00000286428 DNAJA4Q8WW22 397 aaPredicted RBP17.49■□□□□ 0.39
VBP1-201ENST00000286428 SGCDQ92629 289 aa17.49■□□□□ 0.39
VBP1-201ENST00000286428 C12orf43Q96C57 262 aaKnown RBP17.49■□□□□ 0.39
VBP1-201ENST00000286428 HSPBAP1Q96EW2 488 aa17.49■□□□□ 0.39
VBP1-201ENST00000286428 SIGLEC11Q96RL6 698 aa17.49■□□□□ 0.39
VBP1-201ENST00000286428 MED17Q9NVC6 651 aa17.49■□□□□ 0.39
VBP1-201ENST00000286428 CACNA1EQ15878 2313 aa17.49■□□□□ 0.39
VBP1-201ENST00000286428 A0A0B4J2E0 115 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms