RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 ENAMQ9NRM1 1142 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 CYSLTR2Q9NS75 346 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 TAC3Q9UHF0 121 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 SCP2D1Q9UJQ7 156 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 SHISA3A0PJX4 238 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 RTCAO00442 366 aaKnown RBP9.69□□□□□ -0.86
SKA1-201ENST00000285116 LANCL1O43813 399 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 FGF18O76093 207 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 CA3P07451 260 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 TEAD1P28347 426 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 RNF144AP50876 292 aaPredicted RBP9.69□□□□□ -0.86
SKA1-201ENST00000285116 NTHL1P78549 312 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 ST3GAL3Q11203 375 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 BTN1A1Q13410 526 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 EOGTQ5NDL2 527 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 VASNQ6EMK4 673 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 AMZ2Q86W34 360 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 MS4A15Q8N5U1 240 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 ZFP41Q8N8Y5 198 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 SLC9A6Q92581 669 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 IL17FQ96PD4 163 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 DPH7Q9BTV6 452 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 TMED9Q9BVK6 235 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 SLC7A5P2Q9GIP4 190 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 TBC1D17Q9HA65 648 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 IMP3Q9NV31 184 aaKnown RBP9.69□□□□□ -0.86
SKA1-201ENST00000285116 HCFC1R1Q9NWW0 138 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 NTMQ9P121 344 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 GLS2Q9UI32 602 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 TBX21Q9UL17 535 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 ZDBF2Q9HCK1 2354 aa9.69□□□□□ -0.86
SKA1-201ENST00000285116 COL4A2P08572 1712 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 EDDM13A0A1B0GTR0 161 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 LRIT2A6NDA9 550 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 POM121CA8CG34 1229 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 M0R233 179 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 ACSM4P0C7M7 580 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 LINC00271P0C7V0 271 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 SULT1A3P0DMM9 295 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 SULT1A4P0DMN0 295 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 ADRB3P13945 408 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 RBMS1P29558 406 aaKnown RBP9.68□□□□□ -0.86
SKA1-201ENST00000285116 RFX3P48380 749 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 CSNK1G2P78368 415 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 C9orf64Q5T6V5 341 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 TMEM91Q6ZNR0 172 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 PIGXQ8TBF5 258 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 ACOT11Q8WXI4 607 aaPredicted RBP9.68□□□□□ -0.86
SKA1-201ENST00000285116 ERMAPQ96PL5 475 aaPredicted RBP9.68□□□□□ -0.86
SKA1-201ENST00000285116 MFRPQ9BY79 579 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 EGLN3Q9H6Z9 239 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 ZCCHC3Q9NUD5 404 aaKnown RBP9.68□□□□□ -0.86
SKA1-201ENST00000285116 COPZ2Q9P299 210 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 SESN1Q9Y6P5 492 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 CKAP5Q14008 2032 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 GPR171O14626 319 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 CCL16O15467 120 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 OR5F1O95221 314 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 APOL3O95236 402 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 CFDP00746 253 aaPredicted RBP9.68□□□□□ -0.86
SKA1-201ENST00000285116 TCRBP04435 133 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 HMGN1P05114 100 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 POU2F2P09086 479 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 C4BPBP20851 252 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 NUP62P37198 522 aaPredicted RBP9.68□□□□□ -0.86
SKA1-201ENST00000285116 CAPZA2P47755 286 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 CDH11P55287 796 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 ST8SIA6P61647 398 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 EIF2B5Q13144 721 aaKnown RBP9.68□□□□□ -0.86
SKA1-201ENST00000285116 FZD5Q13467 585 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 SHHQ15465 462 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 TRAM1Q15629 374 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 HNRNPA1L2Q32P51 320 aaKnown RBP9.68□□□□□ -0.86
SKA1-201ENST00000285116 WASH2PQ6VEQ5 465 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 LMNTD1Q8N9Z9 388 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 XAGE5Q8WWM1 108 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 ADAMTS14Q8WXS8 1223 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 ING5Q8WYH8 240 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 OR8D1Q8WZ84 308 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 RAB7BQ96AH8 199 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 TCEAL4Q96EI5 215 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 WBP1Q96G27 269 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 HDAC8Q9BY41 377 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 SHARPINQ9H0F6 387 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 FN3KQ9H479 309 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 OSGEPL1Q9H4B0 414 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 DLL4Q9NR61 685 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 INPP5EQ9NRR6 644 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 KCMF1Q9P0J7 381 aa9.68□□□□□ -0.86
SKA1-201ENST00000285116 ZNF624Q9P2J8 865 aaPredicted RBP9.68□□□□□ -0.86
SKA1-201ENST00000285116 GSAPA4D1B5 854 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 KPNA3O00505 521 aaPredicted RBP9.67□□□□□ -0.86
SKA1-201ENST00000285116 LALBAP00709 142 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 TFPIP10646 304 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 PITPNBP48739 271 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 EPHA4P54764 986 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 RAG2P55895 527 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 ERVFC1P60507 584 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 ZNF273Q14593 569 aa9.67□□□□□ -0.86
SKA1-201ENST00000285116 AGERQ15109 404 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms