RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 SS18L1O75177 396 aaPredicted RBP11.43□□□□□ -0.58
CD44-203ENST00000278386 NUDT14O95848 222 aa11.43□□□□□ -0.58
CD44-203ENST00000278386 NGFRP08138 427 aa11.43□□□□□ -0.58
CD44-203ENST00000278386 DDX5P17844 614 aaKnown RBP11.43□□□□□ -0.58
CD44-203ENST00000278386 ATP6V1C1P21283 382 aa11.43□□□□□ -0.58
CD44-203ENST00000278386 SFTPDP35247 375 aa11.43□□□□□ -0.58
CD44-203ENST00000278386 MAP3K8P41279 467 aa11.43□□□□□ -0.58
CD44-203ENST00000278386 ASMTP46597 345 aa11.43□□□□□ -0.58
CD44-203ENST00000278386 RAC1P63000 192 aa11.43□□□□□ -0.58
CD44-203ENST00000278386 POU6F2P78424 691 aaPredicted RBP11.43□□□□□ -0.58
CD44-203ENST00000278386 PDE7AQ13946 482 aa11.43□□□□□ -0.58
CD44-203ENST00000278386 LASP1Q14847 261 aaKnown RBP11.43□□□□□ -0.58
CD44-203ENST00000278386 CTU2Q2VPK5 515 aaKnown RBP11.43□□□□□ -0.58
CD44-203ENST00000278386 BEX5Q5H9J7 111 aa11.43□□□□□ -0.58
CD44-203ENST00000278386 KANK2Q63ZY3 851 aa11.43□□□□□ -0.58
CD44-203ENST00000278386 HBMQ6B0K9 141 aa11.43□□□□□ -0.58
CD44-203ENST00000278386 Q6ZSR9 355 aa11.43□□□□□ -0.58
CD44-203ENST00000278386 SH2D5Q6ZV89 423 aa11.43□□□□□ -0.58
CD44-203ENST00000278386 R3HCC1LQ7Z5L2 792 aaKnown RBP11.43□□□□□ -0.58
CD44-203ENST00000278386 STK32CQ86UX6 486 aa11.43□□□□□ -0.58
CD44-203ENST00000278386 TDRPQ86YL5 185 aa11.43□□□□□ -0.58
CD44-203ENST00000278386 WFDC8Q8IUA0 241 aa11.43□□□□□ -0.58
CD44-203ENST00000278386 MISPQ8IVT2 679 aa11.43□□□□□ -0.58
CD44-203ENST00000278386 OR4C3Q8NH37 302 aa11.43□□□□□ -0.58
CD44-203ENST00000278386 TWIST2Q8WVJ9 160 aa11.43□□□□□ -0.58
CD44-203ENST00000278386 HOXB13Q92826 284 aaPredicted RBP11.43□□□□□ -0.58
CD44-203ENST00000278386 ADGRG7Q96K78 797 aa11.43□□□□□ -0.58
CD44-203ENST00000278386 COX4I2Q96KJ9 171 aa11.43□□□□□ -0.58
CD44-203ENST00000278386 GATA5Q9BWX5 397 aaPredicted RBP11.43□□□□□ -0.58
CD44-203ENST00000278386 TUBB1Q9H4B7 451 aa11.43□□□□□ -0.58
CD44-203ENST00000278386 PPCSQ9HAB8 311 aa11.43□□□□□ -0.58
CD44-203ENST00000278386 ACSS1Q9NUB1 689 aaPredicted RBP11.43□□□□□ -0.58
CD44-203ENST00000278386 SNX8Q9Y5X2 465 aa11.43□□□□□ -0.58
CD44-203ENST00000278386 NSD1Q96L73 2696 aaPredicted RBP11.43□□□□□ -0.58
CD44-203ENST00000278386 TMEM233B4DJY2 109 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 LY6G6DO95868 133 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 TUBBP07437 444 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 PPP3CBP16298 524 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 LOXP28300 417 aaPredicted RBP11.42□□□□□ -0.58
CD44-203ENST00000278386 MAPK1P28482 360 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 AGTR1P30556 359 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 LCN1P31025 176 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 FRKP42685 505 aaPredicted RBP11.42□□□□□ -0.58
CD44-203ENST00000278386 SERPINB4P48594 390 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 RNF144AP50876 292 aaPredicted RBP11.42□□□□□ -0.58
CD44-203ENST00000278386 FOXF1Q12946 379 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 TP53BP2Q13625 1128 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 CD226Q15762 336 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 RFTN2Q52LD8 501 aaPredicted RBP11.42□□□□□ -0.58
CD44-203ENST00000278386 ALKBH2Q6NS38 261 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 STAC2Q6ZMT1 411 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 ZNF704Q6ZNC4 412 aaPredicted RBP11.42□□□□□ -0.58
CD44-203ENST00000278386 BEND4Q6ZU67 534 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 C22orf34Q6ZV56 151 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 ESPNLQ6ZVH7 1005 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 PLEKHM3Q6ZWE6 761 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 CIARTQ8N365 385 aaPredicted RBP11.42□□□□□ -0.58
CD44-203ENST00000278386 ZNF614Q8N883 585 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 B4GALNT2Q8NHY0 566 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 PHOSPHO1Q8TCT1 267 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 AGR3Q8TD06 166 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 ACTRT2Q8TDY3 377 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 NUDT8Q8WV74 236 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 CDS1Q92903 461 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 MTERF3Q96E29 417 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 FAM120BQ96EK7 910 aaKnown RBP11.42□□□□□ -0.58
CD44-203ENST00000278386 C16orf58Q96GQ5 468 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 REXO5Q96IC2 774 aaKnown RBP11.42□□□□□ -0.58
CD44-203ENST00000278386 APOPT1Q96IL0 206 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 MARK4Q96L34 752 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 KLHL15Q96M94 604 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 TRMOQ9BU70 441 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 BDH2Q9BUT1 245 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 ACTR6Q9GZN1 396 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 UBQLN4Q9NRR5 601 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 GLRX2Q9NS18 164 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 FBXO34Q9NWN3 711 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 GIN1Q9NXP7 522 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 DNAJC15Q9Y5T4 150 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 PRR14LQ5THK1 2151 aa11.42□□□□□ -0.58
CD44-203ENST00000278386 FREM1Q5H8C1 2179 aa11.41□□□□□ -0.58
CD44-203ENST00000278386 ROS1P08922 2347 aa11.41□□□□□ -0.58
CD44-203ENST00000278386 NPIPA5A0A0B4J1W7 369 aa11.41□□□□□ -0.58
CD44-203ENST00000278386 A0A0J9YW62 118 aa11.41□□□□□ -0.58
CD44-203ENST00000278386 A0A1W2PQD3 144 aa11.41□□□□□ -0.58
CD44-203ENST00000278386 C7orf72A4D263 438 aa11.41□□□□□ -0.58
CD44-203ENST00000278386 TRIM64A6NGJ6 449 aa11.41□□□□□ -0.58
CD44-203ENST00000278386 TRIM64BA6NI03 449 aa11.41□□□□□ -0.58
CD44-203ENST00000278386 TMEM114B3SHH9 223 aa11.41□□□□□ -0.58
CD44-203ENST00000278386 NPIPA7E9PJI5 369 aa11.41□□□□□ -0.58
CD44-203ENST00000278386 PIP5K1BO14986 540 aa11.41□□□□□ -0.58
CD44-203ENST00000278386 SCAMP2O15127 329 aaKnown RBP11.41□□□□□ -0.58
CD44-203ENST00000278386 TRIM13O60858 407 aa11.41□□□□□ -0.58
CD44-203ENST00000278386 HSPA4LO95757 839 aa11.41□□□□□ -0.58
CD44-203ENST00000278386 HMGN2P05204 90 aaKnown RBP11.41□□□□□ -0.58
CD44-203ENST00000278386 THBDP07204 575 aa11.41□□□□□ -0.58
CD44-203ENST00000278386 CHRNGP07510 517 aa11.41□□□□□ -0.58
CD44-203ENST00000278386 NPIPA8P0DM63 369 aa11.41□□□□□ -0.58
CD44-203ENST00000278386 BCKDHAP12694 445 aa11.41□□□□□ -0.58
CD44-203ENST00000278386 RPL3P39023 403 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms