RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 ROS1P08922 2347 aa13.64□□□□□ -0.23
CNOT9-201ENST00000273064 RNF13O43567 381 aa13.64□□□□□ -0.23
CNOT9-201ENST00000273064 BSGP35613 385 aa13.64□□□□□ -0.23
CNOT9-201ENST00000273064 TRIM23P36406 574 aa13.64□□□□□ -0.23
CNOT9-201ENST00000273064 ADPRHP54922 357 aa13.64□□□□□ -0.23
CNOT9-201ENST00000273064 TMEM196Q5HYL7 178 aa13.64□□□□□ -0.23
CNOT9-201ENST00000273064 HDDC2Q7Z4H3 204 aa13.64□□□□□ -0.23
CNOT9-201ENST00000273064 GTPBP2Q9BX10 602 aaKnown RBP13.64□□□□□ -0.23
CNOT9-201ENST00000273064 ZNF226Q9NYT6 803 aa13.64□□□□□ -0.23
CNOT9-201ENST00000273064 GMEB2Q9UKD1 530 aa13.64□□□□□ -0.23
CNOT9-201ENST00000273064 COQ9O75208 318 aa13.64□□□□□ -0.23
CNOT9-201ENST00000273064 UBXN7O94888 489 aa13.64□□□□□ -0.23
CNOT9-201ENST00000273064 CD3GP09693 182 aa13.64□□□□□ -0.23
CNOT9-201ENST00000273064 GIMD1P0DJR0 217 aa13.64□□□□□ -0.23
CNOT9-201ENST00000273064 MYF5P13349 255 aa13.64□□□□□ -0.23
CNOT9-201ENST00000273064 RPS27P42677 84 aaKnown RBP13.64□□□□□ -0.23
CNOT9-201ENST00000273064 ZFP36L2P47974 494 aaKnown RBP13.64□□□□□ -0.23
CNOT9-201ENST00000273064 NR0B1P51843 470 aaKnown RBP13.64□□□□□ -0.23
CNOT9-201ENST00000273064 AKIRIN2Q53H80 203 aa13.64□□□□□ -0.23
CNOT9-201ENST00000273064 NKAIN2Q5VXU1 208 aa13.64□□□□□ -0.23
CNOT9-201ENST00000273064 RPTNQ6XPR3 784 aa13.64□□□□□ -0.23
CNOT9-201ENST00000273064 ZNF765Q7L2R6 523 aa13.64□□□□□ -0.23
CNOT9-201ENST00000273064 UBE2Q1Q7Z7E8 422 aa13.64□□□□□ -0.23
CNOT9-201ENST00000273064 TMED4Q7Z7H5 227 aa13.64□□□□□ -0.23
CNOT9-201ENST00000273064 GAS2L1Q99501 681 aaPredicted RBP13.64□□□□□ -0.23
CNOT9-201ENST00000273064 PDE7BQ9NP56 450 aa13.64□□□□□ -0.23
CNOT9-201ENST00000273064 TBCCD1Q9NVR7 557 aa13.64□□□□□ -0.23
CNOT9-201ENST00000273064 GRHPRQ9UBQ7 328 aa13.64□□□□□ -0.23
CNOT9-201ENST00000273064 MKI67P46013 3256 aaKnown RBP13.64□□□□□ -0.23
CNOT9-201ENST00000273064 PAHP00439 452 aa13.64□□□□□ -0.23
CNOT9-201ENST00000273064 ZNF823P16415 610 aa13.64□□□□□ -0.23
CNOT9-201ENST00000273064 OPRD1P41143 372 aa13.64□□□□□ -0.23
CNOT9-201ENST00000273064 CSNK1EP49674 416 aaKnown RBP13.64□□□□□ -0.23
CNOT9-201ENST00000273064 OR1Q1Q15612 314 aa13.64□□□□□ -0.23
CNOT9-201ENST00000273064 PAMR1Q6UXH9 720 aa13.64□□□□□ -0.23
CNOT9-201ENST00000273064 USP51Q70EK9 711 aa13.64□□□□□ -0.23
CNOT9-201ENST00000273064 CADM3Q8N126 398 aa13.64□□□□□ -0.23
CNOT9-201ENST00000273064 SLC37A2Q8TED4 501 aa13.64□□□□□ -0.23
CNOT9-201ENST00000273064 GAL3ST3Q96A11 431 aa13.64□□□□□ -0.23
CNOT9-201ENST00000273064 TCEAL2Q9H3H9 227 aaPredicted RBP13.64□□□□□ -0.23
CNOT9-201ENST00000273064 ACSS1Q9NUB1 689 aaPredicted RBP13.64□□□□□ -0.23
CNOT9-201ENST00000273064 GRIP1Q9Y3R0 1128 aa13.64□□□□□ -0.23
CNOT9-201ENST00000273064 TNS1Q9HBL0 1735 aaKnown RBP13.64□□□□□ -0.23
CNOT9-201ENST00000273064 C2orf72A6NCS6 295 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 GPX5O75715 221 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 PEPDP12955 493 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 APEHP13798 732 aaKnown RBP13.63□□□□□ -0.23
CNOT9-201ENST00000273064 MAP2K3P46734 347 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 CTXN1P60606 82 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 ZNF613Q6PF04 617 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 LRFN4Q6PJG9 635 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 ZNF793Q6ZN11 406 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 Q6ZNX1 250 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 PRSS41Q7RTY9 318 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 MCATQ8IVS2 390 aaKnown RBP13.63□□□□□ -0.23
CNOT9-201ENST00000273064 BBS1Q8NFJ9 593 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 OR6C4Q8NGE1 309 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 OR2L8Q8NGY9 312 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 ZNF707Q96C28 371 aaPredicted RBP13.63□□□□□ -0.23
CNOT9-201ENST00000273064 METTL2AQ96IZ6 378 aaKnown RBP13.63□□□□□ -0.23
CNOT9-201ENST00000273064 HS6ST2Q96MM7 605 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 LMAN1LQ9HAT1 526 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 DOCK8Q8NF50 2099 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 GREB1Q4ZG55 1949 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 GXYLT2A0PJZ3 443 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 FLRT2O43155 660 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 CSO75390 466 aaKnown RBP13.63□□□□□ -0.23
CNOT9-201ENST00000273064 MOSPD3O75425 235 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 CPNE6O95741 557 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 DBIP07108 87 aaKnown RBP13.63□□□□□ -0.23
CNOT9-201ENST00000273064 REEP5Q00765 189 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 TFF2Q03403 129 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 CTF1Q16619 201 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 BICRALQ6AI39 1079 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 LEG1Q6P5S2 330 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 OR7G2Q8NG99 324 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 CNOT9Q92600 299 aaKnown RBP13.63□□□□□ -0.23
CNOT9-201ENST00000273064 MAP3K3Q99759 626 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 FUZQ9BT04 418 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 PINK1Q9BXM7 581 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 CD93Q9NPY3 652 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 ICKQ9UPZ9 632 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 ICE1Q9Y2F5 2266 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 SOBPA7XYQ1 873 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 GREM1O60565 184 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 PROS1P07225 676 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 HTR1AP08908 422 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 HOXA9P31269 272 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 DNASE1L1P49184 302 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 CSRP3P50461 194 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 ADAM15Q13444 863 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 CRMP1Q14194 572 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 LAS2Q8IYD9 372 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 C4orf36Q96KX1 117 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 TMEM38AQ9H6F2 299 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 LAMP5Q9UJQ1 280 aa13.63□□□□□ -0.23
CNOT9-201ENST00000273064 MRTO4Q9UKD2 239 aaKnown RBP13.63□□□□□ -0.23
CNOT9-201ENST00000273064 RBBP6Q7Z6E9 1792 aaKnown RBP13.62□□□□□ -0.23
CNOT9-201ENST00000273064 MEIS3P1A6NDR6 274 aa13.62□□□□□ -0.23
CNOT9-201ENST00000273064 CEACAM5P06731 702 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms