RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 CLEC3AO75596 197 aa25.61■■□□□ 1.69
CBX4-201ENST00000269397 TCRBP04435 133 aa25.61■■□□□ 1.69
CBX4-201ENST00000269397 RHOP08100 348 aa25.61■■□□□ 1.69
CBX4-201ENST00000269397 CISD3P0C7P0 127 aa25.61■■□□□ 1.69
CBX4-201ENST00000269397 HIST1H1TP22492 207 aaPredicted RBP25.61■■□□□ 1.69
CBX4-201ENST00000269397 RBMS1P29558 406 aaKnown RBP25.61■■□□□ 1.69
CBX4-201ENST00000269397 PRR5P85299 388 aa25.61■■□□□ 1.69
CBX4-201ENST00000269397 ARHGAP15Q53QZ3 475 aa25.61■■□□□ 1.69
CBX4-201ENST00000269397 ZNF782Q6ZMW2 699 aaPredicted RBP25.61■■□□□ 1.69
CBX4-201ENST00000269397 DPCDQ9BVM2 203 aaPredicted RBP25.61■■□□□ 1.69
CBX4-201ENST00000269397 OR51V1Q9H2C8 321 aa25.61■■□□□ 1.69
CBX4-201ENST00000269397 SYNPO2LQ9H987 977 aa25.61■■□□□ 1.69
CBX4-201ENST00000269397 KLHL28Q9NXS3 571 aa25.61■■□□□ 1.69
CBX4-201ENST00000269397 SOX30O94993 753 aa25.6■■□□□ 1.69
CBX4-201ENST00000269397 NPR2P20594 1047 aa25.6■■□□□ 1.69
CBX4-201ENST00000269397 TMEM44Q2T9K0 475 aa25.6■■□□□ 1.69
CBX4-201ENST00000269397 METRNLQ641Q3 311 aa25.6■■□□□ 1.69
CBX4-201ENST00000269397 NIPAL3Q6P499 406 aa25.6■■□□□ 1.69
CBX4-201ENST00000269397 SLC16A11Q8NCK7 471 aa25.6■■□□□ 1.69
CBX4-201ENST00000269397 COL26A1Q96A83 441 aa25.6■■□□□ 1.69
CBX4-201ENST00000269397 DPAGT1Q9H3H5 408 aa25.6■■□□□ 1.69
CBX4-201ENST00000269397 DIABLOQ9NR28 239 aa25.6■■□□□ 1.69
CBX4-201ENST00000269397 SLC35G4P0C7Q5 338 aa25.6■■□□□ 1.69
CBX4-201ENST00000269397 TRA2BP62995 288 aaKnown RBP25.6■■□□□ 1.69
CBX4-201ENST00000269397 CDC73Q6P1J9 531 aa25.6■■□□□ 1.69
CBX4-201ENST00000269397 DGLUCYQ7Z3D6 616 aa25.6■■□□□ 1.69
CBX4-201ENST00000269397 MS4A6EQ96DS6 147 aa25.6■■□□□ 1.69
CBX4-201ENST00000269397 ELP4Q96EB1 424 aa25.6■■□□□ 1.69
CBX4-201ENST00000269397 PCBD2Q9H0N5 130 aa25.6■■□□□ 1.69
CBX4-201ENST00000269397 OR52D1Q9H346 318 aa25.6■■□□□ 1.69
CBX4-201ENST00000269397 MED17Q9NVC6 651 aa25.6■■□□□ 1.69
CBX4-201ENST00000269397 C7orf66A4D0T2 115 aa25.6■■□□□ 1.69
CBX4-201ENST00000269397 EMC8O43402 210 aa25.6■■□□□ 1.69
CBX4-201ENST00000269397 HYAL3O43820 417 aaPredicted RBP25.6■■□□□ 1.69
CBX4-201ENST00000269397 ANXA3P12429 323 aa25.6■■□□□ 1.69
CBX4-201ENST00000269397 AP2S1P53680 142 aaPredicted RBP25.6■■□□□ 1.69
CBX4-201ENST00000269397 DGCR2P98153 550 aa25.6■■□□□ 1.69
CBX4-201ENST00000269397 ZNF765Q7L2R6 523 aa25.6■■□□□ 1.69
CBX4-201ENST00000269397 SIAH3Q8IW03 269 aa25.6■■□□□ 1.69
CBX4-201ENST00000269397 OR2A1Q8NGT9 310 aa25.6■■□□□ 1.69
CBX4-201ENST00000269397 SFXN5Q8TD22 340 aa25.6■■□□□ 1.69
CBX4-201ENST00000269397 PXYLP1Q8TE99 480 aa25.6■■□□□ 1.69
CBX4-201ENST00000269397 SLC35A4Q96G79 324 aa25.6■■□□□ 1.69
CBX4-201ENST00000269397 C12orf66Q96MD2 445 aa25.6■■□□□ 1.69
CBX4-201ENST00000269397 PRDM7Q9NQW5 492 aa25.6■■□□□ 1.69
CBX4-201ENST00000269397 SCN2AQ99250 2005 aa25.59■■□□□ 1.69
CBX4-201ENST00000269397 HIDE1A8MVS5 230 aa25.59■■□□□ 1.69
CBX4-201ENST00000269397 RPN2P04844 631 aa25.59■■□□□ 1.69
CBX4-201ENST00000269397 ZNF250P15622 560 aa25.59■■□□□ 1.69
CBX4-201ENST00000269397 CSNK2A2P19784 350 aaPredicted RBP25.59■■□□□ 1.69
CBX4-201ENST00000269397 FXYD6P3P58550 94 aa25.59■■□□□ 1.69
CBX4-201ENST00000269397 PRDX1Q06830 199 aaKnown RBP25.59■■□□□ 1.69
CBX4-201ENST00000269397 RPA4Q13156 261 aa25.59■■□□□ 1.69
CBX4-201ENST00000269397 CNKSR3Q6P9H4 555 aa25.59■■□□□ 1.69
CBX4-201ENST00000269397 OR4D9Q8NGE8 314 aa25.59■■□□□ 1.69
CBX4-201ENST00000269397 RANBP3Q9H6Z4 567 aaPredicted RBP25.59■■□□□ 1.69
CBX4-201ENST00000269397 HEXA-AS1Q9H8Q6 139 aa25.59■■□□□ 1.69
CBX4-201ENST00000269397 TRIM36Q9NQ86 728 aa25.59■■□□□ 1.69
CBX4-201ENST00000269397 EVA1BQ9NVM1 165 aa25.59■■□□□ 1.69
CBX4-201ENST00000269397 I3L521 148 aa25.59■■□□□ 1.69
CBX4-201ENST00000269397 J3QLW9 94 aa25.59■■□□□ 1.69
CBX4-201ENST00000269397 RAF1P04049 648 aa25.59■■□□□ 1.69
CBX4-201ENST00000269397 HMGN1P05114 100 aa25.59■■□□□ 1.69
CBX4-201ENST00000269397 ADH1AP07327 375 aa25.59■■□□□ 1.69
CBX4-201ENST00000269397 CLUP10909 449 aa25.59■■□□□ 1.69
CBX4-201ENST00000269397 ZNF19P17023 458 aa25.59■■□□□ 1.69
CBX4-201ENST00000269397 MLF2Q15773 248 aaPredicted RBP25.59■■□□□ 1.69
CBX4-201ENST00000269397 MEPCEQ7L2J0 689 aaKnown RBP25.59■■□□□ 1.69
CBX4-201ENST00000269397 GJD3Q8N144 294 aa25.59■■□□□ 1.69
CBX4-201ENST00000269397 TOMM5Q8N4H5 51 aa25.59■■□□□ 1.69
CBX4-201ENST00000269397 PFN4Q8NHR9 129 aa25.59■■□□□ 1.69
CBX4-201ENST00000269397 GANCQ8TET4 914 aa25.59■■□□□ 1.69
CBX4-201ENST00000269397 C20orf141Q9NUB4 165 aa25.59■■□□□ 1.69
CBX4-201ENST00000269397 A0A0G2JK05 382 aa25.58■■□□□ 1.69
CBX4-201ENST00000269397 SCAMP1O15126 338 aa25.58■■□□□ 1.69
CBX4-201ENST00000269397 SHOXO15266 292 aa25.58■■□□□ 1.69
CBX4-201ENST00000269397 ATP5A1P25705 553 aaKnown RBP25.58■■□□□ 1.69
CBX4-201ENST00000269397 CDS1Q92903 461 aa25.58■■□□□ 1.69
CBX4-201ENST00000269397 TOXO94900 526 aa25.58■■□□□ 1.68
CBX4-201ENST00000269397 PDGFAP04085 211 aa25.58■■□□□ 1.68
CBX4-201ENST00000269397 PRG2P13727 222 aa25.58■■□□□ 1.68
CBX4-201ENST00000269397 CCNJQ5T5M9 372 aa25.58■■□□□ 1.68
CBX4-201ENST00000269397 ABHD17CQ6PCB6 329 aa25.58■■□□□ 1.68
CBX4-201ENST00000269397 FAM111BQ6SJ93 734 aa25.58■■□□□ 1.68
CBX4-201ENST00000269397 ABHD4Q8TB40 342 aa25.58■■□□□ 1.68
CBX4-201ENST00000269397 CXorf40AQ8TE69 158 aa25.58■■□□□ 1.68
CBX4-201ENST00000269397 OR8D1Q8WZ84 308 aa25.58■■□□□ 1.68
CBX4-201ENST00000269397 CACNG6Q9BXT2 260 aa25.58■■□□□ 1.68
CBX4-201ENST00000269397 EMC7Q9NPA0 242 aa25.58■■□□□ 1.68
CBX4-201ENST00000269397 NLGN3Q9NZ94 848 aa25.58■■□□□ 1.68
CBX4-201ENST00000269397 EIF3KQ9UBQ5 218 aaKnown RBP25.58■■□□□ 1.68
CBX4-201ENST00000269397 KCNN3Q9UGI6 736 aa25.58■■□□□ 1.68
CBX4-201ENST00000269397 TMEM5Q9Y2B1 443 aa25.58■■□□□ 1.68
CBX4-201ENST00000269397 OR1A2Q9Y585 309 aa25.58■■□□□ 1.68
CBX4-201ENST00000269397 NFATC1O95644 943 aa25.57■■□□□ 1.68
CBX4-201ENST00000269397 GKN3PP0CG01 181 aa25.57■■□□□ 1.68
CBX4-201ENST00000269397 ZNF81P51508 661 aa25.57■■□□□ 1.68
CBX4-201ENST00000269397 CAMK1Q14012 370 aa25.57■■□□□ 1.68
CBX4-201ENST00000269397 ZNF687Q8N1G0 1237 aa25.57■■□□□ 1.68
CBX4-201ENST00000269397 ADAMTS15Q8TE58 950 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms