RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 NUP107P57740 925 aa15.08■□□□□ 0
TPM1-201ENST00000267996 RAB15P59190 212 aa15.08■□□□□ 0
TPM1-201ENST00000267996 TUBA4AP68366 448 aa15.08■□□□□ 0
TPM1-201ENST00000267996 PSPHP78330 225 aa15.08■□□□□ 0
TPM1-201ENST00000267996 LSM11P83369 360 aaKnown RBP eCLIP15.08■□□□□ 03e-11■■■■□ 21.7
TPM1-201ENST00000267996 TCF15Q12870 199 aa15.08■□□□□ 0
TPM1-201ENST00000267996 CDK5R2Q13319 367 aa15.08■□□□□ 0
TPM1-201ENST00000267996 OR1Q1Q15612 314 aa15.08■□□□□ 0
TPM1-201ENST00000267996 MEP1AQ16819 746 aa15.08■□□□□ 0
TPM1-201ENST00000267996 ISXQ2M1V0 245 aa15.08■□□□□ 0
TPM1-201ENST00000267996 FNDC7Q5VTL7 733 aa15.08■□□□□ 0
TPM1-201ENST00000267996 HLA-DQA1Q5Y7H0 255 aa15.08■□□□□ 0
TPM1-201ENST00000267996 NKAIN4Q8IVV8 208 aa15.08■□□□□ 0
TPM1-201ENST00000267996 APCDD1LQ8NCL9 501 aa15.08■□□□□ 0
TPM1-201ENST00000267996 EFHD2Q96C19 240 aaPredicted RBP15.08■□□□□ 0
TPM1-201ENST00000267996 HSPBAP1Q96EW2 488 aa15.08■□□□□ 0
TPM1-201ENST00000267996 GAL3ST4Q96RP7 486 aa15.08■□□□□ 0
TPM1-201ENST00000267996 PRSS27Q9BQR3 290 aa15.08■□□□□ 0
TPM1-201ENST00000267996 ZNF559Q9BR84 538 aa15.08■□□□□ 0
TPM1-201ENST00000267996 MESP1Q9BRJ9 268 aa15.08■□□□□ 0
TPM1-201ENST00000267996 ULBP3Q9BZM4 244 aa15.08■□□□□ 0
TPM1-201ENST00000267996 PARD6AQ9NPB6 346 aa15.08■□□□□ 0
TPM1-201ENST00000267996 UBQLN4Q9NRR5 601 aa15.08■□□□□ 0
TPM1-201ENST00000267996 TUBA8Q9NY65 449 aaPredicted RBP15.08■□□□□ 0
TPM1-201ENST00000267996 MRTO4Q9UKD2 239 aaKnown RBP15.08■□□□□ 0
TPM1-201ENST00000267996 LOXL2Q9Y4K0 774 aa15.08■□□□□ 0
TPM1-201ENST00000267996 TSPAN2O60636 221 aa15.07■□□□□ 0
TPM1-201ENST00000267996 CLPTM1O96005 669 aa15.07■□□□□ 0
TPM1-201ENST00000267996 TP53P04637 393 aaPredicted RBP15.07■□□□□ 0
TPM1-201ENST00000267996 ITIH1P19827 911 aa15.07■□□□□ 0
TPM1-201ENST00000267996 ETV5P41161 510 aa15.07■□□□□ 0
TPM1-201ENST00000267996 RNF144AP50876 292 aaPredicted RBP15.07■□□□□ 0
TPM1-201ENST00000267996 CRISP1P54107 249 aa15.07■□□□□ 0
TPM1-201ENST00000267996 ALDH6A1Q02252 535 aaKnown RBP15.07■□□□□ 0
TPM1-201ENST00000267996 TARDBPQ13148 414 aaKnown RBP eCLIP15.07■□□□□ 0
TPM1-201ENST00000267996 MAD2L1BPQ15013 274 aaPredicted RBP15.07■□□□□ 0
TPM1-201ENST00000267996 ZNF613Q6PF04 617 aa15.07■□□□□ 0
TPM1-201ENST00000267996 PAPD4Q6PIY7 484 aaKnown RBP15.07■□□□□ 0
TPM1-201ENST00000267996 Q6ZPB1 254 aaPredicted RBP15.07■□□□□ 0
TPM1-201ENST00000267996 CPEB2Q7Z5Q1 589 aaKnown RBP15.07■□□□□ 0
TPM1-201ENST00000267996 ZNF614Q8N883 585 aa15.07■□□□□ 0
TPM1-201ENST00000267996 FAM71CQ8NEG0 241 aa15.07■□□□□ 0
TPM1-201ENST00000267996 ZNF566Q969W8 418 aa15.07■□□□□ 0
TPM1-201ENST00000267996 TP53INP1Q96A56 240 aa15.07■□□□□ 0
TPM1-201ENST00000267996 LIN37Q96GY3 246 aaPredicted RBP15.07■□□□□ 0
TPM1-201ENST00000267996 TOR4AQ9NXH8 423 aa15.07■□□□□ 0
TPM1-201ENST00000267996 B3GALT1Q9Y5Z6 326 aa15.07■□□□□ 0
TPM1-201ENST00000267996 LOC102723996A0A087X1L8 192 aa15.06■□□□□ 0
TPM1-201ENST00000267996 ZAR1LA6NP61 321 aa15.06■□□□□ 0
TPM1-201ENST00000267996 ADAM11O75078 769 aa15.06■□□□□ 0
TPM1-201ENST00000267996 TBXA2RP21731 343 aa15.06■□□□□ 0
TPM1-201ENST00000267996 TGM1P22735 817 aa15.06■□□□□ 0
TPM1-201ENST00000267996 CHMP24386 653 aa15.06■□□□□ 0
TPM1-201ENST00000267996 CRHBPP24387 322 aa15.06■□□□□ 0
TPM1-201ENST00000267996 IFNGR2P38484 337 aa15.06■□□□□ 0
TPM1-201ENST00000267996 HLCSP50747 726 aa15.06■□□□□ 0
TPM1-201ENST00000267996 NR0B1P51843 470 aaKnown RBP15.06■□□□□ 0
TPM1-201ENST00000267996 RNF4P78317 190 aa15.06■□□□□ 0
TPM1-201ENST00000267996 IL5RAQ01344 420 aa15.06■□□□□ 0
TPM1-201ENST00000267996 TOP3AQ13472 1001 aaPredicted RBP15.06■□□□□ 0
TPM1-201ENST00000267996 DCAF12Q5T6F0 453 aa15.06■□□□□ 0
TPM1-201ENST00000267996 ZNF550Q7Z398 422 aa15.06■□□□□ 0
TPM1-201ENST00000267996 PIP4P1Q86T03 277 aa15.06■□□□□ 0
TPM1-201ENST00000267996 SLC34A3Q8N130 599 aa15.06■□□□□ 0
TPM1-201ENST00000267996 LSMEM1Q8N8F7 131 aa15.06■□□□□ 0
TPM1-201ENST00000267996 PRSS33Q8NF86 280 aa15.06■□□□□ 0
TPM1-201ENST00000267996 MR1Q95460 341 aa15.06■□□□□ 0
TPM1-201ENST00000267996 GPA33Q99795 319 aa15.06■□□□□ 0
TPM1-201ENST00000267996 ZPBPQ9BS86 351 aa15.06■□□□□ 0
TPM1-201ENST00000267996 NRSN2Q9GZP1 204 aa15.06■□□□□ 0
TPM1-201ENST00000267996 FLRT3Q9NZU0 649 aa15.06■□□□□ 0
TPM1-201ENST00000267996 C19orf25Q9UFG5 118 aaPredicted RBP15.06■□□□□ 0
TPM1-201ENST00000267996 GPN3Q9UHW5 284 aaPredicted RBP15.06■□□□□ 0
TPM1-201ENST00000267996 SLC7A7Q9UM01 511 aa15.06■□□□□ 0
TPM1-201ENST00000267996 SLC35A3Q9Y2D2 325 aa15.06■□□□□ 0
TPM1-201ENST00000267996 PCNX2A6NKB5 2137 aa15.06■□□□□ 0
TPM1-201ENST00000267996 A0A087WXM4 84 aa15.06■□□□□ 0
TPM1-201ENST00000267996 C9J4A7 227 aa15.06■□□□□ 0
TPM1-201ENST00000267996 ABCB7O75027 752 aa15.06■□□□□ 0
TPM1-201ENST00000267996 UTS2O95399 124 aa15.06■□□□□ 0
TPM1-201ENST00000267996 NGFRP08138 427 aa15.06■□□□□ 0
TPM1-201ENST00000267996 CCDC159P0C7I6 412 aa15.06■□□□□ 0
TPM1-201ENST00000267996 RPL5P46777 297 aaKnown RBP15.06■□□□□ 0
TPM1-201ENST00000267996 OMPP47874 163 aa15.06■□□□□ 0
TPM1-201ENST00000267996 GSSP48637 474 aa15.06■□□□□ 0
TPM1-201ENST00000267996 CDH15P55291 814 aa15.06■□□□□ 0
TPM1-201ENST00000267996 CXCR4P61073 352 aa15.06■□□□□ 0
TPM1-201ENST00000267996 PTGES3Q15185 160 aaKnown RBP15.06■□□□□ 0
TPM1-201ENST00000267996 FAM199XQ6PEV8 388 aaPredicted RBP15.06■□□□□ 0
TPM1-201ENST00000267996 ZNF730Q6ZMV8 503 aa15.06■□□□□ 0
TPM1-201ENST00000267996 MBOAT2Q6ZWT7 520 aa15.06■□□□□ 0
TPM1-201ENST00000267996 RAB11FIP2Q7L804 512 aa15.06■□□□□ 0
TPM1-201ENST00000267996 PRICKLE2Q7Z3G6 844 aa15.06■□□□□ 0
TPM1-201ENST00000267996 APLFQ8IW19 511 aaPredicted RBP15.06■□□□□ 0
TPM1-201ENST00000267996 ZNF527Q8NB42 609 aa15.06■□□□□ 0
TPM1-201ENST00000267996 OR8K3Q8NH51 312 aa15.06■□□□□ 0
TPM1-201ENST00000267996 NUBPLQ8TB37 319 aa15.06■□□□□ 0
TPM1-201ENST00000267996 GNPDA2Q8TDQ7 276 aa15.06■□□□□ 0
TPM1-201ENST00000267996 VMP1Q96GC9 406 aa15.06■□□□□ 0
TPM1-201ENST00000267996 LPAR4Q99677 370 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms