RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 FURINP09958 794 aa12.27□□□□□ -0.45
NUP54-201ENST00000264883 TYRP14679 529 aa12.27□□□□□ -0.45
NUP54-201ENST00000264883 CSF2RAP15509 400 aa12.27□□□□□ -0.45
NUP54-201ENST00000264883 GALP22466 123 aa12.27□□□□□ -0.45
NUP54-201ENST00000264883 SPINT3P49223 89 aa12.27□□□□□ -0.45
NUP54-201ENST00000264883 SMAD3P84022 425 aaKnown RBP12.27□□□□□ -0.45
NUP54-201ENST00000264883 CDK5Q00535 292 aa12.27□□□□□ -0.45
NUP54-201ENST00000264883 ACSM1Q08AH1 577 aa12.27□□□□□ -0.45
NUP54-201ENST00000264883 KLF9Q13886 244 aaPredicted RBP12.27□□□□□ -0.45
NUP54-201ENST00000264883 SERTAD2Q14140 314 aa12.27□□□□□ -0.45
NUP54-201ENST00000264883 NDUFA9Q16795 377 aa12.27□□□□□ -0.45
NUP54-201ENST00000264883 ZNF385BQ569K4 471 aa12.27□□□□□ -0.45
NUP54-201ENST00000264883 REEP3Q6NUK4 255 aa12.27□□□□□ -0.45
NUP54-201ENST00000264883 TCTN3Q6NUS6 607 aa12.27□□□□□ -0.45
NUP54-201ENST00000264883 KIAA1211LQ6NV74 962 aa12.27□□□□□ -0.45
NUP54-201ENST00000264883 SFXN4Q6P4A7 337 aa12.27□□□□□ -0.45
NUP54-201ENST00000264883 TMEM88Q6PEY1 159 aa12.27□□□□□ -0.45
NUP54-201ENST00000264883 TMEM17Q86X19 198 aa12.27□□□□□ -0.45
NUP54-201ENST00000264883 LINC00471Q8N535 108 aa12.27□□□□□ -0.45
NUP54-201ENST00000264883 FAM71CQ8NEG0 241 aa12.27□□□□□ -0.45
NUP54-201ENST00000264883 OR11G2Q8NGC1 345 aa12.27□□□□□ -0.45
NUP54-201ENST00000264883 OR6S1Q8NH40 331 aa12.27□□□□□ -0.45
NUP54-201ENST00000264883 APOBEC4Q8WW27 367 aaKnown RBP12.27□□□□□ -0.45
NUP54-201ENST00000264883 PIGKQ92643 395 aa12.27□□□□□ -0.45
NUP54-201ENST00000264883 WBP2Q969T9 261 aa12.27□□□□□ -0.45
NUP54-201ENST00000264883 PPP1R16AQ96I34 528 aa12.27□□□□□ -0.45
NUP54-201ENST00000264883 IFT27Q9BW83 186 aa12.27□□□□□ -0.45
NUP54-201ENST00000264883 TMEM121BQ9BXQ6 578 aaPredicted RBP12.27□□□□□ -0.45
NUP54-201ENST00000264883 CPEB1Q9BZB8 566 aaKnown RBP12.27□□□□□ -0.45
NUP54-201ENST00000264883 OR10A4Q9H209 315 aa12.27□□□□□ -0.45
NUP54-201ENST00000264883 LRRN3Q9H3W5 708 aa12.27□□□□□ -0.45
NUP54-201ENST00000264883 PRM3Q9NNZ6 103 aa12.27□□□□□ -0.45
NUP54-201ENST00000264883 EXOSC3Q9NQT5 275 aaKnown RBP12.27□□□□□ -0.45
NUP54-201ENST00000264883 STOX2Q9P2F5 926 aaPredicted RBP12.27□□□□□ -0.45
NUP54-201ENST00000264883 CLEC4AQ9UMR7 237 aa12.27□□□□□ -0.45
NUP54-201ENST00000264883 DENND4AQ7Z401 1863 aa12.27□□□□□ -0.45
NUP54-201ENST00000264883 A0A1B0GUH1 482 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 SEMA7AO75326 666 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 SH3BGRLO75368 114 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 ATG12O94817 140 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 UBL3O95164 117 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 ZNF8P17098 575 aaPredicted RBP12.26□□□□□ -0.45
NUP54-201ENST00000264883 PVALBP20472 110 aaPredicted RBP12.26□□□□□ -0.45
NUP54-201ENST00000264883 RFC3P40938 356 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 SHC2P98077 582 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 SLC5A12Q1EHB4 618 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 Q6ZNB5 142 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 KLBQ86Z14 1044 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 SAMD14Q8IZD0 417 aaPredicted RBP12.26□□□□□ -0.45
NUP54-201ENST00000264883 APCDD1Q8J025 514 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 C12orf45Q8N5I9 185 aaPredicted RBP12.26□□□□□ -0.45
NUP54-201ENST00000264883 OR51Q1Q8NH59 317 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 GNPDA2Q8TDQ7 276 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 MRPS31Q92665 395 aaKnown RBP12.26□□□□□ -0.45
NUP54-201ENST00000264883 WDR34Q96EX3 536 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 WDR89Q96FK6 387 aaPredicted RBP12.26□□□□□ -0.45
NUP54-201ENST00000264883 NARS2Q96I59 477 aaKnown RBP12.26□□□□□ -0.45
NUP54-201ENST00000264883 IGSF21Q96ID5 467 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 EFCAB11Q9BUY7 163 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 SUV39H2Q9H5I1 410 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 EPHA6Q9UF33 1036 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 DPP7Q9UHL4 492 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 GPN3Q9UHW5 284 aaPredicted RBP12.26□□□□□ -0.45
NUP54-201ENST00000264883 KIAA1671Q9BY89 1806 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 CCDC88CQ9P219 2028 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 A0A0B4J203 849 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 OR2M5A3KFT3 312 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 SLC9B1P1A6NJY1 282 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 RNF13O43567 381 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 NDUFS6O75380 124 aaKnown RBP12.26□□□□□ -0.45
NUP54-201ENST00000264883 ETHE1O95571 254 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 HIST1H2ABP04908 130 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 EPHX1P07099 455 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 UQCRC2P22695 453 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 SHC1P29353 583 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 OR10A3P58181 314 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 DEFB103AP81534 67 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 E2F1Q01094 437 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 NAE1Q13564 534 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 DYRK1AQ13627 763 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 ZNF660Q6AZW8 331 aaPredicted RBP12.26□□□□□ -0.45
NUP54-201ENST00000264883 SLC30A6Q6NXT4 461 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 FIP1L1Q6UN15 594 aaKnown RBP12.26□□□□□ -0.45
NUP54-201ENST00000264883 HIST3H2AQ7L7L0 130 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 MEIOBQ8N635 442 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 OR4F15Q8NGB8 312 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 SLC7A13Q8TCU3 470 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 WFDC5Q8TCV5 224 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 HIST1H2ACQ93077 130 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 FUZQ9BT04 418 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 MVB12BQ9H7P6 319 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 TAS2R3Q9NYW6 316 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 ZNF69Q9UC07 566 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 ICKQ9UPZ9 632 aa12.26□□□□□ -0.45
NUP54-201ENST00000264883 HMSDA8MTL9 139 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 ZNF821O75541 412 aaPredicted RBP12.25□□□□□ -0.45
NUP54-201ENST00000264883 RB1P06400 928 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 ACAA1P09110 424 aaPredicted RBP12.25□□□□□ -0.45
NUP54-201ENST00000264883 SLC6A11P48066 632 aa12.25□□□□□ -0.45
NUP54-201ENST00000264883 KCNJ3P48549 501 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms