RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 UBQLN4Q9NRR5 601 aa16.74■□□□□ 0.27
SDF4-201ENST00000263741 RYDENQ9NUL5 291 aaKnown RBP16.74■□□□□ 0.27
SDF4-201ENST00000263741 BOKQ9UMX3 212 aaPredicted RBP16.74■□□□□ 0.27
SDF4-201ENST00000263741 NPIPA1Q9UND3 350 aa16.74■□□□□ 0.27
SDF4-201ENST00000263741 ABCG2Q9UNQ0 655 aa16.74■□□□□ 0.27
SDF4-201ENST00000263741 EVPLLA8MZ36 301 aa16.73■□□□□ 0.27
SDF4-201ENST00000263741 KIAA0513O60268 411 aa16.73■□□□□ 0.27
SDF4-201ENST00000263741 GLSO94925 669 aaPredicted RBP16.73■□□□□ 0.27
SDF4-201ENST00000263741 AK1P00568 194 aa16.73■□□□□ 0.27
SDF4-201ENST00000263741 TCEA1P23193 301 aaKnown RBP16.73■□□□□ 0.27
SDF4-201ENST00000263741 HSF1Q00613 529 aa16.73■□□□□ 0.27
SDF4-201ENST00000263741 FADDQ13158 208 aa16.73■□□□□ 0.27
SDF4-201ENST00000263741 IGFBP7Q16270 282 aa16.73■□□□□ 0.27
SDF4-201ENST00000263741 MAPK14Q16539 360 aa16.73■□□□□ 0.27
SDF4-201ENST00000263741 GCNT6Q5T4J0 391 aa16.73■□□□□ 0.27
SDF4-201ENST00000263741 TMEM81Q6P7N7 255 aa16.73■□□□□ 0.27
SDF4-201ENST00000263741 DNAJB8Q8NHS0 232 aa16.73■□□□□ 0.27
SDF4-201ENST00000263741 NR4A3Q92570 626 aa16.73■□□□□ 0.27
SDF4-201ENST00000263741 NTNG2Q96CW9 530 aa16.73■□□□□ 0.27
SDF4-201ENST00000263741 KLHDC3Q9BQ90 382 aa16.73■□□□□ 0.27
SDF4-201ENST00000263741 ECSITQ9BQ95 431 aa16.73■□□□□ 0.27
SDF4-201ENST00000263741 DEFB127Q9H1M4 99 aa16.73■□□□□ 0.27
SDF4-201ENST00000263741 S100A14Q9HCY8 104 aa16.73■□□□□ 0.27
SDF4-201ENST00000263741 ZFP64Q9NPA5 681 aa16.73■□□□□ 0.27
SDF4-201ENST00000263741 FBXL2Q9UKC9 423 aa16.73■□□□□ 0.27
SDF4-201ENST00000263741 USP22Q9UPT9 525 aa16.73■□□□□ 0.27
SDF4-201ENST00000263741 LIPGQ9Y5X9 500 aa16.73■□□□□ 0.27
SDF4-201ENST00000263741 NPIPB9F8W1W9 429 aa16.73■□□□□ 0.27
SDF4-201ENST00000263741 SCDO00767 359 aa16.73■□□□□ 0.27
SDF4-201ENST00000263741 SNPHO15079 494 aa16.73■□□□□ 0.27
SDF4-201ENST00000263741 SNX4O95219 450 aa16.73■□□□□ 0.27
SDF4-201ENST00000263741 ANGPTL1O95841 491 aa16.73■□□□□ 0.27
SDF4-201ENST00000263741 TFPTP0C1Z6 253 aa16.73■□□□□ 0.27
SDF4-201ENST00000263741 HPGDP15428 266 aa16.73■□□□□ 0.27
SDF4-201ENST00000263741 GPX2P18283 190 aa16.73■□□□□ 0.27
SDF4-201ENST00000263741 TBXA2RP21731 343 aa16.73■□□□□ 0.27
SDF4-201ENST00000263741 PPIBP23284 216 aaKnown RBP16.73■□□□□ 0.27
SDF4-201ENST00000263741 ZNF324BQ6AW86 544 aaPredicted RBP16.73■□□□□ 0.27
SDF4-201ENST00000263741 SIAH3Q8IW03 269 aa16.73■□□□□ 0.27
SDF4-201ENST00000263741 NFKBIDQ8NI38 313 aa16.73■□□□□ 0.27
SDF4-201ENST00000263741 TMEM41AQ96HV5 264 aa16.73■□□□□ 0.27
SDF4-201ENST00000263741 TSC22D3Q99576 134 aa16.73■□□□□ 0.27
SDF4-201ENST00000263741 RAD21L1Q9H4I0 556 aa16.73■□□□□ 0.27
SDF4-201ENST00000263741 SLC24A3Q9HC58 644 aa16.73■□□□□ 0.27
SDF4-201ENST00000263741 PPP4R1LQ9P1A2 415 aa16.73■□□□□ 0.27
SDF4-201ENST00000263741 GMPR2Q9P2T1 348 aaKnown RBP16.73■□□□□ 0.27
SDF4-201ENST00000263741 OIP5O43482 229 aa16.72■□□□□ 0.27
SDF4-201ENST00000263741 CDC40O60508 579 aaKnown RBP eCLIP16.72■□□□□ 0.27
SDF4-201ENST00000263741 UGT2B17O75795 530 aa16.72■□□□□ 0.27
SDF4-201ENST00000263741 PDE9AO76083 593 aa16.72■□□□□ 0.27
SDF4-201ENST00000263741 BMP2P12643 396 aa16.72■□□□□ 0.27
SDF4-201ENST00000263741 GDF1P27539 372 aa16.72■□□□□ 0.27
SDF4-201ENST00000263741 TDGF1P3P51864 188 aa16.72■□□□□ 0.27
SDF4-201ENST00000263741 SLC25A3Q00325 362 aa16.72■□□□□ 0.27
SDF4-201ENST00000263741 C19orf57Q0VDD7 668 aa16.72■□□□□ 0.27
SDF4-201ENST00000263741 SNTA1Q13424 505 aa16.72■□□□□ 0.27
SDF4-201ENST00000263741 CYP51A1Q16850 503 aa16.72■□□□□ 0.27
SDF4-201ENST00000263741 ZNF619Q8N2I2 560 aa16.72■□□□□ 0.27
SDF4-201ENST00000263741 OR1J4Q8NGS1 313 aa16.72■□□□□ 0.27
SDF4-201ENST00000263741 OR10A6Q8NH74 314 aa16.72■□□□□ 0.27
SDF4-201ENST00000263741 DUSP19Q8WTR2 217 aa16.72■□□□□ 0.27
SDF4-201ENST00000263741 SH3YL1Q96HL8 342 aaPredicted RBP16.72■□□□□ 0.27
SDF4-201ENST00000263741 TRNT1Q96Q11 434 aaKnown RBP16.72■□□□□ 0.27
SDF4-201ENST00000263741 CLDN24A6NM45 220 aa16.71■□□□□ 0.27
SDF4-201ENST00000263741 ALG1L2C9J202 215 aa16.71■□□□□ 0.27
SDF4-201ENST00000263741 ACOT7O00154 380 aa16.71■□□□□ 0.27
SDF4-201ENST00000263741 SOX30O94993 753 aa16.71■□□□□ 0.27
SDF4-201ENST00000263741 CRYABP02511 175 aaKnown RBP16.71■□□□□ 0.27
SDF4-201ENST00000263741 PEX19P40855 299 aa16.71■□□□□ 0.27
SDF4-201ENST00000263741 ATP12AP54707 1039 aa16.71■□□□□ 0.27
SDF4-201ENST00000263741 TOMM20Q15388 145 aa16.71■□□□□ 0.27
SDF4-201ENST00000263741 ADRM1Q16186 407 aa16.71■□□□□ 0.27
SDF4-201ENST00000263741 TIGD3Q6B0B8 471 aa16.71■□□□□ 0.27
SDF4-201ENST00000263741 SLX1AQ9BQ83 275 aa16.71■□□□□ 0.27
SDF4-201ENST00000263741 KAT8Q9H7Z6 458 aaKnown RBP16.71■□□□□ 0.27
SDF4-201ENST00000263741 A4GALTQ9NPC4 353 aa16.71■□□□□ 0.27
SDF4-201ENST00000263741 AGPAT4Q9NRZ5 378 aa16.71■□□□□ 0.27
SDF4-201ENST00000263741 MED11Q9P086 117 aa16.71■□□□□ 0.27
SDF4-201ENST00000263741 LIPT1Q9Y234 373 aa16.71■□□□□ 0.27
SDF4-201ENST00000263741 GMEB1Q9Y692 573 aa16.71■□□□□ 0.27
SDF4-201ENST00000263741 ESPL1Q14674 2120 aa16.71■□□□□ 0.27
SDF4-201ENST00000263741 NDUFB5O43674 189 aa16.71■□□□□ 0.27
SDF4-201ENST00000263741 BCAS1O75363 584 aaPredicted RBP16.71■□□□□ 0.27
SDF4-201ENST00000263741 SLC6A2P23975 617 aa16.71■□□□□ 0.27
SDF4-201ENST00000263741 AQP1P29972 269 aa16.71■□□□□ 0.27
SDF4-201ENST00000263741 SLC22A16Q86VW1 577 aa16.71■□□□□ 0.27
SDF4-201ENST00000263741 LSRQ86X29 649 aaPredicted RBP16.71■□□□□ 0.27
SDF4-201ENST00000263741 PTOV1Q86YD1 416 aa16.71■□□□□ 0.27
SDF4-201ENST00000263741 PHOSPHO1Q8TCT1 267 aa16.71■□□□□ 0.27
SDF4-201ENST00000263741 BARD1Q99728 777 aaKnown RBP16.71■□□□□ 0.27
SDF4-201ENST00000263741 TREX2Q9BQ50 279 aaPredicted RBP16.71■□□□□ 0.27
SDF4-201ENST00000263741 FAM192AQ9GZU8 254 aa16.71■□□□□ 0.27
SDF4-201ENST00000263741 EFCAB1Q9HAE3 211 aa16.71■□□□□ 0.27
SDF4-201ENST00000263741 GID8Q9NWU2 228 aa16.71■□□□□ 0.27
SDF4-201ENST00000263741 CORO2BQ9UQ03 480 aa16.71■□□□□ 0.27
SDF4-201ENST00000263741 AHCYL1O43865 530 aa16.7■□□□□ 0.26
SDF4-201ENST00000263741 NGFRP08138 427 aa16.7■□□□□ 0.26
SDF4-201ENST00000263741 ARAFP10398 606 aa16.7■□□□□ 0.26
SDF4-201ENST00000263741 TXNL4AP83876 142 aaKnown RBP16.7■□□□□ 0.26
SDF4-201ENST00000263741 ART3Q13508 389 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms