RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 TEX12Q9BXU0 123 aa15.22■□□□□ 0.03
TM9SF1-201ENST00000261789 MTHFD2LQ9H903 347 aaPredicted RBP15.22■□□□□ 0.03
TM9SF1-201ENST00000261789 ADAP2Q9NPF8 381 aa15.22■□□□□ 0.03
TM9SF1-201ENST00000261789 RBFOX1Q9NWB1 397 aaKnown RBP15.22■□□□□ 0.03
TM9SF1-201ENST00000261789 NLGN3Q9NZ94 848 aa15.22■□□□□ 0.03
TM9SF1-201ENST00000261789 KNL1Q8NG31 2342 aa15.22■□□□□ 0.03
TM9SF1-201ENST00000261789 H0Y8X5 98 aa15.22■□□□□ 0.03
TM9SF1-201ENST00000261789 GTPBP1O00178 669 aaKnown RBP15.22■□□□□ 0.03
TM9SF1-201ENST00000261789 RNF13O43567 381 aa15.22■□□□□ 0.03
TM9SF1-201ENST00000261789 LDB3O75112 727 aa15.22■□□□□ 0.03
TM9SF1-201ENST00000261789 CLUP10909 449 aa15.22■□□□□ 0.03
TM9SF1-201ENST00000261789 C5AR1P21730 350 aa15.22■□□□□ 0.03
TM9SF1-201ENST00000261789 ALAS2P22557 587 aa15.22■□□□□ 0.03
TM9SF1-201ENST00000261789 RPS21P63220 83 aaKnown RBP15.22■□□□□ 0.03
TM9SF1-201ENST00000261789 RUNX2Q13950 521 aa15.22■□□□□ 0.03
TM9SF1-201ENST00000261789 CDC73Q6P1J9 531 aa15.22■□□□□ 0.03
TM9SF1-201ENST00000261789 FBXO42Q6P3S6 717 aa15.22■□□□□ 0.03
TM9SF1-201ENST00000261789 TMEM43Q9BTV4 400 aa15.22■□□□□ 0.03
TM9SF1-201ENST00000261789 ALG8Q9BVK2 526 aa15.22■□□□□ 0.03
TM9SF1-201ENST00000261789 ANKRD19PQ9H560 264 aa15.22■□□□□ 0.03
TM9SF1-201ENST00000261789 KCNE5Q9UJ90 142 aa15.22■□□□□ 0.03
TM9SF1-201ENST00000261789 PRUNE2Q8WUY3 3088 aa15.21■□□□□ 0.03
TM9SF1-201ENST00000261789 TBC1D3DA0A087WVF3 549 aa15.21■□□□□ 0.03
TM9SF1-201ENST00000261789 TBC1D3IA0A087WXS9 549 aa15.21■□□□□ 0.03
TM9SF1-201ENST00000261789 TBC1D3EA0A087X179 549 aa15.21■□□□□ 0.03
TM9SF1-201ENST00000261789 TBC1D3KA0A087X1G2 549 aa15.21■□□□□ 0.03
TM9SF1-201ENST00000261789 TBC1D3FA6NER0 549 aaPredicted RBP15.21■□□□□ 0.03
TM9SF1-201ENST00000261789 TBC1D3LB9A6J9 549 aa15.21■□□□□ 0.03
TM9SF1-201ENST00000261789 J3QRE1 110 aa15.21■□□□□ 0.03
TM9SF1-201ENST00000261789 CHST10O43529 356 aa15.21■□□□□ 0.03
TM9SF1-201ENST00000261789 LANCL1O43813 399 aa15.21■□□□□ 0.03
TM9SF1-201ENST00000261789 OR5F1O95221 314 aa15.21■□□□□ 0.03
TM9SF1-201ENST00000261789 TBC1D3HP0C7X1 549 aa15.21■□□□□ 0.03
TM9SF1-201ENST00000261789 TRAPPC2P0DI81 140 aa15.21■□□□□ 0.03
TM9SF1-201ENST00000261789 TRAPPC2BP0DI82 140 aa15.21■□□□□ 0.03
TM9SF1-201ENST00000261789 TEAD1P28347 426 aa15.21■□□□□ 0.03
TM9SF1-201ENST00000261789 SHC1P29353 583 aa15.21■□□□□ 0.03
TM9SF1-201ENST00000261789 MLLT3P42568 568 aaPredicted RBP15.21■□□□□ 0.03
TM9SF1-201ENST00000261789 OR10A3P58181 314 aa15.21■□□□□ 0.03
TM9SF1-201ENST00000261789 ZNF57Q68EA5 555 aaPredicted RBP15.21■□□□□ 0.03
TM9SF1-201ENST00000261789 TBC1D3GQ6DHY5 549 aa15.21■□□□□ 0.03
TM9SF1-201ENST00000261789 TBC1D3CQ6IPX1 549 aa15.21■□□□□ 0.03
TM9SF1-201ENST00000261789 THSD4Q6ZMP0 1018 aa15.21■□□□□ 0.03
TM9SF1-201ENST00000261789 PRSS41Q7RTY9 318 aa15.21■□□□□ 0.03
TM9SF1-201ENST00000261789 PAQR7Q86WK9 346 aa15.21■□□□□ 0.03
TM9SF1-201ENST00000261789 TBC1D3Q8IZP1 549 aaPredicted RBP15.21■□□□□ 0.03
TM9SF1-201ENST00000261789 OR10H4Q8NGA5 316 aa15.21■□□□□ 0.03
TM9SF1-201ENST00000261789 OR52N1Q8NH53 320 aa15.21■□□□□ 0.03
TM9SF1-201ENST00000261789 KXD1Q9BQD3 176 aa15.21■□□□□ 0.03
TM9SF1-201ENST00000261789 SARGQ9BW04 601 aa15.21■□□□□ 0.03
TM9SF1-201ENST00000261789 C1QTNF2Q9BXJ5 285 aa15.21■□□□□ 0.03
TM9SF1-201ENST00000261789 OR51V1Q9H2C8 321 aa15.21■□□□□ 0.03
TM9SF1-201ENST00000261789 CAPN10Q9HC96 672 aa15.21■□□□□ 0.03
TM9SF1-201ENST00000261789 KCMF1Q9P0J7 381 aa15.21■□□□□ 0.03
TM9SF1-201ENST00000261789 PRKAG2Q9UGJ0 569 aa15.21■□□□□ 0.03
TM9SF1-201ENST00000261789 FBXL4Q9UKA2 621 aa15.21■□□□□ 0.03
TM9SF1-201ENST00000261789 DUXAA6NLW8 204 aa15.21■□□□□ 0.02
TM9SF1-201ENST00000261789 HCN1O60741 890 aa15.21■□□□□ 0.02
TM9SF1-201ENST00000261789 CTSVO60911 334 aa15.21■□□□□ 0.02
TM9SF1-201ENST00000261789 YES1P07947 543 aa15.21■□□□□ 0.02
TM9SF1-201ENST00000261789 FAM157BP0CG42 384 aa15.21■□□□□ 0.02
TM9SF1-201ENST00000261789 IFI30P13284 250 aa15.21■□□□□ 0.02
TM9SF1-201ENST00000261789 PAICSP22234 425 aaKnown RBP15.21■□□□□ 0.02
TM9SF1-201ENST00000261789 EEF1A1P68104 462 aaKnown RBP15.21■□□□□ 0.02
TM9SF1-201ENST00000261789 SYCE2Q6PIF2 218 aa15.21■□□□□ 0.02
TM9SF1-201ENST00000261789 ASB18Q6ZVZ8 466 aa15.21■□□□□ 0.02
TM9SF1-201ENST00000261789 ASPGQ86U10 573 aa15.21■□□□□ 0.02
TM9SF1-201ENST00000261789 FANK1Q8TC84 345 aa15.21■□□□□ 0.02
TM9SF1-201ENST00000261789 TTTY10Q9BZA0 68 aa15.21■□□□□ 0.02
TM9SF1-201ENST00000261789 SIDT1Q9NXL6 827 aaKnown RBP15.21■□□□□ 0.02
TM9SF1-201ENST00000261789 EXTL2Q9UBQ6 330 aa15.21■□□□□ 0.02
TM9SF1-201ENST00000261789 UNC119BA6NIH7 251 aa15.2■□□□□ 0.02
TM9SF1-201ENST00000261789 SCO2O43819 266 aa15.2■□□□□ 0.02
TM9SF1-201ENST00000261789 CPNE3O75131 537 aaKnown RBP15.2■□□□□ 0.02
TM9SF1-201ENST00000261789 HLA-DQB1P01920 261 aa15.2■□□□□ 0.02
TM9SF1-201ENST00000261789 PRKAR1AP10644 381 aa15.2■□□□□ 0.02
TM9SF1-201ENST00000261789 RFX3P48380 749 aa15.2■□□□□ 0.02
TM9SF1-201ENST00000261789 INPP1P49441 399 aa15.2■□□□□ 0.02
TM9SF1-201ENST00000261789 AGFG1P52594 562 aaKnown RBP15.2■□□□□ 0.02
TM9SF1-201ENST00000261789 RPS7P62081 194 aaKnown RBP15.2■□□□□ 0.02
TM9SF1-201ENST00000261789 TNFRSF17Q02223 184 aa15.2■□□□□ 0.02
TM9SF1-201ENST00000261789 EFR3AQ14156 821 aa15.2■□□□□ 0.02
TM9SF1-201ENST00000261789 MRPL2Q5T653 305 aaKnown RBP15.2■□□□□ 0.02
TM9SF1-201ENST00000261789 NIPAL3Q6P499 406 aa15.2■□□□□ 0.02
TM9SF1-201ENST00000261789 FIGNL1Q6PIW4 674 aa15.2■□□□□ 0.02
TM9SF1-201ENST00000261789 ARL9Q6T311 187 aa15.2■□□□□ 0.02
TM9SF1-201ENST00000261789 RPTNQ6XPR3 784 aa15.2■□□□□ 0.02
TM9SF1-201ENST00000261789 ACBD7Q8N6N7 88 aa15.2■□□□□ 0.02
TM9SF1-201ENST00000261789 C7orf57Q8NEG2 295 aa15.2■□□□□ 0.02
TM9SF1-201ENST00000261789 OR4K14Q8NGD5 310 aa15.2■□□□□ 0.02
TM9SF1-201ENST00000261789 NR4A3Q92570 626 aa15.2■□□□□ 0.02
TM9SF1-201ENST00000261789 GAL3ST3Q96A11 431 aa15.2■□□□□ 0.02
TM9SF1-201ENST00000261789 LYARQ9NX58 379 aaKnown RBP15.2■□□□□ 0.02
TM9SF1-201ENST00000261789 ZNF624Q9P2J8 865 aaPredicted RBP15.2■□□□□ 0.02
TM9SF1-201ENST00000261789 MRPS2Q9Y399 296 aaKnown RBP15.2■□□□□ 0.02
TM9SF1-201ENST00000261789 PCDHGB7Q9Y5F8 929 aa15.2■□□□□ 0.02
TM9SF1-201ENST00000261789 LOC105369274A0A096LPK9 316 aa15.2■□□□□ 0.02
TM9SF1-201ENST00000261789 ADH1BP00325 375 aa15.2■□□□□ 0.02
TM9SF1-201ENST00000261789 PAHP00439 452 aa15.2■□□□□ 0.02
TM9SF1-201ENST00000261789 GYPBP06028 91 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms