RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 GCDHQ92947 438 aaPredicted RBP11.38□□□□□ -0.59
COL8A1-201ENST00000261037 FBRSQ9HAH7 460 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 BTNL2Q9UIR0 455 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 B3GNT3Q9Y2A9 372 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 H3BUI4 141 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 TPPPO94811 219 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 CDK2P24941 298 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 CAV2P51636 162 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 WNT4P56705 351 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 PTPRRQ15256 657 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 LYSMD4Q5XG99 296 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 PAPD5Q8NDF8 572 aaKnown RBP11.38□□□□□ -0.59
COL8A1-201ENST00000261037 GPR150Q8NGU9 434 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 RTP4Q96DX8 246 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 PGAP3Q96FM1 320 aaPredicted RBP11.38□□□□□ -0.59
COL8A1-201ENST00000261037 SORT1Q99523 831 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 OR51E2Q9H255 320 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 DDX31Q9H8H2 851 aaKnown RBP11.38□□□□□ -0.59
COL8A1-201ENST00000261037 ACOT13Q9NPJ3 140 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 FAM86C1Q9NVL1 165 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 IL17CQ9P0M4 197 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 ZNF443Q9Y2A4 671 aaPredicted RBP11.38□□□□□ -0.59
COL8A1-201ENST00000261037 MYH13Q9UKX3 1938 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 HMGN2P05204 90 aaKnown RBP11.38□□□□□ -0.59
COL8A1-201ENST00000261037 DCNP07585 359 aaKnown RBP11.38□□□□□ -0.59
COL8A1-201ENST00000261037 CCR7P32248 378 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 GJA5P36382 358 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 NFATC3Q12968 1075 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 GPR50Q13585 617 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 FGL2Q14314 439 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 COQ5Q5HYK3 327 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 KCTD20Q7Z5Y7 419 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 LRRC18Q8N456 261 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 MS4A15Q8N5U1 240 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 CNEP1R1Q8N9A8 125 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 KDM1BQ8NB78 822 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 B3GNT7Q8NFL0 401 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 DTD2Q96FN9 168 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 C7orf50Q9BRJ6 194 aaKnown RBP11.38□□□□□ -0.59
COL8A1-201ENST00000261037 COQ3Q9NZJ6 369 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 CAMK2AQ9UQM7 478 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 DBHP09172 617 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 UGT2B7P16662 529 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 RGS6P49758 472 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 SERTAD2Q14140 314 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 PLCXD3Q63HM9 321 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 CYS1Q717R9 158 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 PIWIL3Q7Z3Z3 882 aaKnown RBP11.38□□□□□ -0.59
COL8A1-201ENST00000261037 SLC2A12Q8TD20 617 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 ITFG2Q969R8 447 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 OR7D2Q96RA2 312 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 PHB2Q99623 299 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 CCDC32Q9BV29 185 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 OR2B2Q9GZK3 357 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 MAGED1Q9Y5V3 778 aaPredicted RBP11.38□□□□□ -0.59
COL8A1-201ENST00000261037 AP1M2Q9Y6Q5 423 aa11.38□□□□□ -0.59
COL8A1-201ENST00000261037 LOC102723532A0A0G2JNH3 316 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 NCR1O76036 304 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 C1SP09871 688 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 GPX3P22352 226 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 CRABP1P29762 137 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 ADARB1P78563 741 aaKnown RBP11.37□□□□□ -0.59
COL8A1-201ENST00000261037 TAP2Q03519 686 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 TMEM201Q5SNT2 666 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 OR1S1Q8NH92 325 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 C4orf36Q96KX1 117 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 ZNF681Q96N22 645 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 SLC46A2Q9BY10 475 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 RDH14Q9HBH5 336 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 HEBP1Q9NRV9 189 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 VAPAQ9P0L0 249 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 PRELID1Q9Y255 219 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 ANTXRLA6NF34 631 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 B4GAT1O43505 415 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 PRICKLE3O43900 615 aaPredicted RBP11.37□□□□□ -0.59
COL8A1-201ENST00000261037 DNAJB5O75953 348 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 ENTPD8Q5MY95 495 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 ELP2Q6IA86 826 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 NCCRP1Q6ZVX7 275 aaPredicted RBP11.37□□□□□ -0.59
COL8A1-201ENST00000261037 ARFGAP1Q8N6T3 406 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 C3orf30Q96M34 536 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 BIRC8Q96P09 236 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 ADOQ96SZ5 270 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 PDLIM7Q9NR12 457 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 SCML1Q9UN30 329 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 MED16Q9Y2X0 877 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 LYRM1O43325 122 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 SCGB2A1O75556 95 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 DCTP40126 519 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 GSCP56915 257 aaPredicted RBP11.37□□□□□ -0.59
COL8A1-201ENST00000261037 ACTBP60709 375 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 ACTG1P63261 375 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 SLC6A16Q9GZN6 736 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 HAO2Q9NYQ3 351 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 LRFN1Q9P244 771 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 EDARQ9UNE0 448 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 A0A0G2JMP0 313 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 PPP5CP53041 499 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 CXCR4P61073 352 aa11.37□□□□□ -0.59
COL8A1-201ENST00000261037 AKR1C8PQ5T2L2 129 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms