RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 ADAM18Q9Y3Q7 739 aa17.57■□□□□ 0.4
SMARCC1-201ENST00000254480 RNASET2O00584 256 aaKnown RBP17.57■□□□□ 0.4
SMARCC1-201ENST00000254480 CHRM4P08173 479 aa17.57■□□□□ 0.4
SMARCC1-201ENST00000254480 RPS17P08708 135 aaKnown RBP17.57■□□□□ 0.4
SMARCC1-201ENST00000254480 GJA4P35212 333 aa17.57■□□□□ 0.4
SMARCC1-201ENST00000254480 ZNF33BQ06732 778 aa17.57■□□□□ 0.4
SMARCC1-201ENST00000254480 MRPL21Q7Z2W9 205 aaKnown RBP17.57■□□□□ 0.4
SMARCC1-201ENST00000254480 OR7D2Q96RA2 312 aa17.57■□□□□ 0.4
SMARCC1-201ENST00000254480 ZNF300Q96RE9 604 aaPredicted RBP17.57■□□□□ 0.4
SMARCC1-201ENST00000254480 MED16Q9Y2X0 877 aa17.57■□□□□ 0.4
SMARCC1-201ENST00000254480 NUDT7P0C024 238 aa17.57■□□□□ 0.4
SMARCC1-201ENST00000254480 HOXB9P17482 250 aaPredicted RBP17.57■□□□□ 0.4
SMARCC1-201ENST00000254480 BMFQ96LC9 184 aa17.57■□□□□ 0.4
SMARCC1-201ENST00000254480 THSD1Q9NS62 852 aa17.57■□□□□ 0.4
SMARCC1-201ENST00000254480 F13BP05160 661 aa17.56■□□□□ 0.4
SMARCC1-201ENST00000254480 IL7P13232 177 aa17.56■□□□□ 0.4
SMARCC1-201ENST00000254480 GSCP56915 257 aaPredicted RBP17.56■□□□□ 0.4
SMARCC1-201ENST00000254480 KLHL15Q96M94 604 aa17.56■□□□□ 0.4
SMARCC1-201ENST00000254480 SCML1Q9UN30 329 aa17.56■□□□□ 0.4
SMARCC1-201ENST00000254480 NUMBLQ9Y6R0 609 aa17.56■□□□□ 0.4
SMARCC1-201ENST00000254480 ZBTB42B2RXF5 422 aa17.56■□□□□ 0.4
SMARCC1-201ENST00000254480 Q6ZPB1 254 aaPredicted RBP17.56■□□□□ 0.4
SMARCC1-201ENST00000254480 CBARPQ8N350 705 aaPredicted RBP17.56■□□□□ 0.4
SMARCC1-201ENST00000254480 RGCCQ9H4X1 137 aa17.56■□□□□ 0.4
SMARCC1-201ENST00000254480 HBQ1P09105 142 aa17.56■□□□□ 0.4
SMARCC1-201ENST00000254480 RAC2P15153 192 aa17.56■□□□□ 0.4
SMARCC1-201ENST00000254480 PCGF2P35227 344 aa17.56■□□□□ 0.4
SMARCC1-201ENST00000254480 NFATC3Q12968 1075 aa17.56■□□□□ 0.4
SMARCC1-201ENST00000254480 ENTPD8Q5MY95 495 aa17.56■□□□□ 0.4
SMARCC1-201ENST00000254480 PAQR9Q6ZVX9 377 aa17.56■□□□□ 0.4
SMARCC1-201ENST00000254480 PRSS48Q7RTY5 328 aa17.56■□□□□ 0.4
SMARCC1-201ENST00000254480 PAPOLGQ9BWT3 736 aaKnown RBP17.56■□□□□ 0.4
SMARCC1-201ENST00000254480 PINK1Q9BXM7 581 aa17.56■□□□□ 0.4
SMARCC1-201ENST00000254480 LHX3Q9UBR4 397 aa17.56■□□□□ 0.4
SMARCC1-201ENST00000254480 CCDC163A0A0D9SF12 145 aa17.56■□□□□ 0.4
SMARCC1-201ENST00000254480 ACTL6BO94805 426 aa17.56■□□□□ 0.4
SMARCC1-201ENST00000254480 CD6P30203 668 aa17.56■□□□□ 0.4
SMARCC1-201ENST00000254480 CTHP32929 405 aa17.56■□□□□ 0.4
SMARCC1-201ENST00000254480 LEXMQ3ZCV2 418 aa17.56■□□□□ 0.4
SMARCC1-201ENST00000254480 PLEKHN1Q494U1 663 aaPredicted RBP17.56■□□□□ 0.4
SMARCC1-201ENST00000254480 TMEM64Q6YI46 380 aa17.56■□□□□ 0.4
SMARCC1-201ENST00000254480 MEX3BQ6ZN04 569 aaKnown RBP17.56■□□□□ 0.4
SMARCC1-201ENST00000254480 KANSL1Q7Z3B3 1105 aa17.56■□□□□ 0.4
SMARCC1-201ENST00000254480 ARRDC2Q8TBH0 407 aa17.56■□□□□ 0.4
SMARCC1-201ENST00000254480 BPIFA2Q96DR5 249 aa17.56■□□□□ 0.4
SMARCC1-201ENST00000254480 COQ3Q9NZJ6 369 aa17.56■□□□□ 0.4
SMARCC1-201ENST00000254480 B3GNT3Q9Y2A9 372 aa17.56■□□□□ 0.4
SMARCC1-201ENST00000254480 APLNRP35414 380 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 EFR3AQ14156 821 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 MBTPS1Q14703 1052 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 PRAMEF20Q5VT98 475 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 B3GLCTQ6Y288 498 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 ARL14Q8N4G2 192 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 CLEC1AQ8NC01 280 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 SPTSSAQ969W0 71 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 ARRDC3Q96B67 414 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 RRNAD1Q96FB5 475 aaKnown RBP17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 DCBLD2Q96PD2 775 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 SAP130Q9H0E3 1048 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 TMEM181Q9P2C4 612 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 POU3F2P20265 443 aaPredicted RBP17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 GSG1LQ6UXU4 331 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 ADAMTS19Q8TE59 1207 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 ZNF696Q9H7X3 374 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 VIRMAQ69YN4 1812 aaKnown RBP17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 DENRO43583 198 aaKnown RBP17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 APOC3P02656 99 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 SERPINA5P05154 406 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 FGF4P08620 206 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 NPR2P20594 1047 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 CD38P28907 300 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 HORMAD2Q8N7B1 307 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 ADAMTS16Q8TE57 1224 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 IL1F10Q8WWZ1 152 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 CDC6Q99741 560 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 GMPR2Q9P2T1 348 aaKnown RBP17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 DOT1LQ8TEK3 1739 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 ANKRD28O15084 1053 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 MPPED1O15442 326 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 SLC16A7O60669 478 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 WNT4P56705 351 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 RAB15P59190 212 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 PRPS1P60891 318 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 KIR2DS3Q14952 304 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 OR4D6Q8NGJ1 314 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 C4orf36Q96KX1 117 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 ACTR6Q9GZN1 396 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 FAIMQ9NVQ4 179 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 PLEKHJ1Q9NW61 149 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 T-ENOLP0DO92 83 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 VHLLQ6RSH7 139 aa17.55■□□□□ 0.4
SMARCC1-201ENST00000254480 H7C1C5 153 aa17.54■□□□□ 0.4
SMARCC1-201ENST00000254480 LCN6P62502 163 aa17.54■□□□□ 0.4
SMARCC1-201ENST00000254480 GK3PQ14409 553 aa17.54■□□□□ 0.4
SMARCC1-201ENST00000254480 PODNL1Q6PEZ8 512 aa17.54■□□□□ 0.4
SMARCC1-201ENST00000254480 TSNAXQ99598 290 aaKnown RBP17.54■□□□□ 0.4
SMARCC1-201ENST00000254480 MYNNQ9NPC7 610 aa17.54■□□□□ 0.4
SMARCC1-201ENST00000254480 DCAF13Q9NV06 445 aaKnown RBP17.54■□□□□ 0.4
SMARCC1-201ENST00000254480 CAMK2AQ9UQM7 478 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms