RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 A0A1W2PR48 441 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 RNF13O43567 381 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 EFCAB14O75071 495 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 FZD7O75084 574 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 ALDOBP05062 364 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 RHOP08100 348 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 CLDN20P56880 219 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 BTN1A1Q13410 526 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 ESCO2Q56NI9 601 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 ZNF322Q6U7Q0 402 aaPredicted RBP11.17□□□□□ -0.62
USHBP1-201ENST00000252597 SHISA5Q8N114 240 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 OR11H7Q8NGC8 314 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 SUN3Q8TAQ9 357 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 FANK1Q8TC84 345 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 NARS2Q96I59 477 aaKnown RBP11.17□□□□□ -0.62
USHBP1-201ENST00000252597 PDCD1LG2Q9BQ51 273 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 CFHR5Q9BXR6 569 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 OR52D1Q9H346 318 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 MRPS30Q9NP92 439 aaKnown RBP11.17□□□□□ -0.62
USHBP1-201ENST00000252597 ZNF69Q9UC07 566 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 TESQ9UGI8 421 aaKnown RBP11.17□□□□□ -0.62
USHBP1-201ENST00000252597 KLHL21Q9UJP4 597 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 GBF1Q92538 1859 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 LRRN3E7EW58 273 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 SIGLEC5O15389 551 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 CHP2O43745 196 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 FMO6PO60774 539 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 RGS9O75916 674 aaPredicted RBP11.17□□□□□ -0.62
USHBP1-201ENST00000252597 PPP1R3DO95685 299 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 ASGR2P07307 311 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 UCHL1P09936 223 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 HLA-DMAP28067 261 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 CENPAP49450 140 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 SIGLEC14Q08ET2 396 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 SNTA1Q13424 505 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 ANGPT1Q15389 498 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 PGGHGQ32M88 737 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 ACSM3Q53FZ2 586 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 POMZP3Q6PJE2 187 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 GALNT11Q8NCW6 608 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 SNX33Q8WV41 574 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 SUSD6Q92537 303 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 OSTF1Q92882 214 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 MED30Q96HR3 178 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 GINS4Q9BRT9 223 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 SEMA4CQ9C0C4 833 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 LRRN3Q9H3W5 708 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 TRIM36Q9NQ86 728 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 C12orf4Q9NQ89 552 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 BABAM2Q9NXR7 383 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 HCN3Q9P1Z3 774 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 DPP7Q9UHL4 492 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 GNG8Q9UK08 70 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 DSPPQ9NZW4 1301 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 TRDV1A0A1B0GX56 115 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 LEUTXA8MZ59 168 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 RAD1O60671 282 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 SLC22A5O76082 557 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 AIFM1O95831 613 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 LGI1O95970 557 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 TCRBP04435 133 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 CSF2RAP15509 400 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 NT5EP21589 574 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 MPIP34949 423 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 PXNP49023 591 aaPredicted RBP11.17□□□□□ -0.62
USHBP1-201ENST00000252597 ANXA11P50995 505 aaKnown RBP11.17□□□□□ -0.62
USHBP1-201ENST00000252597 SFXN4Q6P4A7 337 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 TMEM91Q6ZNR0 172 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 ZNF767PQ75MW2 155 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 CPXM2Q8N436 756 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 RAB42Q8N4Z0 105 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 MEIOBQ8N635 442 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 HCAR2Q8TDS4 363 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 OR8D1Q8WZ84 308 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 SEC22CQ9BRL7 303 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 NDC1Q9BTX1 674 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 TMEM138Q9NPI0 162 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 RCE1Q9Y256 329 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 PCDHGB7Q9Y5F8 929 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 CDH10Q9Y6N8 788 aa11.17□□□□□ -0.62
USHBP1-201ENST00000252597 PLXND1Q9Y4D7 1925 aa11.16□□□□□ -0.62
USHBP1-201ENST00000252597 ACOD1A6NK06 481 aa11.16□□□□□ -0.62
USHBP1-201ENST00000252597 PRRT4C9JH25 899 aa11.16□□□□□ -0.62
USHBP1-201ENST00000252597 LDB3O75112 727 aa11.16□□□□□ -0.62
USHBP1-201ENST00000252597 KDM4BO94953 1096 aa11.16□□□□□ -0.62
USHBP1-201ENST00000252597 SIX6O95475 246 aa11.16□□□□□ -0.62
USHBP1-201ENST00000252597 EPPINO95925 133 aa11.16□□□□□ -0.62
USHBP1-201ENST00000252597 ADH1AP07327 375 aa11.16□□□□□ -0.62
USHBP1-201ENST00000252597 H2AFB2P0C5Z0 115 aa11.16□□□□□ -0.62
USHBP1-201ENST00000252597 CCR4P51679 360 aa11.16□□□□□ -0.62
USHBP1-201ENST00000252597 NDUFA9Q16795 377 aa11.16□□□□□ -0.62
USHBP1-201ENST00000252597 MPP7Q5T2T1 576 aa11.16□□□□□ -0.62
USHBP1-201ENST00000252597 C1orf94Q6P1W5 598 aa11.16□□□□□ -0.62
USHBP1-201ENST00000252597 RASSF6Q6ZTQ3 369 aa11.16□□□□□ -0.62
USHBP1-201ENST00000252597 CDK20Q8IZL9 346 aa11.16□□□□□ -0.62
USHBP1-201ENST00000252597 MORN4Q8NDC4 146 aa11.16□□□□□ -0.62
USHBP1-201ENST00000252597 SDR9C7Q8NEX9 313 aa11.16□□□□□ -0.62
USHBP1-201ENST00000252597 GHSRQ92847 366 aa11.16□□□□□ -0.62
USHBP1-201ENST00000252597 CD180Q99467 661 aa11.16□□□□□ -0.62
USHBP1-201ENST00000252597 DDOQ99489 341 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms