RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 E7EQ34 232 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 ANHXE9PGG2 379 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 J3QRE1 110 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 NDUFS4O43181 175 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 PPM1BO75688 479 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 SOX14O95416 240 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 UGT2B7P16662 529 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 CEBPBP17676 345 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 NPR2P20594 1047 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 BMPR1AP36894 532 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 CASRP41180 1078 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 CRYBB2P43320 205 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 METAP1P53582 386 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 TBPL1P62380 186 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 SNRPNP63162 240 aaKnown RBP3.88□□□□□ -1.79
UBE4A-201ENST00000252108 HBA1P69905 142 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 IFITM2Q01629 132 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 BAK1Q16611 211 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 PGGHGQ32M88 737 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 GLYR1Q49A26 553 aaPredicted RBP3.88□□□□□ -1.79
UBE4A-201ENST00000252108 RAET1GQ6H3X3 334 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 C3P1Q6ZMU1 363 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 RTL4Q6ZR62 310 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 P4HA3Q7Z4N8 544 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 OR10H4Q8NGA5 316 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 MOSPD2Q8NHP6 518 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 SNX33Q8WV41 574 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 TMEM203Q969S6 136 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 RAB7BQ96AH8 199 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 NACC2Q96BF6 587 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 MSANTD3Q96H12 275 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 ABCG8Q9H221 673 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 MAN2C1Q9NTJ4 1040 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 TAS2R10Q9NYW0 307 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 GPR34Q9UPC5 381 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 ZFR2Q9UPR6 939 aaKnown RBP3.88□□□□□ -1.79
UBE4A-201ENST00000252108 MRPS7Q9Y2R9 242 aaKnown RBP3.88□□□□□ -1.79
UBE4A-201ENST00000252108 MED31Q9Y3C7 131 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 V9GYH0 126 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 KANTRA0A1W2PQU2 76 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 PHYHO14832 338 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 CLEC3AO75596 197 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 GIPP09681 153 aaPredicted RBP3.88□□□□□ -1.79
UBE4A-201ENST00000252108 BMP8BP34820 402 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 NCBP2P52298 156 aaKnown RBP eCLIP3.88□□□□□ -1.79
UBE4A-201ENST00000252108 PRPF38BQ5VTL8 546 aaKnown RBP3.88□□□□□ -1.79
UBE4A-201ENST00000252108 C1orf94Q6P1W5 598 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 BMP8AQ7Z5Y6 402 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 CFAP206Q8IYR0 622 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 RNF175Q8N4F7 328 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 LILRA3Q8N6C8 439 aaPredicted RBP3.88□□□□□ -1.79
UBE4A-201ENST00000252108 ARL14EPQ8N8R7 260 aaPredicted RBP3.88□□□□□ -1.79
UBE4A-201ENST00000252108 POMGNT2Q8NAT1 580 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 ZNF296Q8WUU4 475 aaPredicted RBP3.88□□□□□ -1.79
UBE4A-201ENST00000252108 UBL7Q96S82 380 aaPredicted RBP3.88□□□□□ -1.79
UBE4A-201ENST00000252108 SOSTQ9BQB4 213 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 C1QTNF2Q9BXJ5 285 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 COMMD4Q9H0A8 199 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 LMAN2LQ9H0V9 348 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 KDM4EB2RXH2 506 aaPredicted RBP3.88□□□□□ -1.79
UBE4A-201ENST00000252108 H7C2Y5 167 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 ACOT7O00154 380 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 TSPAN4O14817 238 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 EEF1E1O43324 174 aaKnown RBP3.88□□□□□ -1.79
UBE4A-201ENST00000252108 UBBP0CG47 229 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 UBCP0CG48 685 aaKnown RBP3.88□□□□□ -1.79
UBE4A-201ENST00000252108 MAP3K8P41279 467 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 CTSCP53634 463 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 CCL23P55773 120 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 MAZP56270 477 aaKnown RBP3.88□□□□□ -1.79
UBE4A-201ENST00000252108 TAS2R38P59533 333 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 RPS27AP62979 156 aaKnown RBP3.88□□□□□ -1.79
UBE4A-201ENST00000252108 UBA52P62987 128 aaKnown RBP3.88□□□□□ -1.79
UBE4A-201ENST00000252108 TMEM115Q12893 351 aaPredicted RBP3.88□□□□□ -1.79
UBE4A-201ENST00000252108 ASB18Q6ZVZ8 466 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 LINGO2Q7L985 606 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 PDZD3Q86UT5 571 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 ADGRG3Q86Y34 549 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 TMEM145Q8NBT3 493 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 ZNF248Q8NDW4 579 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 OR52P1PQ8NH57 321 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 SMAP2Q8WU79 429 aaPredicted RBP3.88□□□□□ -1.79
UBE4A-201ENST00000252108 TNFAIP8L1Q8WVP5 186 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 GATAD2BQ8WXI9 593 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 UCN3Q969E3 161 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 SLC22A18Q96BI1 424 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 HAVCR1Q96D42 359 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 MNTQ99583 582 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 RIOK2Q9BVS4 552 aaKnown RBP3.88□□□□□ -1.79
UBE4A-201ENST00000252108 MTHFD2LQ9H903 347 aaPredicted RBP3.88□□□□□ -1.79
UBE4A-201ENST00000252108 LIN7BQ9HAP6 207 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 TCF7L1Q9HCS4 588 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 IL36AQ9UHA7 158 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 ACSL6Q9UKU0 697 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 MRPS23Q9Y3D9 190 aaKnown RBP3.88□□□□□ -1.79
UBE4A-201ENST00000252108 ETV7Q9Y603 341 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 CFAP20Q9Y6A4 193 aaKnown RBP3.88□□□□□ -1.79
UBE4A-201ENST00000252108 TBC1D3DA0A087WVF3 549 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 TBC1D3IA0A087WXS9 549 aa3.88□□□□□ -1.79
UBE4A-201ENST00000252108 TBC1D3EA0A087X179 549 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms