RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 SLC38A2Q96QD8 506 aa17.66■□□□□ 0.42
SNX4-201ENST00000251775 RBP7Q96R05 134 aa17.66■□□□□ 0.42
SNX4-201ENST00000251775 ABHD1Q96SE0 405 aa17.66■□□□□ 0.42
SNX4-201ENST00000251775 PLA2G2FQ9BZM2 168 aa17.66■□□□□ 0.42
SNX4-201ENST00000251775 RSPH9Q9H1X1 276 aaPredicted RBP17.66■□□□□ 0.42
SNX4-201ENST00000251775 DPAGT1Q9H3H5 408 aa17.66■□□□□ 0.42
SNX4-201ENST00000251775 ZNF624Q9P2J8 865 aaPredicted RBP17.66■□□□□ 0.42
SNX4-201ENST00000251775 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.66■□□□□ 0.42
SNX4-201ENST00000251775 MDC1Q14676 2089 aaKnown RBP17.66■□□□□ 0.42
SNX4-201ENST00000251775 LOC105369274A0A096LPK9 316 aa17.65■□□□□ 0.42
SNX4-201ENST00000251775 BET1O15155 118 aa17.65■□□□□ 0.42
SNX4-201ENST00000251775 CA3P07451 260 aa17.65■□□□□ 0.42
SNX4-201ENST00000251775 PITPNBP48739 271 aa17.65■□□□□ 0.42
SNX4-201ENST00000251775 HSF2Q03933 536 aa17.65■□□□□ 0.42
SNX4-201ENST00000251775 GALEQ14376 348 aa17.65■□□□□ 0.42
SNX4-201ENST00000251775 MLC1Q15049 377 aa17.65■□□□□ 0.42
SNX4-201ENST00000251775 HBMQ6B0K9 141 aa17.65■□□□□ 0.42
SNX4-201ENST00000251775 C16orf62Q7Z3J2 963 aa17.65■□□□□ 0.42
SNX4-201ENST00000251775 OAFQ86UD1 273 aa17.65■□□□□ 0.42
SNX4-201ENST00000251775 OR4N4Q8N0Y3 316 aa17.65■□□□□ 0.42
SNX4-201ENST00000251775 SLC35G5Q96KT7 338 aa17.65■□□□□ 0.42
SNX4-201ENST00000251775 PRRC1Q96M27 445 aa17.65■□□□□ 0.42
SNX4-201ENST00000251775 CERS4Q9HA82 394 aa17.65■□□□□ 0.42
SNX4-201ENST00000251775 KCNK12Q9HB15 430 aa17.65■□□□□ 0.42
SNX4-201ENST00000251775 UBQLN2Q9UHD9 624 aa17.65■□□□□ 0.42
SNX4-201ENST00000251775 A0A087WUU8 490 aa17.65■□□□□ 0.42
SNX4-201ENST00000251775 CFDP00746 253 aaPredicted RBP17.65■□□□□ 0.42
SNX4-201ENST00000251775 TCRBP04435 133 aa17.65■□□□□ 0.42
SNX4-201ENST00000251775 ATF4P18848 351 aaPredicted RBP17.65■□□□□ 0.42
SNX4-201ENST00000251775 RBMS1P29558 406 aaKnown RBP17.65■□□□□ 0.42
SNX4-201ENST00000251775 THBS2P35442 1172 aa17.65■□□□□ 0.42
SNX4-201ENST00000251775 BCL6P41182 706 aa17.65■□□□□ 0.42
SNX4-201ENST00000251775 MTNR1BP49286 362 aa17.65■□□□□ 0.42
SNX4-201ENST00000251775 RAB28P51157 221 aa17.65■□□□□ 0.42
SNX4-201ENST00000251775 SLC36A2Q495M3 483 aa17.65■□□□□ 0.42
SNX4-201ENST00000251775 AADACL4Q5VUY2 407 aa17.65■□□□□ 0.42
SNX4-201ENST00000251775 FAM109BQ6ICB4 259 aaPredicted RBP17.65■□□□□ 0.42
SNX4-201ENST00000251775 SAMD12Q8N8I0 201 aa17.65■□□□□ 0.42
SNX4-201ENST00000251775 OR52N1Q8NH53 320 aa17.65■□□□□ 0.42
SNX4-201ENST00000251775 LHFPL5Q8TAF8 219 aa17.65■□□□□ 0.42
SNX4-201ENST00000251775 CEP76Q8TAP6 659 aa17.65■□□□□ 0.42
SNX4-201ENST00000251775 BTBD1Q9H0C5 482 aa17.65■□□□□ 0.42
SNX4-201ENST00000251775 CLEC4MQ9H2X3 399 aaPredicted RBP17.65■□□□□ 0.42
SNX4-201ENST00000251775 SLC35C2Q9NQQ7 365 aa17.65■□□□□ 0.42
SNX4-201ENST00000251775 OBP2AQ9NY56 170 aa17.65■□□□□ 0.42
SNX4-201ENST00000251775 TRPC4Q9UBN4 977 aa17.65■□□□□ 0.42
SNX4-201ENST00000251775 LIPT1Q9Y234 373 aa17.65■□□□□ 0.42
SNX4-201ENST00000251775 NUBP2Q9Y5Y2 271 aa17.65■□□□□ 0.42
SNX4-201ENST00000251775 DOCK8Q8NF50 2099 aa17.65■□□□□ 0.42
SNX4-201ENST00000251775 CH25HO95992 272 aa17.64■□□□□ 0.41
SNX4-201ENST00000251775 IGHA1P01876 353 aa17.64■□□□□ 0.41
SNX4-201ENST00000251775 TRA2BP62995 288 aaKnown RBP17.64■□□□□ 0.41
SNX4-201ENST00000251775 AGERQ15109 404 aa17.64■□□□□ 0.41
SNX4-201ENST00000251775 PLEKHM3Q6ZWE6 761 aa17.64■□□□□ 0.41
SNX4-201ENST00000251775 GPAT4Q86UL3 456 aa17.64■□□□□ 0.41
SNX4-201ENST00000251775 RAB42Q8N4Z0 105 aa17.64■□□□□ 0.41
SNX4-201ENST00000251775 TRPV4Q9HBA0 871 aa17.64■□□□□ 0.41
SNX4-201ENST00000251775 ZCCHC3Q9NUD5 404 aaKnown RBP17.64■□□□□ 0.41
SNX4-201ENST00000251775 P2RX2Q9UBL9 471 aa17.64■□□□□ 0.41
SNX4-201ENST00000251775 EXOGQ9Y2C4 368 aaKnown RBP17.64■□□□□ 0.41
SNX4-201ENST00000251775 SLC9A8Q9Y2E8 581 aa17.64■□□□□ 0.41
SNX4-201ENST00000251775 OR52A4PA6NMU1 304 aa17.64■□□□□ 0.41
SNX4-201ENST00000251775 TSPAN9O75954 239 aa17.64■□□□□ 0.41
SNX4-201ENST00000251775 DRD2P14416 443 aa17.64■□□□□ 0.41
SNX4-201ENST00000251775 GALP22466 123 aa17.64■□□□□ 0.41
SNX4-201ENST00000251775 ZNF322Q6U7Q0 402 aaPredicted RBP17.64■□□□□ 0.41
SNX4-201ENST00000251775 PRSS42Q7Z5A4 293 aa17.64■□□□□ 0.41
SNX4-201ENST00000251775 SFXN1Q9H9B4 322 aa17.64■□□□□ 0.41
SNX4-201ENST00000251775 CNIH4Q9P003 139 aa17.64■□□□□ 0.41
SNX4-201ENST00000251775 PTGFRNQ9P2B2 879 aa17.64■□□□□ 0.41
SNX4-201ENST00000251775 RGS9O75916 674 aaPredicted RBP17.63■□□□□ 0.41
SNX4-201ENST00000251775 NTN1O95631 604 aa17.63■□□□□ 0.41
SNX4-201ENST00000251775 NR2F1P10589 423 aa17.63■□□□□ 0.41
SNX4-201ENST00000251775 ALPPL2P10696 532 aa17.63■□□□□ 0.41
SNX4-201ENST00000251775 NCBP2P52298 156 aaKnown RBP eCLIP17.63■□□□□ 0.41
SNX4-201ENST00000251775 MLLT1Q03111 559 aaPredicted RBP17.63■□□□□ 0.41
SNX4-201ENST00000251775 PUDPQ08623 228 aa17.63■□□□□ 0.41
SNX4-201ENST00000251775 ZIC1Q15915 447 aa17.63■□□□□ 0.41
SNX4-201ENST00000251775 ZNF750Q32MQ0 723 aa17.63■□□□□ 0.41
SNX4-201ENST00000251775 SMARCD3Q6STE5 483 aa17.63■□□□□ 0.41
SNX4-201ENST00000251775 LYPD4Q6UWN0 246 aa17.63■□□□□ 0.41
SNX4-201ENST00000251775 RTL4Q6ZR62 310 aa17.63■□□□□ 0.41
SNX4-201ENST00000251775 ADGRG3Q86Y34 549 aa17.63■□□□□ 0.41
SNX4-201ENST00000251775 BBS1Q8NFJ9 593 aa17.63■□□□□ 0.41
SNX4-201ENST00000251775 OR8K5Q8NH50 307 aa17.63■□□□□ 0.41
SNX4-201ENST00000251775 RFKQ969G6 155 aa17.63■□□□□ 0.41
SNX4-201ENST00000251775 AIFM2Q9BRQ8 373 aa17.63■□□□□ 0.41
SNX4-201ENST00000251775 CDCP1Q9H5V8 836 aa17.63■□□□□ 0.41
SNX4-201ENST00000251775 ISG20L2Q9H9L3 353 aaKnown RBP17.63■□□□□ 0.41
SNX4-201ENST00000251775 SLC6A20Q9NP91 592 aa17.63■□□□□ 0.41
SNX4-201ENST00000251775 PHPT1Q9NRX4 125 aaPredicted RBP17.63■□□□□ 0.41
SNX4-201ENST00000251775 GDE1Q9NZC3 331 aa17.63■□□□□ 0.41
SNX4-201ENST00000251775 KCMF1Q9P0J7 381 aa17.63■□□□□ 0.41
SNX4-201ENST00000251775 MEIKINA0A087WXM9 373 aa17.63■□□□□ 0.41
SNX4-201ENST00000251775 GPR89AB7ZAQ6 455 aa17.63■□□□□ 0.41
SNX4-201ENST00000251775 MAN2B1O00754 1011 aa17.63■□□□□ 0.41
SNX4-201ENST00000251775 GPR171O14626 319 aa17.63■□□□□ 0.41
SNX4-201ENST00000251775 SCAMP1O15126 338 aa17.63■□□□□ 0.41
SNX4-201ENST00000251775 PGRMC2O15173 223 aa17.63■□□□□ 0.41
SNX4-201ENST00000251775 RNF13O43567 381 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms