RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 HTR2AP28223 471 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 CRYBB2P43320 205 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 MTNR1AP48039 350 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 CDH11P55287 796 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 SLC36A4Q6YBV0 504 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 SPATC1Q76KD6 591 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 LYSMD2Q8IV50 215 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 OR4N2Q8NGD1 307 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 TBX5Q99593 518 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 ENKD1Q9H0I2 346 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 UCKL1Q9NWZ5 548 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 MAT2BQ9NZL9 334 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 SPACA6W5XKT8 324 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 CYR61O00622 381 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 IDH3BO43837 385 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 UPK1BO75841 260 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 GPR75O95800 540 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 ZNF136P52737 540 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 UBE2IP63279 158 aaKnown RBP14.65□□□□□ -0.06
LRFN1-201ENST00000248668 ARHGAP11BQ3KRB8 267 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 CEP78Q5JTW2 689 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 PRAMEF8Q5VWM4 474 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 PRAMEF7Q5VXH5 474 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 OOSP2Q86WS3 158 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 CA13Q8N1Q1 262 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 PROKR2Q8NFJ6 384 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 C1GALT1C1Q96EU7 318 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 C8orf33Q9H7E9 229 aaPredicted RBP14.65□□□□□ -0.06
LRFN1-201ENST00000248668 POT1Q9NUX5 634 aa14.65□□□□□ -0.06
LRFN1-201ENST00000248668 C19orf53Q9UNZ5 99 aaPredicted RBP14.65□□□□□ -0.06
LRFN1-201ENST00000248668 SLC9B1P1A6NJY1 282 aa14.64□□□□□ -0.07
LRFN1-201ENST00000248668 SOCS6O14544 535 aa14.64□□□□□ -0.07
LRFN1-201ENST00000248668 GALR3O60755 368 aaPredicted RBP14.64□□□□□ -0.07
LRFN1-201ENST00000248668 CDRT1O95170 752 aa14.64□□□□□ -0.07
LRFN1-201ENST00000248668 PRKCAP17252 672 aa14.64□□□□□ -0.07
LRFN1-201ENST00000248668 GCGRP47871 477 aa14.64□□□□□ -0.07
LRFN1-201ENST00000248668 LIMK1P53667 647 aa14.64□□□□□ -0.07
LRFN1-201ENST00000248668 CAV3P56539 151 aa14.64□□□□□ -0.07
LRFN1-201ENST00000248668 RPS25P62851 125 aaKnown RBP14.64□□□□□ -0.07
LRFN1-201ENST00000248668 ZNF791Q3KP31 576 aaPredicted RBP14.64□□□□□ -0.07
LRFN1-201ENST00000248668 SNAP47Q5SQN1 464 aa14.64□□□□□ -0.07
LRFN1-201ENST00000248668 ABI3BPQ7Z7G0 1075 aa14.64□□□□□ -0.07
LRFN1-201ENST00000248668 PARGQ86W56 976 aa14.64□□□□□ -0.07
LRFN1-201ENST00000248668 LINC00471Q8N535 108 aa14.64□□□□□ -0.07
LRFN1-201ENST00000248668 OR52R1Q8NGF1 315 aa14.64□□□□□ -0.07
LRFN1-201ENST00000248668 ZDHHC1Q8WTX9 485 aa14.64□□□□□ -0.07
LRFN1-201ENST00000248668 SPTY2D1-AS1A0A0U1RR47 76 aa14.64□□□□□ -0.07
LRFN1-201ENST00000248668 PRODHO43272 600 aa14.64□□□□□ -0.07
LRFN1-201ENST00000248668 RASSF6Q6ZTQ3 369 aa14.64□□□□□ -0.07
LRFN1-201ENST00000248668 PEX11GQ96HA9 241 aa14.64□□□□□ -0.07
LRFN1-201ENST00000248668 PIGUQ9H490 435 aa14.64□□□□□ -0.07
LRFN1-201ENST00000248668 CCDC59Q9P031 241 aaKnown RBP14.64□□□□□ -0.07
LRFN1-201ENST00000248668 PTGFRNQ9P2B2 879 aa14.64□□□□□ -0.07
LRFN1-201ENST00000248668 TESQ9UGI8 421 aaKnown RBP14.64□□□□□ -0.07
LRFN1-201ENST00000248668 DIMT1Q9UNQ2 313 aaKnown RBP14.64□□□□□ -0.07
LRFN1-201ENST00000248668 CFL2Q9Y281 166 aa14.64□□□□□ -0.07
LRFN1-201ENST00000248668 STX11O75558 287 aa14.64□□□□□ -0.07
LRFN1-201ENST00000248668 KCNK2O95069 426 aa14.64□□□□□ -0.07
LRFN1-201ENST00000248668 MED26O95402 600 aa14.64□□□□□ -0.07
LRFN1-201ENST00000248668 INSL4Q14641 139 aa14.64□□□□□ -0.07
LRFN1-201ENST00000248668 SPANXN2Q5MJ10 180 aa14.64□□□□□ -0.07
LRFN1-201ENST00000248668 KIAA0895LQ68EN5 471 aa14.64□□□□□ -0.07
LRFN1-201ENST00000248668 C19orf48Q6RUI8 117 aa14.64□□□□□ -0.07
LRFN1-201ENST00000248668 PMEPA1Q969W9 287 aa14.64□□□□□ -0.07
LRFN1-201ENST00000248668 DMRTB1Q96MA1 342 aa14.64□□□□□ -0.07
LRFN1-201ENST00000248668 PTCHD1Q96NR3 888 aa14.64□□□□□ -0.07
LRFN1-201ENST00000248668 NELL2Q99435 816 aa14.64□□□□□ -0.07
LRFN1-201ENST00000248668 IRF2BPLQ9H1B7 796 aa14.64□□□□□ -0.07
LRFN1-201ENST00000248668 SSR3Q9UNL2 185 aa14.64□□□□□ -0.07
LRFN1-201ENST00000248668 MEN1O00255 615 aa14.63□□□□□ -0.07
LRFN1-201ENST00000248668 SSTR4P31391 388 aa14.63□□□□□ -0.07
LRFN1-201ENST00000248668 SLC16A1P53985 500 aa14.63□□□□□ -0.07
LRFN1-201ENST00000248668 EEF1A1P68104 462 aaKnown RBP14.63□□□□□ -0.07
LRFN1-201ENST00000248668 CSTF1Q05048 431 aaKnown RBP14.63□□□□□ -0.07
LRFN1-201ENST00000248668 OR1Q1Q15612 314 aa14.63□□□□□ -0.07
LRFN1-201ENST00000248668 FHL5Q5TD97 284 aa14.63□□□□□ -0.07
LRFN1-201ENST00000248668 CPOQ8IVL8 374 aa14.63□□□□□ -0.07
LRFN1-201ENST00000248668 SAMD14Q8IZD0 417 aaPredicted RBP14.63□□□□□ -0.07
LRFN1-201ENST00000248668 ZNF619Q8N2I2 560 aa14.63□□□□□ -0.07
LRFN1-201ENST00000248668 HS3ST3A1Q9Y663 406 aa14.63□□□□□ -0.07
LRFN1-201ENST00000248668 OR5K3A6NET4 321 aa14.63□□□□□ -0.07
LRFN1-201ENST00000248668 CHST10O43529 356 aa14.63□□□□□ -0.07
LRFN1-201ENST00000248668 LALBAP00709 142 aa14.63□□□□□ -0.07
LRFN1-201ENST00000248668 IFI30P13284 250 aa14.63□□□□□ -0.07
LRFN1-201ENST00000248668 PRICKLE4Q2TBC4 344 aa14.63□□□□□ -0.07
LRFN1-201ENST00000248668 ZMAT1Q5H9K5 638 aa14.63□□□□□ -0.07
LRFN1-201ENST00000248668 SIGIRRQ6IA17 410 aa14.63□□□□□ -0.07
LRFN1-201ENST00000248668 GRAMD2AQ8IUY3 354 aa14.63□□□□□ -0.07
LRFN1-201ENST00000248668 ZNF655Q8N720 491 aaPredicted RBP14.63□□□□□ -0.07
LRFN1-201ENST00000248668 ZNF350Q9GZX5 532 aa14.63□□□□□ -0.07
LRFN1-201ENST00000248668 USP36Q9P275 1121 aaKnown RBP14.63□□□□□ -0.07
LRFN1-201ENST00000248668 STUB1Q9UNE7 303 aa14.63□□□□□ -0.07
LRFN1-201ENST00000248668 SPAG17Q6Q759 2223 aa14.63□□□□□ -0.07
LRFN1-201ENST00000248668 ALPK2Q86TB3 2170 aa14.63□□□□□ -0.07
LRFN1-201ENST00000248668 SSX4O60224 188 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 MAKP20794 623 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 GAS1P54826 345 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 EFNB1P98172 346 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 DECR1Q16698 335 aa14.62□□□□□ -0.07
LRFN1-201ENST00000248668 ZNF620Q6ZNG0 422 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms