RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 OR10H3O60404 316 aa10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 UGT2B11O75310 529 aa10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 TFPTP0C1Z6 253 aa10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 CT45A8P0DMV1 189 aa10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 CT45A9P0DMV2 189 aa10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 SELENOWP63302 87 aa10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 MGAT2Q10469 447 aa10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 ST3GAL3Q11203 375 aa10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 CT45A2Q5DJT8 189 aa10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 SPINK14Q6IE38 97 aa10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 FAM180AQ6UWF9 173 aa10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 RP1L1Q8IWN7 2480 aaPredicted RBP10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 MSRB3Q8IXL7 192 aa10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 TACO1Q9BSH4 297 aaKnown RBP10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 SLC24A3Q9HC58 644 aa10.24□□□□□ -0.77
TNFAIP3-201ENST00000237289 TNFRSF21O75509 655 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 MT-ND1P03886 318 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 MSX1P28360 303 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 CMIPQ8IY22 773 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 FDCSPQ8NFU4 85 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 OR52J3Q8NH60 311 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 MESP1Q9BRJ9 268 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 CHID1Q9BWS9 393 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 SPRY4Q9C004 299 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 TESMINQ9Y4I5 508 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 CHRM4P08173 479 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 PABPC4LP0CB38 370 aaKnown RBP10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 GANABQ14697 944 aaKnown RBP10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 DCST1Q5T197 706 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 NFAM1Q8NET5 270 aaPredicted RBP10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 ZNF559Q9BR84 538 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 EVA1AQ9H8M9 152 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 TAS2R10Q9NYW0 307 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 ABCD2Q9UBJ2 740 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 NCOR2Q9Y618 2525 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 OXSR1O95747 527 aaPredicted RBP10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 GKN3PP0CG01 181 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 DPP4P27487 766 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 CPOXP36551 454 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 CDH12P55289 794 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 TLE3Q04726 772 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 NR4A3Q92570 626 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 EPYCQ99645 322 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 WDR77Q9BQA1 342 aaPredicted RBP10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 FAM173AQ9BQD7 235 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 BCL2L10Q9HD36 194 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 AGPAT4Q9NRZ5 378 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 MED11Q9P086 117 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 ABCG2Q9UNQ0 655 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 USP22Q9UPT9 525 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 GADD45GO95257 159 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 IDH2P48735 452 aaKnown RBP10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 CASP6P55212 293 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 RCN1Q15293 331 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 TRIP10Q15642 601 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 ZDHHC13Q8IUH4 622 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 ZNF350Q9GZX5 532 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 ZNF639Q9UID6 485 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 ACAD8Q9UKU7 415 aa10.23□□□□□ -0.77
TNFAIP3-201ENST00000237289 TNFRSF11BO00300 401 aa10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 FRS3O43559 492 aa10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 EIF4E2O60573 245 aaKnown RBP10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 NID1P14543 1247 aa10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 HK1P19367 917 aa10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 ELAVL4P26378 380 aaKnown RBP10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 PRKAR1BP31321 381 aa10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 ZFP36L2P47974 494 aaKnown RBP10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 DNASE1L1P49184 302 aa10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 TTC33Q6PID6 262 aaPredicted RBP10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 ENPP6Q6UWR7 440 aa10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 CANT1Q8WVQ1 401 aa10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 SEMA4CQ9C0C4 833 aa10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 U3KQV3 271 aa10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 SPTBN4Q9H254 2564 aa10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 FAM166BA8MTA8 275 aa10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 M0R3H8 397 aa10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 PEX1O43933 1283 aa10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 ENTPD5O75356 428 aa10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 RASAL1O95294 804 aa10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 ZNF24P17028 368 aa10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 S1PR1P21453 382 aa10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 CD96P40200 585 aa10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 DUSP8Q13202 625 aa10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 FHL5Q5TD97 284 aa10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 NPSR1Q6W5P4 371 aa10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 VTCN1Q7Z7D3 282 aa10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 CHDHQ8NE62 594 aaPredicted RBP10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 OR4C3Q8NH37 302 aa10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 KLHL4Q9C0H6 718 aa10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 GORASP2Q9H8Y8 452 aa10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 KCNMB2Q9Y691 235 aa10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 AGAP5A6NIR3 686 aa10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 TIPRLO75663 272 aa10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 AHSA1O95433 338 aa10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 H1F0P07305 194 aaKnown RBP10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 SAGP10523 405 aaPredicted RBP10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 TBXA2RP21731 343 aa10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 OTUD3Q5T2D3 398 aaPredicted RBP10.22□□□□□ -0.77
TNFAIP3-201ENST00000237289 TYW3Q6IPR3 259 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms