RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 C17orf113A0A1B0GUU1 675 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 TMEM235A6NFC5 223 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 INSIG1O15503 277 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 SBK3P0C264 359 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 SNRPBP14678 240 aaKnown RBP12.14□□□□□ -0.47
VAMP4-201ENST00000236192 MAPK9P45984 424 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 GSG1Q2KHT4 349 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 PABPC1L2AQ5JQF8 200 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 RGMBQ6NW40 437 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 PLBD1Q6P4A8 553 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 PLA2G15Q8NCC3 412 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 TBC1D20Q96BZ9 403 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 MSLNLQ96KJ4 702 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 C1orf74Q96LT6 269 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 ZNF582Q96NG8 517 aaPredicted RBP12.14□□□□□ -0.47
VAMP4-201ENST00000236192 SLC6A7Q99884 636 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 MED9Q9NWA0 146 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 C14orf166Q9Y224 244 aaKnown RBP12.14□□□□□ -0.47
VAMP4-201ENST00000236192 OR6C68A6NDL8 312 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 MAT1AQ00266 395 aaKnown RBP12.14□□□□□ -0.47
VAMP4-201ENST00000236192 LY6KQ17RY6 165 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 C9orf64Q5T6V5 341 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 C8orf82Q6P1X6 216 aaPredicted RBP12.14□□□□□ -0.47
VAMP4-201ENST00000236192 SPICQ8N5J4 248 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 KCTD13Q8WZ19 329 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 ACTRT3Q9BYD9 372 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 SYNPO2LQ9H987 977 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 PCDHB9Q9Y5E1 797 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 CHD4Q14839 1912 aa12.14□□□□□ -0.47
VAMP4-201ENST00000236192 BAZ2AQ9UIF9 1905 aaKnown RBP12.13□□□□□ -0.47
VAMP4-201ENST00000236192 MCRIP1C9JLW8 97 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 M0R143 59 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 PSMD9O00233 223 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 BHLHE40O14503 412 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 BCL2L11O43521 198 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 PMS2P2O95744 297 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 ATP1B1P05026 303 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 ABCD3P28288 659 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 IRF4Q15306 451 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 EIPR1Q53HC9 387 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 TEX30Q5JUR7 227 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 OR6K6Q8NGW6 343 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 CRYGNQ8WXF5 182 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 TRMT61AQ96FX7 289 aaKnown RBP12.13□□□□□ -0.47
VAMP4-201ENST00000236192 ZNF559Q9BR84 538 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 EQTNQ9NQ60 294 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 BTNL2Q9UIR0 455 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 HMSDA8MTL9 139 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 GTPBP1O00178 669 aaKnown RBP12.13□□□□□ -0.47
VAMP4-201ENST00000236192 PRICKLE3O43900 615 aaPredicted RBP12.13□□□□□ -0.47
VAMP4-201ENST00000236192 MSCO60682 206 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 EPHX1P07099 455 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 LAP3P28838 519 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 BDKRB2P30411 391 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 OAZ1P54368 228 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 GLYR1Q49A26 553 aaPredicted RBP12.13□□□□□ -0.47
VAMP4-201ENST00000236192 PYCR3Q53H96 274 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 ZNF628Q5EBL2 1059 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 KDF1Q8NAX2 398 aaPredicted RBP12.13□□□□□ -0.47
VAMP4-201ENST00000236192 FAM71CQ8NEG0 241 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 PCDHGA2Q9Y5H1 932 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 FAM72CH0Y354 149 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 C1QAP02745 245 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 RNF224P0DH78 156 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 PRF1P14222 555 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 SHC1P29353 583 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 CRYBB2P43320 205 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 DGCR2P98153 550 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 RNASE10Q5GAN6 216 aaKnown RBP12.13□□□□□ -0.47
VAMP4-201ENST00000236192 FAM72AQ5TYM5 149 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 FAM72DQ6L9T8 149 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 B3GNT9Q6UX72 402 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 TMIGD1Q6UXZ0 262 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 FAM72BQ86X60 149 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 OR4K1Q8NGD4 311 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 C20orf24Q9BUV8 137 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 UBQLN3Q9H347 655 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 MARCH2Q9P0N8 246 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 LSM7Q9UK45 103 aaKnown RBP12.13□□□□□ -0.47
VAMP4-201ENST00000236192 ONECUT3O60422 494 aaPredicted RBP12.13□□□□□ -0.47
VAMP4-201ENST00000236192 RPP14O95059 124 aaKnown RBP12.13□□□□□ -0.47
VAMP4-201ENST00000236192 IGSF6O95976 241 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 OR8U9P0C7N5 309 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 RBMXP38159 391 aaKnown RBP12.13□□□□□ -0.47
VAMP4-201ENST00000236192 TAS2R31P59538 309 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 RGS7BPQ6MZT1 257 aaPredicted RBP12.13□□□□□ -0.47
VAMP4-201ENST00000236192 PNLDC1Q8NA58 520 aaKnown RBP12.13□□□□□ -0.47
VAMP4-201ENST00000236192 OR56B1Q8NGI3 324 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 DTD1Q8TEA8 209 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 NPRL2Q8WTW4 380 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 GAS2L1Q99501 681 aaPredicted RBP12.13□□□□□ -0.47
VAMP4-201ENST00000236192 NELFAQ9H3P2 528 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 NEUROD4Q9HD90 331 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 GPR160Q9UJ42 338 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 COL1A2P08123 1366 aa12.13□□□□□ -0.47
VAMP4-201ENST00000236192 A0A1B0GV50 99 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 TMEM82A0PJX8 343 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 GAPDHSO14556 408 aaPredicted RBP12.12□□□□□ -0.47
VAMP4-201ENST00000236192 PRRG1O14668 218 aa12.12□□□□□ -0.47
VAMP4-201ENST00000236192 HLA-AP01891 365 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms