RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 MCIDASD6RGH6 385 aa12.18□□□□□ -0.46
MSH2-201ENST00000233146 F5H5P2 479 aa12.18□□□□□ -0.46
MSH2-201ENST00000233146 YY2O15391 372 aa12.18□□□□□ -0.46
MSH2-201ENST00000233146 RAB4AP20338 218 aa12.18□□□□□ -0.46
MSH2-201ENST00000233146 ASMTP46597 345 aa12.18□□□□□ -0.46
MSH2-201ENST00000233146 MAXP61244 160 aa12.18□□□□□ -0.46
MSH2-201ENST00000233146 ZXDBP98169 803 aa12.18□□□□□ -0.46
MSH2-201ENST00000233146 SRSF11Q05519 484 aaKnown RBP12.18□□□□□ -0.46
MSH2-201ENST00000233146 MTFR2Q6P444 385 aa12.18□□□□□ -0.46
MSH2-201ENST00000233146 PRR18Q8N4B5 295 aa12.18□□□□□ -0.46
MSH2-201ENST00000233146 EDEM1Q92611 657 aa12.18□□□□□ -0.46
MSH2-201ENST00000233146 RSRP1Q9BUV0 290 aa12.18□□□□□ -0.46
MSH2-201ENST00000233146 ASF1BQ9NVP2 202 aa12.18□□□□□ -0.46
MSH2-201ENST00000233146 UBR3Q6ZT12 1888 aa12.18□□□□□ -0.46
MSH2-201ENST00000233146 A0A0G2JK05 382 aa12.18□□□□□ -0.46
MSH2-201ENST00000233146 KHDRBS3O75525 346 aaKnown RBP12.18□□□□□ -0.46
MSH2-201ENST00000233146 RGS9O75916 674 aaPredicted RBP12.18□□□□□ -0.46
MSH2-201ENST00000233146 GJB1P08034 283 aa12.18□□□□□ -0.46
MSH2-201ENST00000233146 HIST1H1BP16401 226 aaKnown RBP12.18□□□□□ -0.46
MSH2-201ENST00000233146 RAB5CP51148 216 aa12.18□□□□□ -0.46
MSH2-201ENST00000233146 CCR8P51685 355 aa12.18□□□□□ -0.46
MSH2-201ENST00000233146 ART1P52961 327 aa12.18□□□□□ -0.46
MSH2-201ENST00000233146 IL10RAQ13651 578 aa12.18□□□□□ -0.46
MSH2-201ENST00000233146 ZNF239Q16600 458 aaKnown RBP12.18□□□□□ -0.46
MSH2-201ENST00000233146 BAIAP2L2Q6UXY1 529 aa12.18□□□□□ -0.46
MSH2-201ENST00000233146 PRSS45Q7RTY3 260 aa12.18□□□□□ -0.46
MSH2-201ENST00000233146 OR4F15Q8NGB8 312 aa12.18□□□□□ -0.46
MSH2-201ENST00000233146 METTL9Q9H1A3 318 aa12.18□□□□□ -0.46
MSH2-201ENST00000233146 AUNIPQ9H7T9 357 aa12.18□□□□□ -0.46
MSH2-201ENST00000233146 ELOVL2Q9NXB9 296 aa12.18□□□□□ -0.46
MSH2-201ENST00000233146 MRPL15Q9P015 296 aaKnown RBP12.18□□□□□ -0.46
MSH2-201ENST00000233146 CAMK2AQ9UQM7 478 aa12.18□□□□□ -0.46
MSH2-201ENST00000233146 A0A0A6YYC8 382 aaPredicted RBP12.17□□□□□ -0.46
MSH2-201ENST00000233146 C1orf226A1L170 272 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 MARCH11A6NNE9 402 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 LOC730098B7Z3J9 87 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 I3L1I5 382 aaPredicted RBP12.17□□□□□ -0.46
MSH2-201ENST00000233146 NDUFS3O75489 264 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 MT-ND4LP03901 98 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 GKN3PP0CG01 181 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 OR10A3P58181 314 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 DOK7Q18PE1 504 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 TIGD5Q53EQ6 642 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 SBSNQ6UWP8 590 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 ZNF813Q6ZN06 617 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 RAB3CQ96E17 227 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 CDKN2AIPNLQ96HQ2 116 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 FDXACB1Q9BRP7 624 aaPredicted RBP12.17□□□□□ -0.46
MSH2-201ENST00000233146 GINS4Q9BRT9 223 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 SUV39H2Q9H5I1 410 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 NT5MQ9NPB1 228 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 FAM120CQ9NX05 1096 aaKnown RBP12.17□□□□□ -0.46
MSH2-201ENST00000233146 SPG21Q9NZD8 308 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 CORO2BQ9UQ03 480 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 RCE1Q9Y256 329 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 A0A0D9SG52 128 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 FFAR1O14842 300 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 MBP02144 154 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 PKMP14618 531 aaKnown RBP12.17□□□□□ -0.46
MSH2-201ENST00000233146 SHC1P29353 583 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 C21orf58P58505 322 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 NUTF2P61970 127 aaKnown RBP12.17□□□□□ -0.46
MSH2-201ENST00000233146 CRY2Q49AN0 593 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 SORCS1Q8WY21 1168 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 ZNF559Q9BR84 538 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 TGIF2Q9GZN2 237 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 POLR2J3Q9H1A7 115 aaKnown RBP12.17□□□□□ -0.46
MSH2-201ENST00000233146 ZNF70Q9UC06 446 aaPredicted RBP12.17□□□□□ -0.46
MSH2-201ENST00000233146 IGKV6-21A0A0C4DH24 114 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 RFPL4AA6NLU0 287 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 RFPL4AL1F8VTS6 287 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 FFAR2O15552 330 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 APBB3O95704 486 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 ANXA2P07355 339 aaKnown RBP12.17□□□□□ -0.46
MSH2-201ENST00000233146 NR2C1P13056 603 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 PRPS1L1P21108 318 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 PPIBP23284 216 aaKnown RBP12.17□□□□□ -0.46
MSH2-201ENST00000233146 TTLL4Q14679 1199 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 ZNF805Q5CZA5 627 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 TAPT1Q6NXT6 567 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 CRTC1Q6UUV9 634 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 OR8J2Q8NGG1 315 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 CLCC1Q96S66 551 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 SEMA6CQ9H3T2 930 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 UQCC1Q9NVA1 299 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 PTGFRNQ9P2B2 879 aa12.17□□□□□ -0.46
MSH2-201ENST00000233146 A0A087X0M5 115 aa12.16□□□□□ -0.46
MSH2-201ENST00000233146 A0A1B0GX30 115 aa12.16□□□□□ -0.46
MSH2-201ENST00000233146 PRODHO43272 600 aa12.16□□□□□ -0.46
MSH2-201ENST00000233146 PRMT3O60678 531 aa12.16□□□□□ -0.46
MSH2-201ENST00000233146 PDYNP01213 254 aa12.16□□□□□ -0.46
MSH2-201ENST00000233146 ADRB3P13945 408 aa12.16□□□□□ -0.46
MSH2-201ENST00000233146 GDF5P43026 501 aa12.16□□□□□ -0.46
MSH2-201ENST00000233146 LUMP51884 338 aaPredicted RBP12.16□□□□□ -0.46
MSH2-201ENST00000233146 DCAF12L2Q5VW00 463 aa12.16□□□□□ -0.46
MSH2-201ENST00000233146 JMJD6Q6NYC1 403 aaPredicted RBP12.16□□□□□ -0.46
MSH2-201ENST00000233146 MBOAT1Q6ZNC8 495 aa12.16□□□□□ -0.46
MSH2-201ENST00000233146 GPRC5AQ8NFJ5 357 aa12.16□□□□□ -0.46
MSH2-201ENST00000233146 PINK1Q9BXM7 581 aa12.16□□□□□ -0.46
MSH2-201ENST00000233146 ULBP1Q9BZM6 244 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms