RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 FAM111BQ6SJ93 734 aa17.32■□□□□ 0.36
CLIP2-201ENST00000223398 C6orf89Q6UWU4 347 aa17.32■□□□□ 0.36
CLIP2-201ENST00000223398 ETAA1Q9NY74 926 aa17.32■□□□□ 0.36
CLIP2-201ENST00000223398 PCDHGA10Q9Y5H3 936 aa17.32■□□□□ 0.36
CLIP2-201ENST00000223398 PEX14O75381 377 aa17.31■□□□□ 0.36
CLIP2-201ENST00000223398 GYPBP06028 91 aa17.31■□□□□ 0.36
CLIP2-201ENST00000223398 LCKP06239 509 aa17.31■□□□□ 0.36
CLIP2-201ENST00000223398 ANXA3P12429 323 aa17.31■□□□□ 0.36
CLIP2-201ENST00000223398 CRABP1P29762 137 aa17.31■□□□□ 0.36
CLIP2-201ENST00000223398 DMWDQ09019 674 aa17.31■□□□□ 0.36
CLIP2-201ENST00000223398 GRK1Q15835 563 aa17.31■□□□□ 0.36
CLIP2-201ENST00000223398 CNTN4Q8IWV2 1026 aa17.31■□□□□ 0.36
CLIP2-201ENST00000223398 UBQLN4Q9NRR5 601 aa17.31■□□□□ 0.36
CLIP2-201ENST00000223398 KCNIP1Q9NZI2 227 aa17.31■□□□□ 0.36
CLIP2-201ENST00000223398 PTBP2Q9UKA9 531 aaKnown RBP17.31■□□□□ 0.36
CLIP2-201ENST00000223398 MMP17Q9ULZ9 603 aa17.31■□□□□ 0.36
CLIP2-201ENST00000223398 H3BUI4 141 aa17.31■□□□□ 0.36
CLIP2-201ENST00000223398 MAGEA12P43365 314 aa17.31■□□□□ 0.36
CLIP2-201ENST00000223398 FRMD1Q8N878 549 aa17.31■□□□□ 0.36
CLIP2-201ENST00000223398 OR1E3Q8WZA6 343 aa17.31■□□□□ 0.36
CLIP2-201ENST00000223398 ACTR6Q9GZN1 396 aa17.31■□□□□ 0.36
CLIP2-201ENST00000223398 ZNF12P17014 697 aa17.31■□□□□ 0.36
CLIP2-201ENST00000223398 GPX3P22352 226 aa17.31■□□□□ 0.36
CLIP2-201ENST00000223398 FBXO27Q8NI29 283 aa17.31■□□□□ 0.36
CLIP2-201ENST00000223398 FGF22Q9HCT0 170 aa17.31■□□□□ 0.36
CLIP2-201ENST00000223398 S100A9P06702 114 aaKnown RBP17.31■□□□□ 0.36
CLIP2-201ENST00000223398 PSMA6P60900 246 aaKnown RBP17.31■□□□□ 0.36
CLIP2-201ENST00000223398 EIF5AP63241 154 aaKnown RBP17.31■□□□□ 0.36
CLIP2-201ENST00000223398 TMEM176BQ3YBM2 270 aaPredicted RBP17.31■□□□□ 0.36
CLIP2-201ENST00000223398 C18orf63Q68DL7 685 aa17.31■□□□□ 0.36
CLIP2-201ENST00000223398 PADI1Q9ULC6 663 aa17.31■□□□□ 0.36
CLIP2-201ENST00000223398 ANKRD28O15084 1053 aa17.31■□□□□ 0.36
CLIP2-201ENST00000223398 SLC19A2O60779 497 aa17.31■□□□□ 0.36
CLIP2-201ENST00000223398 NKX3-2P78367 333 aa17.31■□□□□ 0.36
CLIP2-201ENST00000223398 VHLLQ6RSH7 139 aa17.31■□□□□ 0.36
CLIP2-201ENST00000223398 ZNF595Q8IYB9 648 aa17.31■□□□□ 0.36
CLIP2-201ENST00000223398 BPIFA2Q96DR5 249 aa17.31■□□□□ 0.36
CLIP2-201ENST00000223398 TXLNGYQ9BZA5 131 aa17.31■□□□□ 0.36
CLIP2-201ENST00000223398 SMOXQ9NWM0 555 aa17.31■□□□□ 0.36
CLIP2-201ENST00000223398 TEX10Q9NXF1 929 aaPredicted RBP17.31■□□□□ 0.36
CLIP2-201ENST00000223398 ZNF443Q9Y2A4 671 aaPredicted RBP17.31■□□□□ 0.36
CLIP2-201ENST00000223398 SMCO3A2RU48 225 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 NUDT21O43809 227 aaKnown RBP17.3■□□□□ 0.36
CLIP2-201ENST00000223398 B3GALT4O96024 378 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 ICAM2P13598 275 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 LHCGRP22888 699 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 PITPNBP48739 271 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 TRA2BP62995 288 aaKnown RBP17.3■□□□□ 0.36
CLIP2-201ENST00000223398 LTB4RQ15722 352 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 TMEM52BQ4KMG9 183 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 DUSP19Q8WTR2 217 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 FAM46BQ96A09 425 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 PPP1R14BQ96C90 147 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 INIPQ9NRY2 104 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 C2CD4DB7Z1M9 353 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 KIAA0513O60268 411 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 SSR4P51571 173 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 POU3F1Q03052 451 aaPredicted RBP17.3■□□□□ 0.36
CLIP2-201ENST00000223398 CCSMST1Q4G0I0 132 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 TMEM53Q6P2H8 277 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 ZNF517Q6ZMY9 492 aaPredicted RBP17.3■□□□□ 0.36
CLIP2-201ENST00000223398 OR1J4Q8NGS1 313 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 RFT1Q96AA3 541 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 DNAJB11Q9UBS4 358 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 KCNIP3Q9Y2W7 256 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 HOXC11O43248 304 aaPredicted RBP17.3■□□□□ 0.36
CLIP2-201ENST00000223398 CHRM4P08173 479 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 HBA1P69905 142 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 TGFBR3Q03167 851 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 OR6Q1Q8NGQ2 317 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 OR14A16Q8NHC5 309 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 LINC01599Q8WXQ3 324 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 A6NIZ1 184 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 C12orf71A8MTZ7 269 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 IL32P24001 234 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 RAP1BP61224 184 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 RAP1AP62834 184 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 TNFRSF17Q02223 184 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 RAB11BQ15907 218 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 HES5Q5TA89 166 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 CPZQ66K79 652 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 LRRN1Q6UXK5 716 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 RAB11FIP2Q7L804 512 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 CHRDQ9H2X0 955 aa17.3■□□□□ 0.36
CLIP2-201ENST00000223398 ZNF749O43361 778 aa17.29■□□□□ 0.36
CLIP2-201ENST00000223398 MS4A2Q01362 244 aa17.29■□□□□ 0.36
CLIP2-201ENST00000223398 KCNAB1Q14722 419 aa17.29■□□□□ 0.36
CLIP2-201ENST00000223398 PAPD4Q6PIY7 484 aaKnown RBP17.29■□□□□ 0.36
CLIP2-201ENST00000223398 ZNF300Q96RE9 604 aaPredicted RBP17.29■□□□□ 0.36
CLIP2-201ENST00000223398 ZNF471Q9BX82 626 aaPredicted RBP17.29■□□□□ 0.36
CLIP2-201ENST00000223398 SPEF1Q9Y4P9 236 aa17.29■□□□□ 0.36
CLIP2-201ENST00000223398 TMEM202A6NGA9 273 aa17.29■□□□□ 0.36
CLIP2-201ENST00000223398 MEN1O00255 615 aa17.29■□□□□ 0.36
CLIP2-201ENST00000223398 ETV4P43268 484 aa17.29■□□□□ 0.36
CLIP2-201ENST00000223398 RRADP55042 308 aa17.29■□□□□ 0.36
CLIP2-201ENST00000223398 ENTPD8Q5MY95 495 aa17.29■□□□□ 0.36
CLIP2-201ENST00000223398 MMP21Q8N119 569 aa17.29■□□□□ 0.36
CLIP2-201ENST00000223398 SLC37A2Q8TED4 501 aa17.29■□□□□ 0.36
CLIP2-201ENST00000223398 C16orf58Q96GQ5 468 aa17.29■□□□□ 0.36
CLIP2-201ENST00000223398 PCDHB10Q9UN67 800 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms