RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Tinf2Q9QXG9 341 aa9.15□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 HraslsQ9QZU4 167 aa9.15□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Adamts5Q9R001 930 aa9.15□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Asb3Q9WV72 525 aa9.15□□□□□ -0.94
Pcdh1-201ENSMUST00000057185 Nlgn4lB0F2B4 945 aa9.15□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Slc22a28B2RT89 552 aa9.15□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Ap1arE9PYF7 298 aa9.15□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Nme6O88425 189 aa9.15□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Rln1P47932 185 aa9.15□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Nudt1P53368 156 aa9.15□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Arpc4P59999 168 aaKnown RBP9.15□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Actr1aP61164 376 aa9.15□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Gng2P63213 71 aa9.15□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Six5P70178 719 aa9.15□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Adra1aP97718 466 aa9.15□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Defb43Q30KM9 69 aa9.15□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Cxcl17Q5UW37 119 aa9.15□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Foxd3Q61060 465 aa9.15□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Ppp3r1Q63810 170 aa9.15□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Elfn2Q68FM6 823 aa9.15□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Znf503Q7TMA2 652 aa9.15□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Doc2aQ7TNF0 405 aa9.15□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Spag1Q80ZX8 901 aa9.15□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 DpcdQ8BPA8 203 aa9.15□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Gprin3Q8BWS5 763 aa9.15□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 EloaQ8CB77 773 aaKnown RBP9.15□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Kremen2Q8K1S7 461 aa9.15□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Actr1bQ8R5C5 376 aa9.15□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Gipc3Q8R5M0 297 aa9.15□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Olfr689Q8VG18 320 aa9.15□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Imp3Q921Y2 184 aaKnown RBP9.15□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Taar1Q923Y8 332 aa9.15□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Slc22a30Q96LX3 552 aa9.15□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Mbd3l1Q9D9H3 186 aa9.15□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Sertad3Q9ERC3 197 aa9.15□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Asic5Q9R0Y1 495 aa9.15□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 UxtQ9WTZ0 157 aa9.15□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Gm28557A0A087WQQ0 336 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Rhox2fA2ANE0 191 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Mthfd2lD3YZG8 338 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 4930595D18RikD3Z642 64 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Stxbp1O08599 594 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Slc10a1O08705 362 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Lhx8O35652 367 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Irf1P15314 329 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Efna1P52793 205 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Aqp8P56404 261 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Polr2cP97760 275 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Kcnk6Q3TBV4 313 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Slc30a10Q3UVU3 470 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Elavl3Q60900 367 aaKnown RBP9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Krba1Q6NXZ1 1043 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Kiaa0895Q7TQE7 519 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 AntxrlQ8BVM2 641 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Ugt2a3Q8BWQ1 534 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Pqlc3Q8C6U2 202 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 MepceQ8K3A9 666 aaKnown RBP9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Maf1Q9D0U6 258 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Atp5dQ9D3D9 168 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Slc6a19Q9D687 634 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 DynapQ9D7M5 161 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Med11Q9D8C6 117 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Mfsd2aQ9DA75 534 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Smim23Q9DAL0 136 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Elovl4Q9EQC4 312 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 PolmQ9JIW4 496 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Dclk1Q9JLM8 756 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Acox1Q9R0H0 661 aaKnown RBP9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Srd5a3Q9WUP4 330 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 BC025446A0A087WQT1 134 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Pramef6A2A8M8 474 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Zfp362B1ASA5 418 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Tcea1P10711 301 aaKnown RBP9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Mc3rP33033 323 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Cdh4P39038 913 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Fmo1P50285 532 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Drd2P61168 444 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Gch1Q05915 241 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 UbqlnlQ14DL0 610 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Arntl2Q2VPD4 579 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Ankub1Q3UUE9 192 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Pabpc2Q62029 628 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Lrp10Q7TQH7 713 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 SelenoiQ80TA1 398 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Gpr68Q8BFQ3 365 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Ces2eQ8BK48 559 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Mblac1Q8BWY4 260 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Unc5dQ8K1S2 956 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 DutQ8VCG1 200 aaKnown RBP9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Fam118aQ91YN1 357 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Ppp2r2dQ925E7 453 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Tm9sf3Q9ET30 587 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 PpieQ9QZH3 301 aaKnown RBP9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 SvilQ8K4L3 2170 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Olfr1034A0A1L1ST14 310 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Fam209A2APA5 170 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Gm13271B1AYH9 182 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 PtprhE9Q0N2 971 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Syn1O88935 706 aa9.14□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Atp1b1P14094 304 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 39.2 ms