RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Gjc3Q921C1 269 aa13.58□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Psat1Q99K85 370 aa13.58□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Nudt7Q99P30 236 aa13.58□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Q9D3J9 298 aa13.58□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Efcab1Q9D3N2 212 aa13.58□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Tvp23bQ9D8T4 205 aa13.58□□□□□ -0.24
Ercc1-201ENSMUST00000003645 1700080O16RikQ9D9G4 284 aa13.58□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Olfr44Q9EQB8 314 aa13.58□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Dnajb8Q9QYI7 227 aa13.58□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Wnt16Q9QYS1 364 aa13.58□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Osbpl10S4R1M9 766 aa13.58□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Gm8251F6VUT6 1994 aa13.57□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Trav8n-2A0A075B633 112 aa13.57□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Gm44973A0A140LJJ1 189 aa13.57□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Zfp969A2ART2 485 aa13.57□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Zfp973A2BE20 318 aa13.57□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Skint9A7TZG3 319 aa13.57□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Gm45711E0CXA2 391 aa13.57□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Ces2gE9PV38 560 aa13.57□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Pip5k1cO70161 661 aa13.57□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Ulk1O70405 1051 aa13.57□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Igk-V19-17P01633 149 aa13.57□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Zfp36P22893 319 aaKnown RBP13.57□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Klf16P58334 251 aa13.57□□□□□ -0.24
Ercc1-201ENSMUST00000003645 NfycP70353 335 aa13.57□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Wdr36Q3TAQ9 899 aaKnown RBP13.57□□□□□ -0.24
Ercc1-201ENSMUST00000003645 AktipQ64362 292 aa13.57□□□□□ -0.24
Ercc1-201ENSMUST00000003645 RimklaQ6PFX8 380 aa13.57□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Nipal3Q8BGN5 410 aa13.57□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Pomt2Q8BGQ4 820 aa13.57□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Cstf2Q8BIQ5 580 aaKnown RBP13.57□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Gucy1b2Q8BXH3 824 aa13.57□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Nuak2Q8BZN4 639 aa13.57□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Fam46bQ8C152 427 aa13.57□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Spata33Q8C624 132 aa13.57□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Batf2Q8R1H8 277 aa13.57□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Olfr883Q8VF64 309 aa13.57□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Mrgprb3Q91ZC1 312 aa13.57□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Stx11Q9D3G5 287 aa13.57□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Izumo1rQ9EQF4 244 aa13.57□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Mrpl46Q9EQI8 283 aa13.57□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Olfr49Q9Z1V0 313 aa13.57□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Mecp2Q9Z2D6 484 aaKnown RBP13.57□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Pde4dipQ80YT7 2224 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Gm5565A0A0G2JGB2 317 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Cela3aA2A9U8 283 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Olfr740E9PV79 311 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Olfr653E9PVA0 317 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Vmn2r50E9PW61 861 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Olfr750E9Q0Z1 331 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Olfr31E9Q3K2 317 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Gm17728E9Q5K2 132 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Olfr631F8VPJ9 319 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Vmn2r38G3UYA8 861 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Vmn2r33K7N705 861 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Suv39h1O54864 412 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 P01735 133 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Nudt19P11930 357 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Gsta3P30115 221 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Olfr13P34984 310 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Stmn2P55821 179 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Crnkl1P63154 690 aaKnown RBP13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Ext1P97464 746 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Col10a1Q05306 680 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Fthl17dQ3SXD1 176 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Kcnh1Q60603 989 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Aldh3b1Q80VQ0 468 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Hmbox1Q8BJA3 419 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Dusp28Q8BTR5 163 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Endod1Q8C522 501 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Vps50Q8CI71 964 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 SvilQ8K4L3 2170 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Olfr531Q8VGL2 304 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Olfr643Q8VGY1 314 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Fgfrl1Q91V87 529 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Mrgpra8Q91ZC4 305 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 PsphQ99LS3 225 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Nkd1Q99MH6 471 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Fthl17Q99MX2 176 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Fam32aQ9CR80 112 aaKnown RBP13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Psg23Q9D2U0 471 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Paip2Q9D6V8 124 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Med8Q9D7W5 268 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Dpep3Q9DA79 493 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Phf7Q9DAG9 307 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Psg21Q9DAV5 471 aa13.56□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Pcdh17E9PXF0 1157 aa13.55□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Ms4a7E9Q9V5 267 aa13.55□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Smim22J3QP37 91 aa13.55□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Atp1b1P14094 304 aaKnown RBP13.55□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Hspa1bP17879 642 aaKnown RBP13.55□□□□□ -0.24
Ercc1-201ENSMUST00000003645 CebpbP28033 296 aa13.55□□□□□ -0.24
Ercc1-201ENSMUST00000003645 CpoxP36552 443 aa13.55□□□□□ -0.24
Ercc1-201ENSMUST00000003645 HpcaP84075 193 aa13.55□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Lrrn4clQ3TYX2 239 aa13.55□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Fam160a2Q3U2I3 975 aa13.55□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Irgm1Q60766 409 aa13.55□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Olfr3Q60879 313 aa13.55□□□□□ -0.24
Ercc1-201ENSMUST00000003645 Awat2Q6E1M8 333 aa13.55□□□□□ -0.24
Ercc1-201ENSMUST00000003645 AY358078Q6UY53 465 aa13.55□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms