RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	LHX2	P50458	406 aa		13.62	□□□□□ -0.23
PHGDH-231	ENST00000641939	B3GALT5-AS1	P59052	145 aa		13.62	□□□□□ -0.23
PHGDH-231	ENST00000641939	PHC1	P78364	1004 aa		13.62	□□□□□ -0.23
PHGDH-231	ENST00000641939	SRY	Q05066	204 aa		13.62	□□□□□ -0.23
PHGDH-231	ENST00000641939	SLC25A35	Q3KQZ1	300 aa		13.62	□□□□□ -0.23
PHGDH-231	ENST00000641939	TTMP	Q5BVD1	217 aa		13.62	□□□□□ -0.23
PHGDH-231	ENST00000641939	SPANXN4	Q5MJ08	99 aa		13.62	□□□□□ -0.23
PHGDH-231	ENST00000641939	CCNJ	Q5T5M9	372 aa		13.62	□□□□□ -0.23
PHGDH-231	ENST00000641939	HDX	Q7Z353	690 aa		13.62	□□□□□ -0.23
PHGDH-231	ENST00000641939	ANKRD46	Q86W74	232 aa		13.62	□□□□□ -0.23
PHGDH-231	ENST00000641939	ACBD4	Q8NC06	268 aa		13.62	□□□□□ -0.23
PHGDH-231	ENST00000641939	TNIP2	Q8NFZ5	429 aa		13.62	□□□□□ -0.23
PHGDH-231	ENST00000641939	OR4A15	Q8NGL6	344 aa		13.62	□□□□□ -0.23
PHGDH-231	ENST00000641939	PIWIL2	Q8TC59	973 aa	Known RBP	13.62	□□□□□ -0.23
PHGDH-231	ENST00000641939	C1GALT1C1	Q96EU7	318 aa		13.62	□□□□□ -0.23
PHGDH-231	ENST00000641939	TUBA1C	Q9BQE3	449 aa		13.62	□□□□□ -0.23
PHGDH-231	ENST00000641939	AIG1	Q9NVV5	245 aa		13.62	□□□□□ -0.23
PHGDH-231	ENST00000641939	HEATR5A	Q86XA9	2040 aa		13.62	□□□□□ -0.23
PHGDH-231	ENST00000641939	TACC2	O95359	2948 aa		13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939	RNF103-CHMP3	A0A140T963	221 aa		13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939	MBD3L4	A6NDZ8	208 aa	Predicted RBP	13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939	MBD3L3	A6NE82	208 aa	Predicted RBP	13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939	MBD3L5	A6NJ08	208 aa	Predicted RBP	13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939	SCD	O00767	359 aa		13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939	CPSF4	O95639	269 aa	Known RBP	13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939	H2AFX	P16104	143 aa	Predicted RBP	13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939	ZNF708	P17019	499 aa		13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939	MSX1	P28360	303 aa		13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939	S100A3	P33764	101 aa		13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939	NME5	P56597	212 aa		13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939	CLDN18	P56856	261 aa		13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939	UFM1	P61960	85 aa		13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939	BCL2A1	Q16548	175 aa		13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939	FAM174B	Q3ZCQ3	159 aa		13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939	GLYR1	Q49A26	553 aa	Predicted RBP	13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939	DCST2	Q5T1A1	773 aa		13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939	RAET1L	Q5VY80	246 aa		13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939	NXN	Q6DKJ4	435 aa		13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939	MEX3B	Q6ZN04	569 aa	Known RBP	13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939	C6orf120	Q7Z4R8	191 aa		13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939	LIX1L	Q8IVB5	337 aa		13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939	MISP	Q8IVT2	679 aa		13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939	GOLGA6L1	Q8N7Z2	621 aa		13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939	NAXE	Q8NCW5	288 aa		13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939	MAEL	Q96JY0	434 aa	Known RBP	13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939	SLC35G5	Q96KT7	338 aa		13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939	TEX37	Q96LM6	180 aa		13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939	OR7D2	Q96RA2	312 aa		13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939	SH3GL2	Q99962	352 aa		13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939	TREX2	Q9BQ50	279 aa	Predicted RBP	13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939	VIPAS39	Q9H9C1	493 aa		13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939	NPDC1	Q9NQX5	325 aa	Predicted RBP	13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939	GPR45	Q9Y5Y3	372 aa		13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939	KCNE3	Q9Y6H6	103 aa		13.61	□□□□□ -0.23
PHGDH-231	ENST00000641939		A0A1W2PQD3	144 aa		13.6	□□□□□ -0.23
PHGDH-231	ENST00000641939	DUXA	A6NLW8	204 aa		13.6	□□□□□ -0.23
PHGDH-231	ENST00000641939	LINC01387	J3KSC0	135 aa		13.6	□□□□□ -0.23
PHGDH-231	ENST00000641939	DVL2	O14641	736 aa		13.6	□□□□□ -0.23
PHGDH-231	ENST00000641939	GMFG	O60234	142 aa		13.6	□□□□□ -0.23
PHGDH-231	ENST00000641939	PEPD	P12955	493 aa		13.6	□□□□□ -0.23
PHGDH-231	ENST00000641939	IGFBP2	P18065	325 aa		13.6	□□□□□ -0.23
PHGDH-231	ENST00000641939	MATN1	P21941	496 aa		13.6	□□□□□ -0.23
PHGDH-231	ENST00000641939	UQCRC2	P22695	453 aa		13.6	□□□□□ -0.23
PHGDH-231	ENST00000641939	RPS26	P62854	115 aa	Known RBP	13.6	□□□□□ -0.23
PHGDH-231	ENST00000641939	SLC9B1	Q4ZJI4	515 aa		13.6	□□□□□ -0.23
PHGDH-231	ENST00000641939	MAVS	Q7Z434	540 aa		13.6	□□□□□ -0.23
PHGDH-231	ENST00000641939	GDF7	Q7Z4P5	450 aa		13.6	□□□□□ -0.23
PHGDH-231	ENST00000641939	ADGRE4P	Q86SQ3	457 aa		13.6	□□□□□ -0.23
PHGDH-231	ENST00000641939	CLEC4F	Q8N1N0	589 aa		13.6	□□□□□ -0.23
PHGDH-231	ENST00000641939	GATS	Q8NAP1	163 aa		13.6	□□□□□ -0.23
PHGDH-231	ENST00000641939	ZNF527	Q8NB42	609 aa		13.6	□□□□□ -0.23
PHGDH-231	ENST00000641939	OR5D16	Q8NGK9	328 aa		13.6	□□□□□ -0.23
PHGDH-231	ENST00000641939	GOT1L1	Q8NHS2	421 aa	Predicted RBP	13.6	□□□□□ -0.23
PHGDH-231	ENST00000641939	ACTRT2	Q8TDY3	377 aa		13.6	□□□□□ -0.23
PHGDH-231	ENST00000641939	UCN2	Q96RP3	112 aa		13.6	□□□□□ -0.23
PHGDH-231	ENST00000641939	PIGQ	Q9BRB3	760 aa		13.6	□□□□□ -0.23
PHGDH-231	ENST00000641939	TRIM8	Q9BZR9	551 aa		13.6	□□□□□ -0.23
PHGDH-231	ENST00000641939	HOXD1	Q9GZZ0	328 aa		13.6	□□□□□ -0.23
PHGDH-231	ENST00000641939	SERHL2	Q9H4I8	314 aa		13.6	□□□□□ -0.23
PHGDH-231	ENST00000641939	ZNF629	Q9UEG4	869 aa	Predicted RBP	13.6	□□□□□ -0.23
PHGDH-231	ENST00000641939	MYO9A	B2RTY4	2548 aa		13.6	□□□□□ -0.23
PHGDH-231	ENST00000641939	MPDZ	O75970	2070 aa		13.6	□□□□□ -0.23
PHGDH-231	ENST00000641939	POLQ	O75417	2590 aa		13.6	□□□□□ -0.23
PHGDH-231	ENST00000641939	FBN2	P35556	2912 aa		13.6	□□□□□ -0.23
PHGDH-231	ENST00000641939		A0A087WZY1	265 aa		13.59	□□□□□ -0.23
PHGDH-231	ENST00000641939	OR2M5	A3KFT3	312 aa		13.59	□□□□□ -0.23
PHGDH-231	ENST00000641939	CLCA1	A8K7I4	914 aa		13.59	□□□□□ -0.23
PHGDH-231	ENST00000641939	HMGB1P1	B2RPK0	211 aa	Predicted RBP	13.59	□□□□□ -0.23
PHGDH-231	ENST00000641939	ZNF195	O14628	629 aa		13.59	□□□□□ -0.23
PHGDH-231	ENST00000641939	IDO1	P14902	403 aa		13.59	□□□□□ -0.23
PHGDH-231	ENST00000641939	POU3F2	P20265	443 aa	Predicted RBP	13.59	□□□□□ -0.23
PHGDH-231	ENST00000641939	BMP5	P22003	454 aa		13.59	□□□□□ -0.23
PHGDH-231	ENST00000641939	IL12A	P29459	219 aa		13.59	□□□□□ -0.23
PHGDH-231	ENST00000641939	ZNF136	P52737	540 aa		13.59	□□□□□ -0.23
PHGDH-231	ENST00000641939	FLYWCH1	Q4VC44	716 aa		13.59	□□□□□ -0.23
PHGDH-231	ENST00000641939	ARSK	Q6UWY0	536 aa		13.59	□□□□□ -0.23
PHGDH-231	ENST00000641939	C9orf106	Q8NAJ2	232 aa		13.59	□□□□□ -0.23
PHGDH-231	ENST00000641939	GLB1L3	Q8NCI6	653 aa	Predicted RBP	13.59	□□□□□ -0.23
PHGDH-231	ENST00000641939	OR5M1	Q8NGP8	315 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms