RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 STACQ99469 402 aa17.12■□□□□ 0.33
CLN6-221ENST00000637494 BTBD2Q9BX70 525 aa17.12■□□□□ 0.33
CLN6-221ENST00000637494 PINK1Q9BXM7 581 aa17.12■□□□□ 0.33
CLN6-221ENST00000637494 RTN4RQ9BZR6 473 aa17.12■□□□□ 0.33
CLN6-221ENST00000637494 NEUROD4Q9HD90 331 aa17.12■□□□□ 0.33
CLN6-221ENST00000637494 SSU72Q9NP77 194 aaKnown RBP17.12■□□□□ 0.33
CLN6-221ENST00000637494 DUSP22Q9NRW4 184 aa17.12■□□□□ 0.33
CLN6-221ENST00000637494 NOP53Q9NZM5 478 aaKnown RBP17.12■□□□□ 0.33
CLN6-221ENST00000637494 VDAC3Q9Y277 283 aa17.12■□□□□ 0.33
CLN6-221ENST00000637494 A0A1W2PNV4 684 aa17.11■□□□□ 0.33
CLN6-221ENST00000637494 B4DXG7 233 aa17.11■□□□□ 0.33
CLN6-221ENST00000637494 SMNDC1O75940 238 aaKnown RBP eCLIP17.11■□□□□ 0.33
CLN6-221ENST00000637494 TGM6O95932 706 aa17.11■□□□□ 0.33
CLN6-221ENST00000637494 FCGR2AP12318 317 aa17.11■□□□□ 0.33
CLN6-221ENST00000637494 ZNF17P17021 662 aa17.11■□□□□ 0.33
CLN6-221ENST00000637494 DNAJA1P31689 397 aaKnown RBP17.11■□□□□ 0.33
CLN6-221ENST00000637494 ART1P52961 327 aa17.11■□□□□ 0.33
CLN6-221ENST00000637494 ZNF844Q08AG5 666 aa17.11■□□□□ 0.33
CLN6-221ENST00000637494 TP53BP2Q13625 1128 aa17.11■□□□□ 0.33
CLN6-221ENST00000637494 FGFBP1Q14512 234 aa17.11■□□□□ 0.33
CLN6-221ENST00000637494 LASP1Q14847 261 aaKnown RBP17.11■□□□□ 0.33
CLN6-221ENST00000637494 DAZAP2Q15038 168 aaPredicted RBP17.11■□□□□ 0.33
CLN6-221ENST00000637494 CHI3L2Q15782 390 aa17.11■□□□□ 0.33
CLN6-221ENST00000637494 SMU1Q2TAY7 513 aa17.11■□□□□ 0.33
CLN6-221ENST00000637494 PLXDC2Q6UX71 529 aa17.11■□□□□ 0.33
CLN6-221ENST00000637494 ZNF527Q8NB42 609 aa17.11■□□□□ 0.33
CLN6-221ENST00000637494 OR5M1Q8NGP8 315 aa17.11■□□□□ 0.33
CLN6-221ENST00000637494 OR4C3Q8NH37 302 aa17.11■□□□□ 0.33
CLN6-221ENST00000637494 FAM110BQ8TC76 370 aa17.11■□□□□ 0.33
CLN6-221ENST00000637494 ADAMTS15Q8TE58 950 aa17.11■□□□□ 0.33
CLN6-221ENST00000637494 NINJ1Q92982 152 aa17.11■□□□□ 0.33
CLN6-221ENST00000637494 C16orf58Q96GQ5 468 aa17.11■□□□□ 0.33
CLN6-221ENST00000637494 PKNOX2Q96KN3 472 aa17.11■□□□□ 0.33
CLN6-221ENST00000637494 ACTRT3Q9BYD9 372 aa17.11■□□□□ 0.33
CLN6-221ENST00000637494 PRRG4Q9BZD6 226 aa17.11■□□□□ 0.33
CLN6-221ENST00000637494 BHLHE41Q9C0J9 482 aaPredicted RBP17.11■□□□□ 0.33
CLN6-221ENST00000637494 PIGUQ9H490 435 aa17.11■□□□□ 0.33
CLN6-221ENST00000637494 GIN1Q9NXP7 522 aa17.11■□□□□ 0.33
CLN6-221ENST00000637494 GALNT8Q9NY28 637 aa17.11■□□□□ 0.33
CLN6-221ENST00000637494 NDRG3Q9UGV2 375 aa17.11■□□□□ 0.33
CLN6-221ENST00000637494 ZNF175Q9Y473 711 aa17.11■□□□□ 0.33
CLN6-221ENST00000637494 KIAA1549Q9HCM3 1950 aa17.11■□□□□ 0.33
CLN6-221ENST00000637494 H3BNH8 94 aa17.1■□□□□ 0.33
CLN6-221ENST00000637494 CASKO14936 926 aa17.1■□□□□ 0.33
CLN6-221ENST00000637494 DNASE1P24855 282 aa17.1■□□□□ 0.33
CLN6-221ENST00000637494 CPOXP36551 454 aa17.1■□□□□ 0.33
CLN6-221ENST00000637494 ABCE1P61221 599 aaKnown RBP17.1■□□□□ 0.33
CLN6-221ENST00000637494 OCRLQ01968 901 aa17.1■□□□□ 0.33
CLN6-221ENST00000637494 EMX2Q04743 252 aa17.1■□□□□ 0.33
CLN6-221ENST00000637494 PDCD2Q16342 344 aaPredicted RBP17.1■□□□□ 0.33
CLN6-221ENST00000637494 PPP4R4Q6NUP7 873 aa17.1■□□□□ 0.33
CLN6-221ENST00000637494 CDC73Q6P1J9 531 aa17.1■□□□□ 0.33
CLN6-221ENST00000637494 APOOLQ6UXV4 268 aa17.1■□□□□ 0.33
CLN6-221ENST00000637494 SPNS3Q6ZMD2 512 aa17.1■□□□□ 0.33
CLN6-221ENST00000637494 GATSQ8NAP1 163 aa17.1■□□□□ 0.33
CLN6-221ENST00000637494 LINC01560Q8TB33 94 aa17.1■□□□□ 0.33
CLN6-221ENST00000637494 SFXN5Q8TD22 340 aa17.1■□□□□ 0.33
CLN6-221ENST00000637494 CDS1Q92903 461 aa17.1■□□□□ 0.33
CLN6-221ENST00000637494 ZBTB8AQ96BR9 441 aa17.1■□□□□ 0.33
CLN6-221ENST00000637494 COQ8BQ96D53 544 aa17.1■□□□□ 0.33
CLN6-221ENST00000637494 DUSP26Q9BV47 211 aa17.1■□□□□ 0.33
CLN6-221ENST00000637494 HOXD1Q9GZZ0 328 aa17.1■□□□□ 0.33
CLN6-221ENST00000637494 KCNK9Q9NPC2 374 aa17.1■□□□□ 0.33
CLN6-221ENST00000637494 SIRT3Q9NTG7 399 aaPredicted RBP17.1■□□□□ 0.33
CLN6-221ENST00000637494 PAQR5Q9NXK6 330 aaPredicted RBP17.1■□□□□ 0.33
CLN6-221ENST00000637494 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.1■□□□□ 0.33
CLN6-221ENST00000637494 DOCK7Q96N67 2140 aa17.09■□□□□ 0.33
CLN6-221ENST00000637494 A0A1W2PQD3 144 aa17.09■□□□□ 0.33
CLN6-221ENST00000637494 MSTNO14793 375 aa17.09■□□□□ 0.33
CLN6-221ENST00000637494 C6orf47O95873 294 aa17.09■□□□□ 0.33
CLN6-221ENST00000637494 ME2P23368 584 aa17.09■□□□□ 0.33
CLN6-221ENST00000637494 ARRB2P32121 409 aa17.09■□□□□ 0.33
CLN6-221ENST00000637494 SOAT1P35610 550 aa17.09■□□□□ 0.33
CLN6-221ENST00000637494 CLDN15P56746 228 aa17.09■□□□□ 0.33
CLN6-221ENST00000637494 PON3Q15166 354 aa17.09■□□□□ 0.33
CLN6-221ENST00000637494 PGS1Q32NB8 556 aa17.09■□□□□ 0.33
CLN6-221ENST00000637494 CEP85LQ5SZL2 805 aa17.09■□□□□ 0.33
CLN6-221ENST00000637494 PDSS1Q5T2R2 415 aa17.09■□□□□ 0.33
CLN6-221ENST00000637494 CCNJQ5T5M9 372 aa17.09■□□□□ 0.33
CLN6-221ENST00000637494 WDR75Q8IWA0 830 aaKnown RBP17.09■□□□□ 0.33
CLN6-221ENST00000637494 KRTCAP2Q8N6L1 136 aa17.09■□□□□ 0.33
CLN6-221ENST00000637494 PSMA8Q8TAA3 256 aa17.09■□□□□ 0.33
CLN6-221ENST00000637494 ACTRT2Q8TDY3 377 aa17.09■□□□□ 0.33
CLN6-221ENST00000637494 OTUB1Q96FW1 271 aaPredicted RBP17.09■□□□□ 0.33
CLN6-221ENST00000637494 PCDHGB4Q9UN71 923 aa17.09■□□□□ 0.33
CLN6-221ENST00000637494 RAP2CQ9Y3L5 183 aa17.09■□□□□ 0.33
CLN6-221ENST00000637494 OTOGQ6ZRI0 2925 aa17.09■□□□□ 0.33
CLN6-221ENST00000637494 CSMD1Q96PZ7 3565 aa17.09■□□□□ 0.33
CLN6-221ENST00000637494 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.08■□□□□ 0.32
CLN6-221ENST00000637494 FAM221AA4D161 298 aa17.08■□□□□ 0.32
CLN6-221ENST00000637494 A8MXE2 369 aa17.08■□□□□ 0.32
CLN6-221ENST00000637494 EIF1AYO14602 144 aaKnown RBP17.08■□□□□ 0.32
CLN6-221ENST00000637494 TNFSF13O75888 250 aa17.08■□□□□ 0.32
CLN6-221ENST00000637494 G6PDP11413 515 aa17.08■□□□□ 0.32
CLN6-221ENST00000637494 RPL14P50914 215 aaKnown RBP17.08■□□□□ 0.32
CLN6-221ENST00000637494 SUCLG1P53597 346 aaKnown RBP17.08■□□□□ 0.32
CLN6-221ENST00000637494 CLDN8P56748 225 aa17.08■□□□□ 0.32
CLN6-221ENST00000637494 CLDN20P56880 219 aa17.08■□□□□ 0.32
CLN6-221ENST00000637494 TESK1Q15569 626 aa17.08■□□□□ 0.32
CLN6-221ENST00000637494 MTERF4Q7Z6M4 381 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms