RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 MCCC2Q9HCC0 563 aa12.5□□□□□ -0.41
PNKP-228ENST00000637325 UBQLN4Q9NRR5 601 aa12.5□□□□□ -0.41
PNKP-228ENST00000637325 DUSP22Q9NRW4 184 aa12.5□□□□□ -0.41
PNKP-228ENST00000637325 KCNN3Q9UGI6 736 aa12.5□□□□□ -0.41
PNKP-228ENST00000637325 ABCA4P78363 2273 aa12.5□□□□□ -0.41
PNKP-228ENST00000637325 TACC2O95359 2948 aa12.5□□□□□ -0.41
PNKP-228ENST00000637325 CCDC168Q8NDH2 2452 aa12.49□□□□□ -0.41
PNKP-228ENST00000637325 B4DXG7 233 aa12.49□□□□□ -0.41
PNKP-228ENST00000637325 ALG1L2C9J202 215 aa12.49□□□□□ -0.41
PNKP-228ENST00000637325 LINC01387J3KSC0 135 aa12.49□□□□□ -0.41
PNKP-228ENST00000637325 SYT5O00445 386 aa12.49□□□□□ -0.41
PNKP-228ENST00000637325 SOX30O94993 753 aa12.49□□□□□ -0.41
PNKP-228ENST00000637325 NGFRP08138 427 aa12.49□□□□□ -0.41
PNKP-228ENST00000637325 ZNF708P17019 499 aa12.49□□□□□ -0.41
PNKP-228ENST00000637325 TBXA2RP21731 343 aa12.49□□□□□ -0.41
PNKP-228ENST00000637325 PEX19P40855 299 aa12.49□□□□□ -0.41
PNKP-228ENST00000637325 CLDN18P56856 261 aa12.49□□□□□ -0.41
PNKP-228ENST00000637325 WDR4P57081 412 aaKnown RBP12.49□□□□□ -0.41
PNKP-228ENST00000637325 C21orf58P58505 322 aa12.49□□□□□ -0.41
PNKP-228ENST00000637325 B3GALT5-AS1P59052 145 aa12.49□□□□□ -0.41
PNKP-228ENST00000637325 BCL2A1Q16548 175 aa12.49□□□□□ -0.41
PNKP-228ENST00000637325 GLYR1Q49A26 553 aaPredicted RBP12.49□□□□□ -0.41
PNKP-228ENST00000637325 BEND6Q5SZJ8 279 aaPredicted RBP12.49□□□□□ -0.41
PNKP-228ENST00000637325 ATG16L1Q676U5 607 aa12.49□□□□□ -0.41
PNKP-228ENST00000637325 OR4F3Q6IEY1 312 aa12.49□□□□□ -0.41
PNKP-228ENST00000637325 APOOLQ6UXV4 268 aa12.49□□□□□ -0.41
PNKP-228ENST00000637325 VPS37AQ8NEZ2 397 aa12.49□□□□□ -0.41
PNKP-228ENST00000637325 OR4C3Q8NH37 302 aa12.49□□□□□ -0.41
PNKP-228ENST00000637325 OR5AK3PQ8NH89 298 aa12.49□□□□□ -0.41
PNKP-228ENST00000637325 PSMA8Q8TAA3 256 aa12.49□□□□□ -0.41
PNKP-228ENST00000637325 SMPDL3BQ92485 455 aa12.49□□□□□ -0.41
PNKP-228ENST00000637325 RNASE6Q93091 150 aaKnown RBP12.49□□□□□ -0.41
PNKP-228ENST00000637325 WNT2BQ93097 391 aa12.49□□□□□ -0.41
PNKP-228ENST00000637325 ZFP3Q96NJ6 502 aa12.49□□□□□ -0.41
PNKP-228ENST00000637325 TMBIM4Q9HC24 238 aa12.49□□□□□ -0.41
PNKP-228ENST00000637325 THAP1Q9NVV9 213 aa12.49□□□□□ -0.41
PNKP-228ENST00000637325 FBXO34Q9NWN3 711 aa12.49□□□□□ -0.41
PNKP-228ENST00000637325 GIN1Q9NXP7 522 aa12.49□□□□□ -0.41
PNKP-228ENST00000637325 STOML1Q9UBI4 398 aa12.49□□□□□ -0.41
PNKP-228ENST00000637325 HAO1Q9UJM8 370 aa12.49□□□□□ -0.41
PNKP-228ENST00000637325 ZNF337Q9Y3M9 751 aa12.49□□□□□ -0.41
PNKP-228ENST00000637325 IGLV3-32A0A0A0MS00 114 aa12.48□□□□□ -0.41
PNKP-228ENST00000637325 OR2M5A3KFT3 312 aa12.48□□□□□ -0.41
PNKP-228ENST00000637325 EEF1E1-BLOC1S5C9J1V9 151 aa12.48□□□□□ -0.41
PNKP-228ENST00000637325 H3BML4 177 aa12.48□□□□□ -0.41
PNKP-228ENST00000637325 SEC14L5O43304 696 aa12.48□□□□□ -0.41
PNKP-228ENST00000637325 EEF1E1O43324 174 aaKnown RBP12.48□□□□□ -0.41
PNKP-228ENST00000637325 RCBTB2O95199 551 aa12.48□□□□□ -0.41
PNKP-228ENST00000637325 CPSF4O95639 269 aaKnown RBP12.48□□□□□ -0.41
PNKP-228ENST00000637325 IL18BPO95998 194 aa12.48□□□□□ -0.41
PNKP-228ENST00000637325 KITP10721 976 aa12.48□□□□□ -0.41
PNKP-228ENST00000637325 CAPN3P20807 821 aa12.48□□□□□ -0.41
PNKP-228ENST00000637325 MATN1P21941 496 aa12.48□□□□□ -0.41
PNKP-228ENST00000637325 KIR2DL3P43628 341 aa12.48□□□□□ -0.41
PNKP-228ENST00000637325 DLX5P56178 289 aa12.48□□□□□ -0.41
PNKP-228ENST00000637325 HBA1P69905 142 aa12.48□□□□□ -0.41
PNKP-228ENST00000637325 SNTB1Q13884 538 aaKnown RBP12.48□□□□□ -0.41
PNKP-228ENST00000637325 PLXDC2Q6UX71 529 aa12.48□□□□□ -0.41
PNKP-228ENST00000637325 CAMKMTQ7Z624 323 aa12.48□□□□□ -0.41
PNKP-228ENST00000637325 ZAR1Q86SH2 424 aa12.48□□□□□ -0.41
PNKP-228ENST00000637325 MISPQ8IVT2 679 aa12.48□□□□□ -0.41
PNKP-228ENST00000637325 LRRC34Q8IZ02 419 aa12.48□□□□□ -0.41
PNKP-228ENST00000637325 ZNF527Q8NB42 609 aa12.48□□□□□ -0.41
PNKP-228ENST00000637325 OR4A15Q8NGL6 344 aa12.48□□□□□ -0.41
PNKP-228ENST00000637325 INTS12Q96CB8 462 aaKnown RBP12.48□□□□□ -0.41
PNKP-228ENST00000637325 SH3YL1Q96HL8 342 aaPredicted RBP12.48□□□□□ -0.41
PNKP-228ENST00000637325 UCN2Q96RP3 112 aa12.48□□□□□ -0.41
PNKP-228ENST00000637325 HOXD1Q9GZZ0 328 aa12.48□□□□□ -0.41
PNKP-228ENST00000637325 ACBD3Q9H3P7 528 aa12.48□□□□□ -0.41
PNKP-228ENST00000637325 MEAF6Q9HAF1 191 aa12.48□□□□□ -0.41
PNKP-228ENST00000637325 FOXD3Q9UJU5 478 aaPredicted RBP12.48□□□□□ -0.41
PNKP-228ENST00000637325 VDAC3Q9Y277 283 aa12.48□□□□□ -0.41
PNKP-228ENST00000637325 FBN2P35556 2912 aa12.48□□□□□ -0.41
PNKP-228ENST00000637325 A0A087WZY1 265 aa12.47□□□□□ -0.41
PNKP-228ENST00000637325 TRPC5OSA6NMA1 111 aa12.47□□□□□ -0.41
PNKP-228ENST00000637325 H3BNH8 94 aa12.47□□□□□ -0.41
PNKP-228ENST00000637325 RNASET2O00584 256 aaKnown RBP12.47□□□□□ -0.41
PNKP-228ENST00000637325 ZNF41P51814 821 aaPredicted RBP12.47□□□□□ -0.41
PNKP-228ENST00000637325 CLNS1AP54105 237 aaKnown RBP12.47□□□□□ -0.41
PNKP-228ENST00000637325 SLC18A1P54219 525 aa12.47□□□□□ -0.41
PNKP-228ENST00000637325 RPS3AP61247 264 aaKnown RBP12.47□□□□□ -0.41
PNKP-228ENST00000637325 EEF1A1P68104 462 aaKnown RBP12.47□□□□□ -0.41
PNKP-228ENST00000637325 EXOSC6Q5RKV6 272 aaKnown RBP12.47□□□□□ -0.41
PNKP-228ENST00000637325 DCST2Q5T1A1 773 aa12.47□□□□□ -0.41
PNKP-228ENST00000637325 ANXA8L1Q5VT79 327 aa12.47□□□□□ -0.41
PNKP-228ENST00000637325 EEF1A1P5Q5VTE0 462 aa12.47□□□□□ -0.41
PNKP-228ENST00000637325 POMZP3Q6PJE2 187 aa12.47□□□□□ -0.41
PNKP-228ENST00000637325 C6orf120Q7Z4R8 191 aa12.47□□□□□ -0.41
PNKP-228ENST00000637325 ADGRE4PQ86SQ3 457 aa12.47□□□□□ -0.41
PNKP-228ENST00000637325 TMEM200AQ86VY9 491 aa12.47□□□□□ -0.41
PNKP-228ENST00000637325 KIF18BQ86Y91 864 aa12.47□□□□□ -0.41
PNKP-228ENST00000637325 LURAP1LQ8IV03 231 aa12.47□□□□□ -0.41
PNKP-228ENST00000637325 CLECL1Q8IZS7 167 aa12.47□□□□□ -0.41
PNKP-228ENST00000637325 OR8J2Q8NGG1 315 aa12.47□□□□□ -0.41
PNKP-228ENST00000637325 B4GALNT2Q8NHY0 566 aa12.47□□□□□ -0.41
PNKP-228ENST00000637325 PHOSPHO1Q8TCT1 267 aa12.47□□□□□ -0.41
PNKP-228ENST00000637325 SLC35G5Q96KT7 338 aa12.47□□□□□ -0.41
PNKP-228ENST00000637325 OR7D2Q96RA2 312 aa12.47□□□□□ -0.41
PNKP-228ENST00000637325 SFXN3Q9BWM7 321 aa12.47□□□□□ -0.41
PNKP-228ENST00000637325 MANSC1Q9H8J5 431 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms