RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 SLC27A6Q9Y2P4 619 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 RNF115Q9Y4L5 304 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 POLR3HQ9Y535 204 aaPredicted RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 YIPF1Q9Y548 306 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 WNT6Q9Y6F9 365 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 ARHGEF40Q8TER5 1519 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 NUP160Q12769 1436 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 ERBINQ96RT1 1412 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 IBTKQ9P2D0 1353 aaPredicted RBP2.76□□□□□ -1.97
VIM-210ENST00000637053 HEG1Q9ULI3 1381 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 SPATA31A6Q5VVP1 1343 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 TRBV7-9A0A0J9YWB2 115 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 PVALEFA0A1B0GWK0 134 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 A0A1W2PS29 197 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 TCRBV7S2A1N4TA0A589 114 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 FEZF1A0PJY2 475 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 KRTAP23-1A1A580 65 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 C1orf226A1L170 272 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 RNF222A6NCQ9 220 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 ZNF840PA6NDX5 716 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 E9PLN8 166 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 ACOX3O15254 700 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 SURF4O15260 269 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 CFLARO15519 480 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 LDB2O43679 373 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 HUS1O60921 280 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 N4BP1O75113 896 aaKnown RBP2.76□□□□□ -1.97
VIM-210ENST00000637053 BCAR3O75815 825 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 ZMPSTE24O75844 475 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 OR2J3O76001 311 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 SCGNO76038 276 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 SRP72O76094 671 aaKnown RBP2.76□□□□□ -1.97
VIM-210ENST00000637053 CLDN7O95471 211 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 SYNGR4O95473 234 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 ETHE1O95571 254 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 NFATC1O95644 943 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 KRT75O95678 551 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 TXNDC12O95881 172 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 PEX11BO96011 259 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 SERPINA1P01009 418 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 C9P02748 559 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 TCRBP04435 133 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 SERPINB2P05120 415 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 DCNP07585 359 aaKnown RBP2.76□□□□□ -1.97
VIM-210ENST00000637053 NBEAP1P0C6P0 100 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 DANCRP0C864 163 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 PET100P0DJ07 73 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 CETPP11597 493 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 ADRB3P13945 408 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 CYP11B1P15538 503 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 NPR2P20594 1047 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 BGNP21810 368 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 GCSHP23434 173 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 APEX1P27695 318 aaKnown RBP2.76□□□□□ -1.97
VIM-210ENST00000637053 RBMS1P29558 406 aaKnown RBP2.76□□□□□ -1.97
VIM-210ENST00000637053 SSTR1P30872 391 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 CALCRP30988 508 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 CRHR1P34998 444 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 SERPINB5P36952 375 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 GRIA3P42263 894 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 OR3A1P47881 315 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 HCAR3P49019 387 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 DUSP3P51452 185 aaPredicted RBP2.76□□□□□ -1.97
VIM-210ENST00000637053 LIMK2P53671 638 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 HMGCS2P54868 508 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 RRADP55042 308 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 LILRA4P59901 499 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 PLP1P60201 277 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 ZP1P60852 638 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 RBX1P62877 108 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 DLK1P80370 383 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 SSBP2P81877 361 aaPredicted RBP2.76□□□□□ -1.97
VIM-210ENST00000637053 TIAL1Q01085 375 aaKnown RBP eCLIP2.76□□□□□ -1.97
VIM-210ENST00000637053 E2F1Q01094 437 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 DHODHQ02127 395 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 RAD51Q06609 339 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 CKAP4Q07065 602 aaKnown RBP2.76□□□□□ -1.97
VIM-210ENST00000637053 SEMA3BQ13214 749 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 IL18R1Q13478 541 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 CRMP1Q14194 572 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 LRRC36Q1X8D7 754 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 CTU2Q2VPK5 515 aaKnown RBP2.76□□□□□ -1.97
VIM-210ENST00000637053 DCAF4L1Q3SXM0 396 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 SLC36A2Q495M3 483 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 PDSS1Q5T2R2 415 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 OR2G6Q5TZ20 316 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 MARC1Q5VT66 337 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 FAM69BQ5VUD6 431 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 AGAP6Q5VW22 663 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 LIPKQ5VXJ0 399 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 CYB5R2Q6BCY4 276 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 ZFP1Q6P2D0 407 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 UQCC3Q6UW78 93 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 CD164L2Q6UWJ8 174 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 PLXDC2Q6UX71 529 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 C17orf107Q6ZR85 190 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 ASB18Q6ZVZ8 466 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 USP43Q70EL4 1123 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 MOB2Q70IA6 237 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 FCRLAQ7L513 359 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms