RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 GHRHP01286 108 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 BCHEP06276 602 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 DBIP07108 87 aaKnown RBP6.17□□□□□ -1.42
UPF3B-205ENST00000636792 C8BP07358 591 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 OR12D1P0DN82 309 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 NR2F1P10589 423 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 ETFAP13804 333 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 TBXA2RP21731 343 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 ITPKBP27987 946 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 SOX3P41225 446 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 CPA2P48052 419 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 GZMMP51124 257 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 ATP12AP54707 1039 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 POLE2P56282 527 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 CORO7P57737 925 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 COL9A2Q14055 689 aaPredicted RBP6.17□□□□□ -1.42
UPF3B-205ENST00000636792 SCARB2Q14108 478 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 CAPRIN1Q14444 709 aaKnown RBP6.17□□□□□ -1.42
UPF3B-205ENST00000636792 GANABQ14697 944 aaKnown RBP6.17□□□□□ -1.42
UPF3B-205ENST00000636792 LARS2Q15031 903 aaKnown RBP6.17□□□□□ -1.42
UPF3B-205ENST00000636792 ZNF141Q15928 474 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 TBR1Q16650 682 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 FLYWCH1Q4VC44 716 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 LIN52Q52LA3 116 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 GPAT3Q53EU6 434 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 RABL3Q5HYI8 236 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 SLC30A6Q6NXT4 461 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.17□□□□□ -1.42
UPF3B-205ENST00000636792 PTOV1Q86YD1 416 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 GRAMD2AQ8IUY3 354 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 PEX5LQ8IYB4 626 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 ZNF440Q8IYI8 595 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 MICU2Q8IYU8 434 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 BEST3Q8N1M1 668 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 BCORP1Q8N888 145 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 POGLUT1Q8NBL1 392 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 MDS2Q8NDY4 140 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 FDCSPQ8NFU4 85 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 OR5D16Q8NGK9 328 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 OR10A6Q8NH74 314 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 C9orf43Q8TAL5 461 aaPredicted RBP6.17□□□□□ -1.42
UPF3B-205ENST00000636792 SPPL2AQ8TCT8 520 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 XAGE5Q8WWM1 108 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 CDS1Q92903 461 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 HGDQ93099 445 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 TMBIM1Q969X1 311 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 MCUR1Q96AQ8 359 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 RMND5BQ96G75 393 aaPredicted RBP6.17□□□□□ -1.42
UPF3B-205ENST00000636792 TMEM19Q96HH6 336 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 ZNF583Q96ND8 569 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 FRMD6Q96NE9 622 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 KCTD14Q9BQ13 255 aaPredicted RBP6.17□□□□□ -1.42
UPF3B-205ENST00000636792 MESP1Q9BRJ9 268 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 TRIM15Q9C019 465 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 SLC38A1Q9H2H9 487 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 IKZF5Q9H5V7 419 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 CDCP1Q9H5V8 836 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 GORASP2Q9H8Y8 452 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 MTHFD2LQ9H903 347 aaPredicted RBP6.17□□□□□ -1.42
UPF3B-205ENST00000636792 IL1RL2Q9HB29 575 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 SH2D2AQ9NP31 389 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 EXOSC3Q9NQT5 275 aaKnown RBP6.17□□□□□ -1.42
UPF3B-205ENST00000636792 SACM1LQ9NTJ5 587 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 QPCTLQ9NXS2 382 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 STMN3Q9NZ72 180 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 ADA2Q9NZK5 511 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 CD300AQ9UGN4 299 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 SLC35A3Q9Y2D2 325 aa6.17□□□□□ -1.42
UPF3B-205ENST00000636792 CHCHD2Q9Y6H1 151 aaPredicted RBP6.17□□□□□ -1.42
UPF3B-205ENST00000636792 IGLV3-32A0A0A0MS00 114 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 MYOCOSA0A1B0GUC4 107 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 PRAMEF25A6NGN4 478 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 AGAP5A6NIR3 686 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 A8MUI8 341 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 WWP2O00308 870 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 SYT5O00445 386 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 FAAHO00519 579 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 RRP9O43818 475 aaKnown RBP6.16□□□□□ -1.42
UPF3B-205ENST00000636792 SLC28A2O43868 658 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 NME2P1O60361 137 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 EIF4E2O60573 245 aaKnown RBP6.16□□□□□ -1.42
UPF3B-205ENST00000636792 SLC25A12O75746 678 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 PGM3O95394 542 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 H6PDO95479 791 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 OXSR1O95747 527 aaPredicted RBP6.16□□□□□ -1.42
UPF3B-205ENST00000636792 P04436 131 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 UQCRBP14927 111 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 HPGDP15428 266 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 NME2P22392 152 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 ME2P23368 584 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 GRNP28799 593 aaKnown RBP6.16□□□□□ -1.42
UPF3B-205ENST00000636792 PRKAR1BP31321 381 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 EVI2BP34910 448 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 PTGER1P34995 402 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 DCTP40126 519 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 GSK3BP49841 420 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 TNFSF10P50591 281 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 CCL11P51671 97 aa6.16□□□□□ -1.42
UPF3B-205ENST00000636792 RPS26P62854 115 aaKnown RBP6.16□□□□□ -1.42
UPF3B-205ENST00000636792 ARG2P78540 354 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms