RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 SPNS3Q6ZMD2 512 aa13.54□□□□□ -0.24
CACNA1A-230ENST00000636768 NATD1Q8N6N6 113 aa13.54□□□□□ -0.24
CACNA1A-230ENST00000636768 OR5P2Q8WZ92 322 aa13.54□□□□□ -0.24
CACNA1A-230ENST00000636768 FIG4Q92562 907 aa13.54□□□□□ -0.24
CACNA1A-230ENST00000636768 PARD6BQ9BYG5 372 aa13.54□□□□□ -0.24
CACNA1A-230ENST00000636768 CENPHQ9H3R5 247 aa13.54□□□□□ -0.24
CACNA1A-230ENST00000636768 UBQLN4Q9NRR5 601 aa13.54□□□□□ -0.24
CACNA1A-230ENST00000636768 STOML1Q9UBI4 398 aa13.54□□□□□ -0.24
CACNA1A-230ENST00000636768 EDARQ9UNE0 448 aa13.54□□□□□ -0.24
CACNA1A-230ENST00000636768 ANKRD17O75179 2603 aaKnown RBP13.54□□□□□ -0.24
CACNA1A-230ENST00000636768 FREM3P0C091 2139 aa13.54□□□□□ -0.24
CACNA1A-230ENST00000636768 MED12Q93074 2177 aa13.54□□□□□ -0.24
CACNA1A-230ENST00000636768 ARHGAP21Q5T5U3 1957 aa13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 KIAA1549Q9HCM3 1950 aa13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 SHISA8B8ZZ34 492 aa13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 CFLARO15519 480 aa13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 TNFRSF21O75509 655 aa13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 TNFSF13O75888 250 aa13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 C6orf47O95873 294 aa13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 SERPINE1P05121 402 aa13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 CRHP06850 196 aa13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 PRPS1L1P21108 318 aa13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 ATP6V1C1P21283 382 aa13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 TBXA2RP21731 343 aa13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 CCT3P49368 545 aaKnown RBP13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 ZNF41P51814 821 aaPredicted RBP13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 CLDN15P56746 228 aa13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 SIRPAP78324 504 aa13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 DAZAP2Q15038 168 aaPredicted RBP13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 PON3Q15166 354 aa13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 CHI3L2Q15782 390 aa13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 PDCD2Q16342 344 aaPredicted RBP13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 SGCBQ16585 318 aa13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 LSM12Q3MHD2 195 aaKnown RBP13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 PPP4R4Q6NUP7 873 aa13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 ZAR1Q86SH2 424 aa13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 CDC20BQ86Y33 519 aa13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 KRTCAP2Q8N6L1 136 aa13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 OR56A1Q8NGH5 318 aa13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 FAM110BQ8TC76 370 aa13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 CDS1Q92903 461 aa13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 SH3YL1Q96HL8 342 aaPredicted RBP13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 PPP1R36Q96LQ0 422 aa13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 STACQ99469 402 aa13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 BTBD2Q9BX70 525 aa13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 NEUROD4Q9HD90 331 aa13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 DUSP22Q9NRW4 184 aa13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 FAF1Q9UNN5 650 aaPredicted RBP13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 ZNF175Q9Y473 711 aa13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 AP4B1Q9Y6B7 739 aa13.53□□□□□ -0.24
CACNA1A-230ENST00000636768 F8P00451 2351 aa13.52□□□□□ -0.24
CACNA1A-230ENST00000636768 A0A087WZY1 265 aa13.52□□□□□ -0.25
CACNA1A-230ENST00000636768 FAM221AA4D161 298 aa13.52□□□□□ -0.25
CACNA1A-230ENST00000636768 MSTNO14793 375 aa13.52□□□□□ -0.25
CACNA1A-230ENST00000636768 ITM2AO43736 263 aa13.52□□□□□ -0.25
CACNA1A-230ENST00000636768 ZNF500O60304 480 aaPredicted RBP13.52□□□□□ -0.25
CACNA1A-230ENST00000636768 KRT16P08779 473 aa13.52□□□□□ -0.25
CACNA1A-230ENST00000636768 G6PDP11413 515 aa13.52□□□□□ -0.25
CACNA1A-230ENST00000636768 FCGR2AP12318 317 aa13.52□□□□□ -0.25
CACNA1A-230ENST00000636768 ZNF17P17021 662 aa13.52□□□□□ -0.25
CACNA1A-230ENST00000636768 SOAT1P35610 550 aa13.52□□□□□ -0.25
CACNA1A-230ENST00000636768 IST1P53990 364 aa13.52□□□□□ -0.25
CACNA1A-230ENST00000636768 CDC73Q6P1J9 531 aa13.52□□□□□ -0.25
CACNA1A-230ENST00000636768 MISPQ8IVT2 679 aa13.52□□□□□ -0.25
CACNA1A-230ENST00000636768 FNDC9Q8TBE3 224 aa13.52□□□□□ -0.25
CACNA1A-230ENST00000636768 ADAMTS15Q8TE58 950 aa13.52□□□□□ -0.25
CACNA1A-230ENST00000636768 NINJ1Q92982 152 aa13.52□□□□□ -0.25
CACNA1A-230ENST00000636768 ZNF845Q96IR2 970 aaPredicted RBP13.52□□□□□ -0.25
CACNA1A-230ENST00000636768 DUSP26Q9BV47 211 aa13.52□□□□□ -0.25
CACNA1A-230ENST00000636768 ACTRT3Q9BYD9 372 aa13.52□□□□□ -0.25
CACNA1A-230ENST00000636768 BHLHE41Q9C0J9 482 aaPredicted RBP13.52□□□□□ -0.25
CACNA1A-230ENST00000636768 LIME1Q9H400 295 aa13.52□□□□□ -0.25
CACNA1A-230ENST00000636768 PIGUQ9H490 435 aa13.52□□□□□ -0.25
CACNA1A-230ENST00000636768 CXorf36Q9H7Y0 433 aa13.52□□□□□ -0.25
CACNA1A-230ENST00000636768 CCM2LQ9NUG4 571 aaPredicted RBP13.52□□□□□ -0.25
CACNA1A-230ENST00000636768 FBXO34Q9NWN3 711 aa13.52□□□□□ -0.25
CACNA1A-230ENST00000636768 GIN1Q9NXP7 522 aa13.52□□□□□ -0.25
CACNA1A-230ENST00000636768 NOP53Q9NZM5 478 aaKnown RBP13.52□□□□□ -0.25
CACNA1A-230ENST00000636768 ST6GALNAC2Q9UJ37 374 aa13.52□□□□□ -0.25
CACNA1A-230ENST00000636768 SPG11Q96JI7 2443 aa13.52□□□□□ -0.25
CACNA1A-230ENST00000636768 TEP1Q99973 2627 aaKnown RBP13.52□□□□□ -0.25
CACNA1A-230ENST00000636768 UQCRHLA0A096LP55 91 aa13.51□□□□□ -0.25
CACNA1A-230ENST00000636768 A0A1W2PQD3 144 aa13.51□□□□□ -0.25
CACNA1A-230ENST00000636768 SH3D21A4FU49 640 aa13.51□□□□□ -0.25
CACNA1A-230ENST00000636768 A8MXE2 369 aa13.51□□□□□ -0.25
CACNA1A-230ENST00000636768 EIF1AYO14602 144 aaKnown RBP13.51□□□□□ -0.25
CACNA1A-230ENST00000636768 TM9SF1O15321 606 aa13.51□□□□□ -0.25
CACNA1A-230ENST00000636768 BIRC5O15392 142 aa13.51□□□□□ -0.25
CACNA1A-230ENST00000636768 DNASE1P24855 282 aa13.51□□□□□ -0.25
CACNA1A-230ENST00000636768 EIF1AXP47813 144 aaKnown RBP13.51□□□□□ -0.25
CACNA1A-230ENST00000636768 ABCE1P61221 599 aaKnown RBP13.51□□□□□ -0.25
CACNA1A-230ENST00000636768 EMX2Q04743 252 aa13.51□□□□□ -0.25
CACNA1A-230ENST00000636768 TMEM44Q2T9K0 475 aa13.51□□□□□ -0.25
CACNA1A-230ENST00000636768 PGS1Q32NB8 556 aa13.51□□□□□ -0.25
CACNA1A-230ENST00000636768 EXOSC6Q5RKV6 272 aaKnown RBP13.51□□□□□ -0.25
CACNA1A-230ENST00000636768 CEP85LQ5SZL2 805 aa13.51□□□□□ -0.25
CACNA1A-230ENST00000636768 VWA1Q6PCB0 445 aa13.51□□□□□ -0.25
CACNA1A-230ENST00000636768 WDR75Q8IWA0 830 aaKnown RBP13.51□□□□□ -0.25
CACNA1A-230ENST00000636768 GTPBP8Q8N3Z3 284 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms