RNA–Protein interactions for RNA: ENST00000630482.2

SOX2-OT-256, SOX2 overlapping transcript, human

TSL 5

Gene SOX2-OT, Length 1,012 nt, Biotype sense overlapping.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX2-OT-256	ENST00000630482	TAS2R7	Q9NYW3	318 aa		10.85	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	CSPG4	Q6UVK1	2322 aa		10.85	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	IGLV3-32	A0A0A0MS00	114 aa		10.84	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	ARHGEF9	O43307	516 aa		10.84	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	AKAP10	O43572	662 aa		10.84	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	SEC22B	O75396	215 aa		10.84	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	SLITRK5	O94991	958 aa		10.84	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	NKX2-2	O95096	273 aa		10.84	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	KCNH1	O95259	989 aa		10.84	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	SHBG	P04278	402 aa		10.84	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	SDC1	P18827	310 aa		10.84	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	TBXA2R	P21731	343 aa		10.84	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	PCSK6	P29122	969 aa		10.84	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	GPC1	P35052	558 aa		10.84	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	MAP3K8	P41279	467 aa		10.84	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	PCYT1A	P49585	367 aa		10.84	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	PRKAG1	P54619	331 aa		10.84	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	EEFSEC	P57772	596 aa	Known RBP	10.84	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	PRR5	P85299	388 aa		10.84	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	C17orf67	Q0P5P2	114 aa		10.84	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	CCNJ	Q5T5M9	372 aa		10.84	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	WDR93	Q6P2C0	686 aa		10.84	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	SH2D5	Q6ZV89	423 aa		10.84	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	IKBIP	Q70UQ0	350 aa		10.84	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	FAM214B	Q7L5A3	538 aa		10.84	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	PRIMA1	Q86XR5	153 aa		10.84	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	OR4C3	Q8NH37	302 aa		10.84	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	OR10D3	Q8NH80	312 aa		10.84	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	HOXB13	Q92826	284 aa	Predicted RBP	10.84	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	PIGT	Q969N2	578 aa		10.84	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	SH3YL1	Q96HL8	342 aa	Predicted RBP	10.84	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	ADGRG7	Q96K78	797 aa		10.84	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	RNF145	Q96MT1	663 aa		10.84	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	TSSK3	Q96PN8	268 aa		10.84	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	PARD6B	Q9BYG5	372 aa		10.84	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	ANKZF1	Q9H8Y5	726 aa		10.84	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	DCDC2	Q9UHG0	476 aa		10.84	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	AP4B1	Q9Y6B7	739 aa		10.84	□□□□□ -0.67
SOX2-OT-256	ENST00000630482	NPIPA5	A0A0B4J1W7	369 aa		10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	SMIM23	A6NLE4	172 aa		10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	NPIPA7	E9PJI5	369 aa		10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	TNFSF11	O14788	317 aa		10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	KLF4	O43474	513 aa		10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	CXCL13	O43927	109 aa		10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	PLIN3	O60664	434 aa		10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	NPIPA8	P0DM63	369 aa		10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	PRPS2	P11908	318 aa		10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	IL11	P20809	199 aa		10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	PSMA4	P25789	261 aa	Known RBP	10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	SHC1	P29353	583 aa		10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	PTH2R	P49190	550 aa		10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	CLK3	P49761	638 aa	Known RBP	10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	PSMD4	P55036	377 aa	Known RBP	10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	RPL38	P63173	70 aa	Known RBP	10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	SLC18A2	Q05940	514 aa		10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	DUSP5	Q16690	384 aa		10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	PLPPR5	Q32ZL2	321 aa		10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	WFDC8	Q8IUA0	241 aa		10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	SLC16A11	Q8NCK7	471 aa		10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	NUP43	Q8NFH3	380 aa		10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	OR6K3	Q8NGY3	331 aa		10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	FAM76A	Q8TAV0	307 aa		10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	POC1B	Q8TC44	478 aa		10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	UBLCP1	Q8WVY7	318 aa	Predicted RBP	10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	CCDC126	Q96EE4	140 aa		10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	C16orf58	Q96GQ5	468 aa		10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	SLC39A3	Q9BRY0	314 aa		10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	PRRG4	Q9BZD6	226 aa		10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	TUBB1	Q9H4B7	451 aa		10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	C12orf49	Q9H741	205 aa		10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	C3orf14	Q9HBI5	128 aa		10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	LRTM1	Q9HBL6	345 aa		10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	GIMAP2	Q9UG22	337 aa		10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	BAIAP2L1	Q9UHR4	511 aa		10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	MRTO4	Q9UKD2	239 aa	Known RBP	10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	ABCA1	O95477	2261 aa		10.83	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	CUBN	O60494	3623 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	UQCRHL	A0A096LP55	91 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482		A0A0J9YW62	118 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482		A0A1W2PRB8	838 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	TMEM233	B4DJY2	109 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	ALG1L2	C9J202	215 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	NPIPB8	E9PQR5	432 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	LINC01387	J3KSC0	135 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	OIP5	O43482	229 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	NDUFB5	O43674	189 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	SS18L1	O75177	396 aa	Predicted RBP	10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	KCNK2	O95069	426 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	NTN1	O95631	604 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	PLG	P00747	810 aa	Predicted RBP	10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	UROS	P10746	265 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	FCGR2A	P12318	317 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	NID1	P14543	1247 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	ZNF17	P17021	662 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	FPR1	P21462	350 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	PRPH2	P23942	346 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	VSNL1	P62760	191 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	ZNF844	Q08AG5	666 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	PCLAF	Q15004	111 aa		10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms