RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 CDK6Q00534 326 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 NRG1Q02297 640 aaPredicted RBP1.8□□□□□ -2.12
TCF4-264ENST00000628391 MXD1Q05195 221 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 EGR3Q06889 387 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 SIGLEC14Q08ET2 396 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 RBBP4Q09028 425 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 ST3GAL4Q11206 333 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 TMEM115Q12893 351 aaPredicted RBP1.8□□□□□ -2.12
TCF4-264ENST00000628391 TSPAN31Q12999 210 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 DUSP8Q13202 625 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 SRSF5Q13243 272 aaKnown RBP1.8□□□□□ -2.12
TCF4-264ENST00000628391 ITPK1Q13572 414 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 PWP1Q13610 501 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 KIAA0141Q14154 515 aaPredicted RBP1.8□□□□□ -2.12
TCF4-264ENST00000628391 SLBPQ14493 270 aaKnown RBP eCLIP1.8□□□□□ -2.12
TCF4-264ENST00000628391 SLC10A1Q14973 349 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 RPS6KA2Q15349 733 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 RHEBQ15382 184 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 SPHARQ15513 63 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 CCDC85BQ15834 202 aaPredicted RBP1.8□□□□□ -2.12
TCF4-264ENST00000628391 KCNA10Q16322 511 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 NKG7Q16617 165 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 SLC5A12Q1EHB4 618 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 FAM83EQ2M2I3 478 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 VMACQ2NL98 169 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 GOLGA7BQ2TAP0 167 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 EML3Q32P44 896 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 SPDYE2Q495Y8 402 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 SCGB2B2Q4G0G5 96 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 ATP6AP1LQ52LC2 224 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 ASPRV1Q53RT3 343 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 ZRANB3Q5FWF4 1079 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 ARSJQ5FYB0 599 aaPredicted RBP1.8□□□□□ -2.12
TCF4-264ENST00000628391 XKR7Q5GH72 579 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 TECRLQ5HYJ1 363 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 PAGE3Q5JUK9 113 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 ELFN2Q5R3F8 820 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 TMEM201Q5SNT2 666 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 AKR1C8PQ5T2L2 129 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 SFRP5Q5T4F7 317 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 ZNF648Q5T619 568 aaPredicted RBP1.8□□□□□ -2.12
TCF4-264ENST00000628391 IDNKQ5T6J7 187 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 TMEM244Q5VVB8 128 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 BSPRYQ5W0U4 402 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 SLC22A10Q63ZE4 541 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 ZNF626Q68DY1 528 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 LEMD1Q68G75 181 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 ANKRD34AQ69YU3 496 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 HBMQ6B0K9 141 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 PLAG1Q6DJT9 500 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 TXNRD3NBQ6F5E7 133 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 EIF5AL1Q6IS14 154 aaKnown RBP1.8□□□□□ -2.12
TCF4-264ENST00000628391 CXorf57Q6NSI4 855 aaKnown RBP1.8□□□□□ -2.12
TCF4-264ENST00000628391 APOBEC3HQ6NTF7 200 aaKnown RBP1.8□□□□□ -2.12
TCF4-264ENST00000628391 ACSM5Q6NUN0 579 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 CDPF1Q6NVV7 123 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 SLC30A6Q6NXT4 461 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 JMJD6Q6NYC1 403 aaPredicted RBP1.8□□□□□ -2.12
TCF4-264ENST00000628391 FAHD2BQ6P2I3 314 aaPredicted RBP1.8□□□□□ -2.12
TCF4-264ENST00000628391 ZNF549Q6P9A3 640 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 VWA1Q6PCB0 445 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 ZNF790Q6PG37 636 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 FIGNL1Q6PIW4 674 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 PRSS57Q6UWY2 283 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 NPNTQ6UXI9 565 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 DLK2Q6UY11 383 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 GLDNQ6ZMI3 551 aaPredicted RBP1.8□□□□□ -2.12
TCF4-264ENST00000628391 CYHR1Q6ZMK1 362 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 MEX3BQ6ZN04 569 aaKnown RBP1.8□□□□□ -2.12
TCF4-264ENST00000628391 DEF8Q6ZN54 512 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 TMEM91Q6ZNR0 172 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 RNF165Q6ZSG1 346 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 HIST2H3AQ71DI3 136 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 LINGO2Q7L985 606 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 PRICKLE2Q7Z3G6 844 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 GALNTL5Q7Z4T8 443 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 WDR53Q7Z5U6 358 aaPredicted RBP1.8□□□□□ -2.12
TCF4-264ENST00000628391 TECPR1Q7Z6L1 1165 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 PXKQ7Z7A4 578 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 LHFPL4Q7Z7J7 247 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 TMEM179BQ7Z7N9 219 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 LDB1Q86U70 411 aaPredicted RBP1.8□□□□□ -2.12
TCF4-264ENST00000628391 PDZD3Q86UT5 571 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 CD163Q86VB7 1156 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 KCNMB4Q86W47 210 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 UNC93AQ86WB7 457 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 VRK2Q86Y07 508 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 THNSL2Q86YJ6 484 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 CBWD2Q8IUF1 395 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 CILP2Q8IUL8 1156 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 MFSD6LQ8IWD5 586 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 CNTN4Q8IWV2 1026 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 NPAS3Q8IXF0 933 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 FAM126BQ8IXS8 530 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 PHACTR4Q8IZ21 702 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 KIR2DL5AQ8N109 375 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 OR6V1Q8N148 313 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 CPXM2Q8N436 756 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 TOMM5Q8N4H5 51 aa1.8□□□□□ -2.12
TCF4-264ENST00000628391 TMEM151AQ8N4L1 468 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms