RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 FBXO45P0C2W1 286 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 HTR2AP28223 471 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 RGRP47804 291 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 CSNK2A1P68400 391 aaPredicted RBP12.06□□□□□ -0.48
SCN8A-209ENST00000627620 TMEM184AQ6ZMB5 413 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 MEX3DQ86XN8 651 aaKnown RBP12.06□□□□□ -0.48
SCN8A-209ENST00000627620 CSNK2A3Q8NEV1 391 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 CHPT1Q8WUD6 406 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 CDC6Q99741 560 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 GPN2Q9H9Y4 310 aaPredicted RBP12.06□□□□□ -0.48
SCN8A-209ENST00000627620 OR6C2Q9NZP2 312 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.06□□□□□ -0.48
SCN8A-209ENST00000627620 H7C2Y5 167 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 ANKRD28O15084 1053 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 RAC2P15153 192 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 PPP5CP53041 499 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 OR7A5Q15622 319 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 PIP5KL1Q5T9C9 394 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 SLC22A10Q63ZE4 541 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 SYT3Q9BQG1 590 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 TMEM246Q9BRR3 403 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 RGCCQ9H4X1 137 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 B3GNT3Q9Y2A9 372 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 PIGBOS1A0A0B4J2F0 54 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 DCDC2BA2VCK2 349 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 OR2T1O43869 369 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 GJB3O75712 270 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 CRTAPO75718 401 aaPredicted RBP12.06□□□□□ -0.48
SCN8A-209ENST00000627620 C1orf105O95561 183 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 HOXC13P31276 330 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 SGSHP51688 502 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 HOXC5Q00444 222 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 CTBSQ01459 385 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 LYSMD4Q5XG99 296 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 ZNF704Q6ZNC4 412 aaPredicted RBP12.06□□□□□ -0.48
SCN8A-209ENST00000627620 ARRDC2Q8TBH0 407 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 ZNF480Q8WV37 535 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 C16orf58Q96GQ5 468 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 CCNL2Q96S94 520 aaPredicted RBP12.06□□□□□ -0.48
SCN8A-209ENST00000627620 ZNF334Q9HCZ1 680 aaPredicted RBP12.06□□□□□ -0.48
SCN8A-209ENST00000627620 SRPK3Q9UPE1 567 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 HMX3A6NHT5 357 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 SULT2B1O00204 365 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 YY2O15391 372 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 TUBB3Q13509 450 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 GK3PQ14409 553 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 EXOSC7Q15024 291 aaKnown RBP12.06□□□□□ -0.48
SCN8A-209ENST00000627620 SLC14A2Q15849 920 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 CTSL3PQ5NE16 218 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 SLC29A1Q99808 456 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 THSD1Q9NS62 852 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 CXXC1Q9P0U4 656 aaPredicted RBP12.06□□□□□ -0.48
SCN8A-209ENST00000627620 CPNE7Q9UBL6 633 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 ACAD8Q9UKU7 415 aa12.06□□□□□ -0.48
SCN8A-209ENST00000627620 A6NL46 340 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 CD79AP11912 226 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 DRD5P21918 477 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 PSMB5P28074 263 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 PRLHRP49683 370 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 WDR53Q7Z5U6 358 aaPredicted RBP12.05□□□□□ -0.48
SCN8A-209ENST00000627620 PXKQ7Z7A4 578 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 FNDC8Q8TC99 324 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 MS4A4AQ96JQ5 239 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 PRRC1Q96M27 445 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 MAP3K3Q99759 626 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 SYT11Q9BT88 431 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 KLHL42Q9P2K6 505 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 SLC35A3Q9Y2D2 325 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 TRIM64BA6NI03 449 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 ARNTLO00327 626 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 IFNA1P01562 189 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 PVRP15151 417 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 CHMP24386 653 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 AOAHP28039 575 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 PRSS3P35030 304 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 GLO1Q04760 184 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 RBM39Q14498 530 aaKnown RBP12.05□□□□□ -0.48
SCN8A-209ENST00000627620 ARL6IP1Q15041 203 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 PHOSPHO2Q8TCD6 241 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 HCSTQ9UBK5 93 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 GPR45Q9Y5Y3 372 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 ATG12O94817 140 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 HLA-FP30511 346 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 NUDT1P36639 197 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 CXCL12P48061 93 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 ZNF616Q08AN1 781 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 MELKQ14680 651 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 NKPD1Q17RQ9 610 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 RABEPKQ7Z6M1 372 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 GPR148Q8TDV2 347 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 C3orf30Q96M34 536 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 TSNAXQ99598 290 aaKnown RBP12.05□□□□□ -0.48
SCN8A-209ENST00000627620 EMCNQ9ULC0 261 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 AK6Q9Y3D8 172 aaKnown RBP12.05□□□□□ -0.48
SCN8A-209ENST00000627620 TIMM8BQ9Y5J9 83 aaPredicted RBP12.05□□□□□ -0.48
SCN8A-209ENST00000627620 ADAM12O43184 909 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 NPR2P20594 1047 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 TRA2BP62995 288 aaKnown RBP12.05□□□□□ -0.48
SCN8A-209ENST00000627620 ERVK-25P63136 954 aa12.05□□□□□ -0.48
SCN8A-209ENST00000627620 TAP2Q03519 686 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms