RNA–Protein interactions for RNA: ENST00000623163.3

SNHG5-215, Transcript of small nucleolar RNA host gene 5, human

TSL 5

Gene SNHG5, Length 851 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG5-215	ENST00000623163	TMEM216	Q9P0N5	145 aa		12.84	□□□□□ -0.35
SNHG5-215	ENST00000623163	SENP1	Q9P0U3	644 aa		12.84	□□□□□ -0.35
SNHG5-215	ENST00000623163	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	12.84	□□□□□ -0.35	8e-8	■■■■■ 50.6
SNHG5-215	ENST00000623163	GCM2	O75603	506 aa	Predicted RBP	12.83	□□□□□ -0.36
SNHG5-215	ENST00000623163	NKX2-2	O95096	273 aa		12.83	□□□□□ -0.36
SNHG5-215	ENST00000623163	TAC1	P20366	129 aa		12.83	□□□□□ -0.36
SNHG5-215	ENST00000623163	ATP5F1	P24539	256 aa	Predicted RBP	12.83	□□□□□ -0.36
SNHG5-215	ENST00000623163	ECHS1	P30084	290 aa		12.83	□□□□□ -0.36
SNHG5-215	ENST00000623163	HMOX2	P30519	316 aa		12.83	□□□□□ -0.36
SNHG5-215	ENST00000623163	LCN1	P31025	176 aa		12.83	□□□□□ -0.36
SNHG5-215	ENST00000623163	EIF1AX	P47813	144 aa	Known RBP	12.83	□□□□□ -0.36
SNHG5-215	ENST00000623163	C2orf80	Q0P641	193 aa		12.83	□□□□□ -0.36
SNHG5-215	ENST00000623163	EXOC3L2	Q2M3D2	409 aa		12.83	□□□□□ -0.36
SNHG5-215	ENST00000623163	GRAMD1B	Q3KR37	738 aa		12.83	□□□□□ -0.36
SNHG5-215	ENST00000623163	SH2D4B	Q5SQS7	431 aa		12.83	□□□□□ -0.36
SNHG5-215	ENST00000623163	SEZ6L2	Q6UXD5	910 aa		12.83	□□□□□ -0.36
SNHG5-215	ENST00000623163	ESPNL	Q6ZVH7	1005 aa		12.83	□□□□□ -0.36
SNHG5-215	ENST00000623163	IKBIP	Q70UQ0	350 aa		12.83	□□□□□ -0.36
SNHG5-215	ENST00000623163	WDR75	Q8IWA0	830 aa	Known RBP	12.83	□□□□□ -0.36
SNHG5-215	ENST00000623163	GABRG1	Q8N1C3	465 aa		12.83	□□□□□ -0.36
SNHG5-215	ENST00000623163	LRRN4CL	Q8ND94	238 aa		12.83	□□□□□ -0.36
SNHG5-215	ENST00000623163	OR4C3	Q8NH37	302 aa		12.83	□□□□□ -0.36
SNHG5-215	ENST00000623163	AKAP1	Q92667	903 aa	Known RBP eCLIP	12.83	□□□□□ -0.36
SNHG5-215	ENST00000623163	ZBTB8A	Q96BR9	441 aa		12.83	□□□□□ -0.36
SNHG5-215	ENST00000623163	HDHD5	Q9BXW7	423 aa		12.83	□□□□□ -0.36
SNHG5-215	ENST00000623163	EBPL	Q9BY08	206 aa		12.83	□□□□□ -0.36
SNHG5-215	ENST00000623163	GRIP2	Q9C0E4	1043 aa		12.83	□□□□□ -0.36
SNHG5-215	ENST00000623163	C3orf14	Q9HBI5	128 aa		12.83	□□□□□ -0.36
SNHG5-215	ENST00000623163	MCTS1	Q9ULC4	181 aa	Known RBP	12.83	□□□□□ -0.36
SNHG5-215	ENST00000623163	CCL27	Q9Y4X3	112 aa		12.83	□□□□□ -0.36
SNHG5-215	ENST00000623163	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		12.82	□□□□□ -0.36
SNHG5-215	ENST00000623163		A0A0J9YW62	118 aa		12.82	□□□□□ -0.36
SNHG5-215	ENST00000623163	GXYLT2	A0PJZ3	443 aa		12.82	□□□□□ -0.36
SNHG5-215	ENST00000623163	CCDC151	A5D8V7	595 aa		12.82	□□□□□ -0.36
SNHG5-215	ENST00000623163	SHISA8	B8ZZ34	492 aa		12.82	□□□□□ -0.36
SNHG5-215	ENST00000623163	UBFD1	O14562	309 aa	Known RBP	12.82	□□□□□ -0.36
SNHG5-215	ENST00000623163	EIF1AY	O14602	144 aa	Known RBP	12.82	□□□□□ -0.36
SNHG5-215	ENST00000623163	GCA	P28676	217 aa		12.82	□□□□□ -0.36
SNHG5-215	ENST00000623163	AGTR1	P30556	359 aa		12.82	□□□□□ -0.36
SNHG5-215	ENST00000623163	CASQ1	P31415	396 aa		12.82	□□□□□ -0.36
SNHG5-215	ENST00000623163	GABRA3	P34903	492 aa		12.82	□□□□□ -0.36
SNHG5-215	ENST00000623163	CTBP2	P56545	445 aa		12.82	□□□□□ -0.36
SNHG5-215	ENST00000623163	RPS4X	P62701	263 aa	Known RBP	12.82	□□□□□ -0.36
SNHG5-215	ENST00000623163	SLC29A2	Q14542	456 aa		12.82	□□□□□ -0.36
SNHG5-215	ENST00000623163	KIAA0040	Q15053	153 aa		12.82	□□□□□ -0.36
SNHG5-215	ENST00000623163	ZNHIT3	Q15649	155 aa	Predicted RBP	12.82	□□□□□ -0.36
SNHG5-215	ENST00000623163	PLPPR5	Q32ZL2	321 aa		12.82	□□□□□ -0.36
SNHG5-215	ENST00000623163	NCMAP	Q5T1S8	102 aa		12.82	□□□□□ -0.36
SNHG5-215	ENST00000623163	CPTP	Q5TA50	214 aa		12.82	□□□□□ -0.36
SNHG5-215	ENST00000623163	LGSN	Q5TDP6	509 aa		12.82	□□□□□ -0.36
SNHG5-215	ENST00000623163	MFSD12	Q6NUT3	480 aa		12.82	□□□□□ -0.36
SNHG5-215	ENST00000623163	GALNT10	Q86SR1	603 aa		12.82	□□□□□ -0.36
SNHG5-215	ENST00000623163	SLC22A9	Q8IVM8	553 aa		12.82	□□□□□ -0.36
SNHG5-215	ENST00000623163	STEAP2	Q8NFT2	490 aa		12.82	□□□□□ -0.36
SNHG5-215	ENST00000623163	GIMAP5	Q96F15	307 aa		12.82	□□□□□ -0.36
SNHG5-215	ENST00000623163	TBL1XR1	Q9BZK7	514 aa		12.82	□□□□□ -0.36
SNHG5-215	ENST00000623163	GSTO2	Q9H4Y5	243 aa		12.82	□□□□□ -0.36
SNHG5-215	ENST00000623163	GP6	Q9HCN6	339 aa		12.82	□□□□□ -0.36
SNHG5-215	ENST00000623163	DDX18	Q9NVP1	670 aa	Known RBP	12.82	□□□□□ -0.36
SNHG5-215	ENST00000623163	TIMM22	Q9Y584	194 aa		12.82	□□□□□ -0.36
SNHG5-215	ENST00000623163	ANK2	Q01484	3957 aa		12.81	□□□□□ -0.36
SNHG5-215	ENST00000623163		A0A1W2PRB8	838 aa		12.81	□□□□□ -0.36
SNHG5-215	ENST00000623163	TLX2	O43763	284 aa	Predicted RBP	12.81	□□□□□ -0.36
SNHG5-215	ENST00000623163	TBX19	O60806	448 aa		12.81	□□□□□ -0.36
SNHG5-215	ENST00000623163	KCNH1	O95259	989 aa		12.81	□□□□□ -0.36
SNHG5-215	ENST00000623163	OXSR1	O95747	527 aa	Predicted RBP	12.81	□□□□□ -0.36
SNHG5-215	ENST00000623163	SOD3	P08294	240 aa		12.81	□□□□□ -0.36
SNHG5-215	ENST00000623163	PRPH2	P23942	346 aa		12.81	□□□□□ -0.36
SNHG5-215	ENST00000623163	FRK	P42685	505 aa	Predicted RBP	12.81	□□□□□ -0.36
SNHG5-215	ENST00000623163	FOXA1	P55317	472 aa		12.81	□□□□□ -0.36
SNHG5-215	ENST00000623163	DMTN	Q08495	405 aa		12.81	□□□□□ -0.36
SNHG5-215	ENST00000623163	CLEC12B	Q2HXU8	276 aa		12.81	□□□□□ -0.36
SNHG5-215	ENST00000623163	GTF2IRD2B	Q6EKJ0	949 aa		12.81	□□□□□ -0.36
SNHG5-215	ENST00000623163	C8orf74	Q6P047	294 aa		12.81	□□□□□ -0.36
SNHG5-215	ENST00000623163	GTF2IRD2	Q86UP8	949 aa		12.81	□□□□□ -0.36
SNHG5-215	ENST00000623163	STK32C	Q86UX6	486 aa		12.81	□□□□□ -0.36
SNHG5-215	ENST00000623163	TRABD2A	Q86V40	505 aa		12.81	□□□□□ -0.36
SNHG5-215	ENST00000623163	HIPK1	Q86Z02	1210 aa		12.81	□□□□□ -0.36
SNHG5-215	ENST00000623163	OR2V1	Q8NHB1	315 aa		12.81	□□□□□ -0.36
SNHG5-215	ENST00000623163	RAB3IL1	Q8TBN0	382 aa		12.81	□□□□□ -0.36
SNHG5-215	ENST00000623163	POC1B	Q8TC44	478 aa		12.81	□□□□□ -0.36
SNHG5-215	ENST00000623163	RNF128	Q8TEB7	428 aa		12.81	□□□□□ -0.36
SNHG5-215	ENST00000623163	KCNA7	Q96RP8	456 aa		12.81	□□□□□ -0.36
SNHG5-215	ENST00000623163	USB1	Q9BQ65	265 aa	Known RBP	12.81	□□□□□ -0.36
SNHG5-215	ENST00000623163	REG4	Q9BYZ8	158 aa		12.81	□□□□□ -0.36
SNHG5-215	ENST00000623163	PRRG4	Q9BZD6	226 aa		12.81	□□□□□ -0.36
SNHG5-215	ENST00000623163	LRTM1	Q9HBL6	345 aa		12.81	□□□□□ -0.36
SNHG5-215	ENST00000623163	MIEF1	Q9NQG6	463 aa		12.81	□□□□□ -0.36
SNHG5-215	ENST00000623163	MED17	Q9NVC6	651 aa		12.81	□□□□□ -0.36
SNHG5-215	ENST00000623163	CLEC4A	Q9UMR7	237 aa		12.81	□□□□□ -0.36
SNHG5-215	ENST00000623163	LAMP3	Q9UQV4	416 aa		12.81	□□□□□ -0.36
SNHG5-215	ENST00000623163	VDAC3	Q9Y277	283 aa		12.81	□□□□□ -0.36
SNHG5-215	ENST00000623163		A0A1W2PQD3	144 aa		12.8	□□□□□ -0.36
SNHG5-215	ENST00000623163	POC1B-GALNT4	F8VUJ3	575 aa		12.8	□□□□□ -0.36
SNHG5-215	ENST00000623163		H3BQF6	201 aa		12.8	□□□□□ -0.36
SNHG5-215	ENST00000623163	CXCL13	O43927	109 aa		12.8	□□□□□ -0.36
SNHG5-215	ENST00000623163	RSL1D1	O76021	490 aa	Known RBP	12.8	□□□□□ -0.36
SNHG5-215	ENST00000623163	PLG	P00747	810 aa	Predicted RBP	12.8	□□□□□ -0.36
SNHG5-215	ENST00000623163	TUBB	P07437	444 aa		12.8	□□□□□ -0.36
SNHG5-215	ENST00000623163	LINGO3	P0C6S8	592 aa		12.8	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms