RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 KCTD7Q96MP8 289 aa11.13□□□□□ -0.63
TP53-227ENST00000622645 DCLRE1CQ96SD1 692 aaKnown RBP11.13□□□□□ -0.63
TP53-227ENST00000622645 CCDC32Q9BV29 185 aa11.13□□□□□ -0.63
TP53-227ENST00000622645 DPH1Q9BZG8 443 aa11.13□□□□□ -0.63
TP53-227ENST00000622645 TWSG1Q9GZX9 223 aa11.13□□□□□ -0.63
TP53-227ENST00000622645 ENKD1Q9H0I2 346 aa11.13□□□□□ -0.63
TP53-227ENST00000622645 ATP13A2Q9NQ11 1180 aa11.13□□□□□ -0.63
TP53-227ENST00000622645 TIGARQ9NQ88 270 aa11.13□□□□□ -0.63
TP53-227ENST00000622645 HINT3Q9NQE9 182 aaKnown RBP11.13□□□□□ -0.63
TP53-227ENST00000622645 PLEKHB1Q9UF11 243 aaPredicted RBP11.13□□□□□ -0.63
TP53-227ENST00000622645 MSRAQ9UJ68 235 aa11.13□□□□□ -0.63
TP53-227ENST00000622645 EXOSC1Q9Y3B2 195 aaKnown RBP11.13□□□□□ -0.63
TP53-227ENST00000622645 LINC00854A0A1B0GVQ3 168 aa11.13□□□□□ -0.63
TP53-227ENST00000622645 CYR61O00622 381 aa11.13□□□□□ -0.63
TP53-227ENST00000622645 SOCS6O14544 535 aa11.13□□□□□ -0.63
TP53-227ENST00000622645 STX11O75558 287 aa11.13□□□□□ -0.63
TP53-227ENST00000622645 IL1AP01583 271 aa11.13□□□□□ -0.63
TP53-227ENST00000622645 CTSBP07858 339 aa11.13□□□□□ -0.63
TP53-227ENST00000622645 ZGLP1P0C6A0 271 aa11.13□□□□□ -0.63
TP53-227ENST00000622645 ZNF10P21506 573 aaPredicted RBP11.13□□□□□ -0.63
TP53-227ENST00000622645 ATP6V1E1P36543 226 aa11.13□□□□□ -0.63
TP53-227ENST00000622645 ZNF791Q3KP31 576 aaPredicted RBP11.13□□□□□ -0.63
TP53-227ENST00000622645 SMARCD3Q6STE5 483 aa11.13□□□□□ -0.63
TP53-227ENST00000622645 CPOQ8IVL8 374 aa11.13□□□□□ -0.63
TP53-227ENST00000622645 COX18Q8N8Q8 333 aa11.13□□□□□ -0.63
TP53-227ENST00000622645 PFN4Q8NHR9 129 aa11.13□□□□□ -0.63
TP53-227ENST00000622645 BAHD1Q8TBE0 780 aaPredicted RBP11.13□□□□□ -0.63
TP53-227ENST00000622645 HMGB4Q8WW32 186 aa11.13□□□□□ -0.63
TP53-227ENST00000622645 RFKQ969G6 155 aa11.13□□□□□ -0.63
TP53-227ENST00000622645 UBQLN3Q9H347 655 aa11.13□□□□□ -0.63
TP53-227ENST00000622645 SIAEQ9HAT2 523 aa11.13□□□□□ -0.63
TP53-227ENST00000622645 CBLCQ9ULV8 474 aa11.13□□□□□ -0.63
TP53-227ENST00000622645 CDH10Q9Y6N8 788 aa11.13□□□□□ -0.63
TP53-227ENST00000622645 FANCMQ8IYD8 2048 aa11.13□□□□□ -0.63
TP53-227ENST00000622645 IQCMA0A1B0GVH7 501 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 A0A1W2PQL4 384 aaPredicted RBP11.12□□□□□ -0.63
TP53-227ENST00000622645 IRGMA1A4Y4 181 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 C2orf74A8MZ97 194 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 STK25O00506 426 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 SLC30A4O14863 429 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 ATP1B1P05026 303 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 GABRG2P18507 467 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 AKT2P31751 481 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 FXYD6P3P58550 94 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 SRSF5Q13243 272 aaKnown RBP11.12□□□□□ -0.63
TP53-227ENST00000622645 INSL4Q14641 139 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 SLC35F1Q5T1Q4 408 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 ZC3H14Q6PJT7 736 aaKnown RBP11.12□□□□□ -0.63
TP53-227ENST00000622645 NRARPQ7Z6K4 114 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 ZNF619Q8N2I2 560 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 CAMKK1Q8N5S9 505 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 NACC2Q96BF6 587 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 SECISBP2Q96T21 854 aaKnown RBP11.12□□□□□ -0.63
TP53-227ENST00000622645 ZNF649Q9BS31 505 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 KATNB1Q9BVA0 655 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 TEX12Q9BXU0 123 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 MIXL1Q9H2W2 232 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 WDR70Q9NW82 654 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 TRAPPC4Q9Y296 219 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 CMAHPQ9Y471 501 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 TRIOO75962 3097 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 BRWD1Q9NSI6 2320 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 GXYLT2A0PJZ3 443 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 ZC3H12DA2A288 527 aaKnown RBP11.12□□□□□ -0.63
TP53-227ENST00000622645 SYNDIG1LA6NDD5 238 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 A8MU76 341 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 SGK494L7N484 410 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 GPR75O95800 540 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 APOA1P02647 267 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 THBS1P07996 1170 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 CELP19835 753 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 MAKP20794 623 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 GABRA3P34903 492 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 VSX2P58304 361 aaPredicted RBP11.12□□□□□ -0.63
TP53-227ENST00000622645 ZNF155Q12901 538 aaPredicted RBP11.12□□□□□ -0.63
TP53-227ENST00000622645 OR1Q1Q15612 314 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 PRICKLE4Q2TBC4 344 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 DEFB110Q30KQ9 67 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 PLBD1Q6P4A8 553 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 QSOX2Q6ZRP7 698 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 ZAR1Q86SH2 424 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 RANBP3LQ86VV4 465 aaPredicted RBP11.12□□□□□ -0.63
TP53-227ENST00000622645 SLC37A2Q8TED4 501 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 TXNDC15Q96J42 360 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 TMED9Q9BVK6 235 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 HDHD5Q9BXW7 423 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 OR52D1Q9H346 318 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 MED20Q9H944 212 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 TBC1D17Q9HA65 648 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 IL21RQ9HBE5 538 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 LYRM4Q9HD34 91 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 CLDND1Q9NY35 253 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 MAT2BQ9NZL9 334 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 CLCA2Q9UQC9 943 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.12□□□□□ -0.63
TP53-227ENST00000622645 TRAPPC13A5PLN9 417 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 CDHR4A6H8M9 788 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 PLOD3O60568 738 aa11.12□□□□□ -0.63
TP53-227ENST00000622645 DBIP07108 87 aaKnown RBP11.12□□□□□ -0.63
TP53-227ENST00000622645 NID1P14543 1247 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms