RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 AK1P00568 194 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 LALBAP00709 142 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 GUSBP08236 651 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 POLR2CP19387 275 aaPredicted RBP8.77□□□□□ -1.01
PDPN-212ENST00000621990 DRD1P21728 446 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 TBXA2RP21731 343 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 CASP3P42574 277 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 RFX2P48378 723 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 LSSP48449 732 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 TMED10P49755 219 aaKnown RBP8.77□□□□□ -1.01
PDPN-212ENST00000621990 TPMTP51580 245 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 LBX1P52954 281 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 FXYD6P3P58550 94 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 ARF3P61204 181 aaPredicted RBP8.77□□□□□ -1.01
PDPN-212ENST00000621990 BDH1Q02338 343 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 GPR50Q13585 617 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 COL9A2Q14055 689 aaPredicted RBP8.77□□□□□ -1.01
PDPN-212ENST00000621990 BAK1Q16611 211 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 PRICKLE4Q2TBC4 344 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 ZMAT1Q5H9K5 638 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 VASNQ6EMK4 673 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 XKRXQ6PP77 449 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 WDR88Q6ZMY6 472 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 NCCRP1Q6ZVX7 275 aaPredicted RBP8.77□□□□□ -1.01
PDPN-212ENST00000621990 AP3S1Q92572 193 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 TM9SF2Q99805 663 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 UBQLN3Q9H347 655 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 FN3KQ9H479 309 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 EVA1AQ9H8M9 152 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 ABCB9Q9NP78 766 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 TRPV5Q9NQA5 729 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 POLE3Q9NRF9 147 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 GRIP1Q9Y3R0 1128 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 A0A1W2PQL4 384 aaPredicted RBP8.76□□□□□ -1.01
PDPN-212ENST00000621990 C2orf74A8MZ97 194 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 BHLHE40O14503 412 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 AKAP8O43823 692 aaKnown RBP8.76□□□□□ -1.01
PDPN-212ENST00000621990 FGF17O60258 216 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 GPR75O95800 540 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 CLEC2LP0C7M8 214 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 IL7P13232 177 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 PRG2P13727 222 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 GCGRP47871 477 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 PLAURQ03405 335 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 ASAH1Q13510 395 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 TCEA2Q15560 299 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 CRTC2Q53ET0 693 aaPredicted RBP8.76□□□□□ -1.01
PDPN-212ENST00000621990 CCNJQ5T5M9 372 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 DDI2Q5TDH0 399 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 AGAP6Q5VW22 663 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 SHFQ7M4L6 423 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 GID4Q8IVV7 300 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 GALNT12Q8IXK2 581 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 CELF2-AS1Q8N7Q2 184 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 GDPD1Q8N9F7 314 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 TMEM52Q8NDY8 209 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 BBS1Q8NFJ9 593 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 OR4F15Q8NGB8 312 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 RERGQ96A58 199 aaPredicted RBP8.76□□□□□ -1.01
PDPN-212ENST00000621990 C1GALT1C1Q96EU7 318 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 AGAP4Q96P64 663 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 TPK1Q9H3S4 243 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 HINT3Q9NQE9 182 aaKnown RBP8.76□□□□□ -1.01
PDPN-212ENST00000621990 ASB6Q9NWX5 421 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 MAT2BQ9NZL9 334 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 GSTK1Q9Y2Q3 226 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 HS3ST3A1Q9Y663 406 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 TRBV23OR9-2A0A075B6M9 112 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 UNC119BA6NIH7 251 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 LRRC72A6NJI9 287 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 RFXAPO00287 272 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 GALR3O60755 368 aaPredicted RBP8.76□□□□□ -1.01
PDPN-212ENST00000621990 CH25HO95992 272 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 MXD1Q05195 221 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 GPR68Q15743 365 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 EOGTQ5NDL2 527 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 MRPL2Q5T653 305 aaKnown RBP8.76□□□□□ -1.01
PDPN-212ENST00000621990 RPL13AP3Q6NVV1 102 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 ZNF322Q6U7Q0 402 aaPredicted RBP8.76□□□□□ -1.01
PDPN-212ENST00000621990 TMPRSS11FQ6ZWK6 438 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 PRSS41Q7RTY9 318 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 NRARPQ7Z6K4 114 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 ABI3BPQ7Z7G0 1075 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 LHFPL3Q86UP9 236 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 UBQLNLQ8IYU4 475 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 OR8H2Q8N162 312 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 LNX2Q8N448 690 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 KLHL36Q8N4N3 616 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 ARHGEF39Q8N4T4 335 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 ZNF655Q8N720 491 aaPredicted RBP8.76□□□□□ -1.01
PDPN-212ENST00000621990 SYT14Q8NB59 555 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 OR10G6Q8NH81 332 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 DNAJA4Q8WW22 397 aaPredicted RBP8.76□□□□□ -1.01
PDPN-212ENST00000621990 SAMD8Q96LT4 415 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 SOSTQ9BQB4 213 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 SIDT1Q9NXL6 827 aaKnown RBP8.76□□□□□ -1.01
PDPN-212ENST00000621990 CPNE7Q9UBL6 633 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 FBXL21Q9UKT6 434 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 POLHQ9Y253 713 aa8.76□□□□□ -1.01
PDPN-212ENST00000621990 SPACA6W5XKT8 324 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms