RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 PROM1O43490 865 aa16.26■□□□□ 0.19
FAM3A-222ENST00000621967 SSX4O60224 188 aa16.26■□□□□ 0.19
FAM3A-222ENST00000621967 LRP3O75074 770 aa16.26■□□□□ 0.19
FAM3A-222ENST00000621967 EIF2S1P05198 315 aaKnown RBP16.26■□□□□ 0.19
FAM3A-222ENST00000621967 IFNGR2P38484 337 aa16.26■□□□□ 0.19
FAM3A-222ENST00000621967 TAS2R41P59536 307 aa16.26■□□□□ 0.19
FAM3A-222ENST00000621967 RUNX1T1Q06455 604 aa16.26■□□□□ 0.19
FAM3A-222ENST00000621967 TPBGQ13641 420 aa16.26■□□□□ 0.19
FAM3A-222ENST00000621967 KIR2DS5Q14953 304 aa16.26■□□□□ 0.19
FAM3A-222ENST00000621967 TRAM2Q15035 370 aa16.26■□□□□ 0.19
FAM3A-222ENST00000621967 CARTPTQ16568 116 aa16.26■□□□□ 0.19
FAM3A-222ENST00000621967 MINDY4Q4G0A6 757 aa16.26■□□□□ 0.19
FAM3A-222ENST00000621967 ZNF311Q5JNZ3 666 aa16.26■□□□□ 0.19
FAM3A-222ENST00000621967 RASSF6Q6ZTQ3 369 aa16.26■□□□□ 0.19
FAM3A-222ENST00000621967 PATE1Q8WXA2 126 aa16.26■□□□□ 0.19
FAM3A-222ENST00000621967 ELP4Q96EB1 424 aa16.26■□□□□ 0.19
FAM3A-222ENST00000621967 SRRQ9GZT4 340 aa16.26■□□□□ 0.19
FAM3A-222ENST00000621967 CTPS2Q9NRF8 586 aa16.26■□□□□ 0.19
FAM3A-222ENST00000621967 CALML5Q9NZT1 146 aa16.26■□□□□ 0.19
FAM3A-222ENST00000621967 LIPT1Q9Y234 373 aa16.26■□□□□ 0.19
FAM3A-222ENST00000621967 SF3B6Q9Y3B4 125 aaKnown RBP16.26■□□□□ 0.19
FAM3A-222ENST00000621967 CMAHPQ9Y471 501 aa16.26■□□□□ 0.19
FAM3A-222ENST00000621967 CHST2Q9Y4C5 530 aa16.26■□□□□ 0.19
FAM3A-222ENST00000621967 OTOGLQ3ZCN5 2332 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 HTR3EA5X5Y0 456 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 SNTNA6NMZ2 147 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 PLD2O14939 933 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 ALPPP05187 535 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 MSL3P1P0C860 447 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 C8orf89P0DMQ9 161 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 MYL12AP19105 171 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 MPIP34949 423 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 MC3RP41968 323 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 OMPP47874 163 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 BCL2A1Q16548 175 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 AGAP6Q5VW22 663 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 NUP43Q8NFH3 380 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 SLC37A2Q8TED4 501 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 TM9SF4Q92544 642 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 GIMAP5Q96F15 307 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 AGAP4Q96P64 663 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 MED18Q9BUE0 208 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 DUSP23Q9BVJ7 150 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 SPHK1Q9NYA1 384 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 CARD8Q9Y2G2 431 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 GPR55Q9Y2T6 319 aaPredicted RBP16.25■□□□□ 0.19
FAM3A-222ENST00000621967 PCDHGB2Q9Y5G2 931 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 COLEC10Q9Y6Z7 277 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 CDRT1O95170 752 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 NR2F6P10588 404 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 CHRNEQ04844 493 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 CSRP2Q16527 193 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 C6orf132Q5T0Z8 1188 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 SPATC1Q76KD6 591 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 PRICKLE2Q7Z3G6 844 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 VRK2Q86Y07 508 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 OR9A2Q8NGT5 310 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 RNFT2Q96EX2 444 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 CTRCQ99895 268 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 EDEM2Q9BV94 578 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 HOXD1Q9GZZ0 328 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 KIR3DX1Q9H7L2 352 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 GIMAP4Q9NUV9 329 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 LYARQ9NX58 379 aaKnown RBP16.25■□□□□ 0.19
FAM3A-222ENST00000621967 NLGN3Q9NZ94 848 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 ZNF624Q9P2J8 865 aaPredicted RBP16.25■□□□□ 0.19
FAM3A-222ENST00000621967 POU2F3Q9UKI9 436 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 EXOSC1Q9Y3B2 195 aaKnown RBP16.25■□□□□ 0.19
FAM3A-222ENST00000621967 GRIP1Q9Y3R0 1128 aa16.25■□□□□ 0.19
FAM3A-222ENST00000621967 SPIN1Q9Y657 262 aaPredicted RBP16.25■□□□□ 0.19
FAM3A-222ENST00000621967 SCN2AQ99250 2005 aa16.24■□□□□ 0.19
FAM3A-222ENST00000621967 NDUFS1P28331 727 aa16.24■□□□□ 0.19
FAM3A-222ENST00000621967 CMPK1P30085 196 aa16.24■□□□□ 0.19
FAM3A-222ENST00000621967 PRKAR1BP31321 381 aa16.24■□□□□ 0.19
FAM3A-222ENST00000621967 TGM4P49221 684 aa16.24■□□□□ 0.19
FAM3A-222ENST00000621967 ST3GAL3Q11203 375 aa16.24■□□□□ 0.19
FAM3A-222ENST00000621967 GLYR1Q49A26 553 aaPredicted RBP16.24■□□□□ 0.19
FAM3A-222ENST00000621967 ZMAT1Q5H9K5 638 aa16.24■□□□□ 0.19
FAM3A-222ENST00000621967 LAPTM4BQ86VI4 370 aa16.24■□□□□ 0.19
FAM3A-222ENST00000621967 SFTPA2Q8IWL1 248 aa16.24■□□□□ 0.19
FAM3A-222ENST00000621967 OR8H2Q8N162 312 aa16.24■□□□□ 0.19
FAM3A-222ENST00000621967 AVL9Q8NBF6 648 aa16.24■□□□□ 0.19
FAM3A-222ENST00000621967 ZNF485Q8NCK3 441 aa16.24■□□□□ 0.19
FAM3A-222ENST00000621967 ANKK1Q8NFD2 765 aa16.24■□□□□ 0.19
FAM3A-222ENST00000621967 SLC38A2Q96QD8 506 aa16.24■□□□□ 0.19
FAM3A-222ENST00000621967 PRR14Q9BWN1 585 aa16.24■□□□□ 0.19
FAM3A-222ENST00000621967 POT1Q9NUX5 634 aa16.24■□□□□ 0.19
FAM3A-222ENST00000621967 CPNE7Q9UBL6 633 aa16.24■□□□□ 0.19
FAM3A-222ENST00000621967 PLEKHB1Q9UF11 243 aaPredicted RBP16.24■□□□□ 0.19
FAM3A-222ENST00000621967 ZIC2O95409 532 aaPredicted RBP16.23■□□□□ 0.19
FAM3A-222ENST00000621967 TSPAN19P0C672 248 aa16.23■□□□□ 0.19
FAM3A-222ENST00000621967 ZNF883P0CG24 379 aa16.23■□□□□ 0.19
FAM3A-222ENST00000621967 MTNR1AP48039 350 aa16.23■□□□□ 0.19
FAM3A-222ENST00000621967 RAB8AP61006 207 aa16.23■□□□□ 0.19
FAM3A-222ENST00000621967 STXBP1P61764 594 aaKnown RBP16.23■□□□□ 0.19
FAM3A-222ENST00000621967 TGM3Q08188 693 aa16.23■□□□□ 0.19
FAM3A-222ENST00000621967 SUZ12Q15022 739 aaKnown RBP16.23■□□□□ 0.19
FAM3A-222ENST00000621967 OR2G6Q5TZ20 316 aa16.23■□□□□ 0.19
FAM3A-222ENST00000621967 HEPHL1Q6MZM0 1159 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms