RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 THAP10Q9P2Z0 257 aaPredicted RBP10.71□□□□□ -0.69
CLIP1-219ENST00000620786 RIMS3Q9UJD0 308 aa10.71□□□□□ -0.69
CLIP1-219ENST00000620786 COL16A1Q07092 1604 aaPredicted RBP10.71□□□□□ -0.7
CLIP1-219ENST00000620786 MYH6P13533 1939 aa10.71□□□□□ -0.7
CLIP1-219ENST00000620786 SOBPA7XYQ1 873 aa10.71□□□□□ -0.7
CLIP1-219ENST00000620786 GPR39O43194 453 aa10.71□□□□□ -0.7
CLIP1-219ENST00000620786 OR2T1O43869 369 aa10.71□□□□□ -0.7
CLIP1-219ENST00000620786 BMP4P12644 408 aa10.71□□□□□ -0.7
CLIP1-219ENST00000620786 RPS5P46782 204 aaKnown RBP10.71□□□□□ -0.7
CLIP1-219ENST00000620786 FNTBP49356 437 aa10.71□□□□□ -0.7
CLIP1-219ENST00000620786 PRKXP51817 358 aa10.71□□□□□ -0.7
CLIP1-219ENST00000620786 RAB38P57729 211 aa10.71□□□□□ -0.7
CLIP1-219ENST00000620786 SLC22A16Q86VW1 577 aa10.71□□□□□ -0.7
CLIP1-219ENST00000620786 ADAMTS19Q8TE59 1207 aa10.71□□□□□ -0.7
CLIP1-219ENST00000620786 ZNF480Q8WV37 535 aa10.71□□□□□ -0.7
CLIP1-219ENST00000620786 TMEM239Q8WW34 195 aa10.71□□□□□ -0.7
CLIP1-219ENST00000620786 HIF3AQ9Y2N7 669 aa10.71□□□□□ -0.7
CLIP1-219ENST00000620786 IER3IP1Q9Y5U9 82 aa10.71□□□□□ -0.7
CLIP1-219ENST00000620786 PLCH1Q4KWH8 1693 aa10.71□□□□□ -0.7
CLIP1-219ENST00000620786 CRTAPO75718 401 aaPredicted RBP10.71□□□□□ -0.7
CLIP1-219ENST00000620786 GLSO94925 669 aaPredicted RBP10.71□□□□□ -0.7
CLIP1-219ENST00000620786 SLC5A2P31639 672 aa10.71□□□□□ -0.7
CLIP1-219ENST00000620786 RGS19P49795 217 aa10.71□□□□□ -0.7
CLIP1-219ENST00000620786 GTDC1Q4AE62 458 aa10.71□□□□□ -0.7
CLIP1-219ENST00000620786 FAM76BQ5HYJ3 339 aa10.71□□□□□ -0.7
CLIP1-219ENST00000620786 OR5L1Q8NGL2 311 aa10.71□□□□□ -0.7
CLIP1-219ENST00000620786 INIPQ9NRY2 104 aa10.71□□□□□ -0.7
CLIP1-219ENST00000620786 OBP2AQ9NY56 170 aa10.71□□□□□ -0.7
CLIP1-219ENST00000620786 LOC285095A0A1B0GVY8 99 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 FRS3O43559 492 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 STSP08842 583 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 DCAF7P61962 342 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 XKRXQ6PP77 449 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 KLHL15Q96M94 604 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 R3HDMLQ9H3Y0 253 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 NMNAT1Q9HAN9 279 aaPredicted RBP10.7□□□□□ -0.7
CLIP1-219ENST00000620786 MYEF2Q9P2K5 600 aaKnown RBP10.7□□□□□ -0.7
CLIP1-219ENST00000620786 ZNF443Q9Y2A4 671 aaPredicted RBP10.7□□□□□ -0.7
CLIP1-219ENST00000620786 TMEM184BQ9Y519 407 aaPredicted RBP10.7□□□□□ -0.7
CLIP1-219ENST00000620786 ENPP4Q9Y6X5 453 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 G3V2L1 256 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 HMGN2P05204 90 aaKnown RBP10.7□□□□□ -0.7
CLIP1-219ENST00000620786 DCTP40126 519 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 MTNR1AP48039 350 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 RACK1P63244 317 aaKnown RBP10.7□□□□□ -0.7
CLIP1-219ENST00000620786 MGAT3Q09327 533 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 METTL2BQ6P1Q9 378 aaKnown RBP10.7□□□□□ -0.7
CLIP1-219ENST00000620786 CENPSQ8N2Z9 138 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 ZADH2Q8N4Q0 377 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 SDR9C7Q8NEX9 313 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 MAFAQ8NHW3 353 aaPredicted RBP10.7□□□□□ -0.7
CLIP1-219ENST00000620786 LRRC20Q8TCA0 184 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 RSC1A1Q92681 617 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 OBP2BQ9NPH6 170 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 MEPEQ9NQ76 525 aaPredicted RBP10.7□□□□□ -0.7
CLIP1-219ENST00000620786 SLC6A14Q9UN76 642 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 FAM230AA0A1W2PPH8 454 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 RAD1O60671 282 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 MRPL33O75394 65 aaKnown RBP10.7□□□□□ -0.7
CLIP1-219ENST00000620786 PTHP01270 115 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 HIST1H1TP22492 207 aaPredicted RBP10.7□□□□□ -0.7
CLIP1-219ENST00000620786 AKR1C2P52895 323 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 AIMP2Q13155 320 aaKnown RBP10.7□□□□□ -0.7
CLIP1-219ENST00000620786 PPA1Q15181 289 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 SIX1Q15475 284 aaPredicted RBP10.7□□□□□ -0.7
CLIP1-219ENST00000620786 VHLLQ6RSH7 139 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 B3GNT9Q6UX72 402 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 ZNF595Q8IYB9 648 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 ANKK1Q8NFD2 765 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 OR6Q1Q8NGQ2 317 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 SGCZQ96LD1 299 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 OR7D2Q96RA2 312 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 FEVQ99581 238 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 HDHD5Q9BXW7 423 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 STUB1Q9UNE7 303 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 F10P00742 488 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 IFNA7P01567 189 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 CD27P26842 260 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 PCGF2P35227 344 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 ART1P52961 327 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 FOXA1P55317 472 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 DEFA5Q01523 94 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 DUSP6Q16828 381 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 MICAQ29983 383 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 ZBTB8BQ8NAP8 495 aaPredicted RBP10.7□□□□□ -0.7
CLIP1-219ENST00000620786 LMF1Q96S06 567 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 GSTO2Q9H4Y5 243 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 MOV10Q9HCE1 1003 aaKnown RBP10.7□□□□□ -0.7
CLIP1-219ENST00000620786 KCND3Q9UK17 655 aa10.7□□□□□ -0.7
CLIP1-219ENST00000620786 NUDT21O43809 227 aaKnown RBP10.69□□□□□ -0.7
CLIP1-219ENST00000620786 CACNG3O60359 315 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 SLITRK5O94991 958 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 OSMP13725 252 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 HSD17B7P56937 341 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 GLO1Q04760 184 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 SMAD4Q13485 552 aaKnown RBP10.69□□□□□ -0.7
CLIP1-219ENST00000620786 COQ5Q5HYK3 327 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 PIP5KL1Q5T9C9 394 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 PLCXD3Q63HM9 321 aa10.69□□□□□ -0.7
CLIP1-219ENST00000620786 ADIPOR2Q86V24 386 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms