RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 CPSF4O95639 269 aaKnown RBP14.5□□□□□ -0.09
BRCA1-228ENST00000618469 HOXD4P09016 255 aaPredicted RBP14.5□□□□□ -0.09
BRCA1-228ENST00000618469 HPGDP15428 266 aa14.5□□□□□ -0.09
BRCA1-228ENST00000618469 ATP6V1C1P21283 382 aa14.5□□□□□ -0.09
BRCA1-228ENST00000618469 S100A3P33764 101 aa14.5□□□□□ -0.09
BRCA1-228ENST00000618469 ADH7P40394 386 aa14.5□□□□□ -0.09
BRCA1-228ENST00000618469 DSCR4P56555 118 aaPredicted RBP14.5□□□□□ -0.09
BRCA1-228ENST00000618469 GANABQ14697 944 aaKnown RBP14.5□□□□□ -0.09
BRCA1-228ENST00000618469 DCST2Q5T1A1 773 aa14.5□□□□□ -0.09
BRCA1-228ENST00000618469 RAET1LQ5VY80 246 aa14.5□□□□□ -0.09
BRCA1-228ENST00000618469 AAGABQ6PD74 315 aa14.5□□□□□ -0.09
BRCA1-228ENST00000618469 ENPP6Q6UWR7 440 aa14.5□□□□□ -0.09
BRCA1-228ENST00000618469 APOOLQ6UXV4 268 aa14.5□□□□□ -0.09
BRCA1-228ENST00000618469 VPS37AQ8NEZ2 397 aa14.5□□□□□ -0.09
BRCA1-228ENST00000618469 OR4C3Q8NH37 302 aa14.5□□□□□ -0.09
BRCA1-228ENST00000618469 FAM110BQ8TC76 370 aa14.5□□□□□ -0.09
BRCA1-228ENST00000618469 DUSP19Q8WTR2 217 aa14.5□□□□□ -0.09
BRCA1-228ENST00000618469 WDYHV1Q96HA8 205 aa14.5□□□□□ -0.09
BRCA1-228ENST00000618469 MAELQ96JY0 434 aaKnown RBP14.5□□□□□ -0.09
BRCA1-228ENST00000618469 C7orf26Q96N11 449 aa14.5□□□□□ -0.09
BRCA1-228ENST00000618469 OR7D2Q96RA2 312 aa14.5□□□□□ -0.09
BRCA1-228ENST00000618469 ZBTB18Q99592 522 aa14.5□□□□□ -0.09
BRCA1-228ENST00000618469 SERHL2Q9H4I8 314 aa14.5□□□□□ -0.09
BRCA1-228ENST00000618469 PTGES2Q9H7Z7 377 aa14.5□□□□□ -0.09
BRCA1-228ENST00000618469 SLCO1B3Q9NPD5 702 aa14.5□□□□□ -0.09
BRCA1-228ENST00000618469 GIN1Q9NXP7 522 aa14.5□□□□□ -0.09
BRCA1-228ENST00000618469 Q9UFV3 132 aa14.5□□□□□ -0.09
BRCA1-228ENST00000618469 GPR45Q9Y5Y3 372 aa14.5□□□□□ -0.09
BRCA1-228ENST00000618469 USH1CQ9Y6N9 552 aa14.5□□□□□ -0.09
BRCA1-228ENST00000618469 MED12Q93074 2177 aa14.5□□□□□ -0.09
BRCA1-228ENST00000618469 NUP214P35658 2090 aaPredicted RBP14.5□□□□□ -0.09
BRCA1-228ENST00000618469 KIAA1549Q9HCM3 1950 aa14.49□□□□□ -0.09
BRCA1-228ENST00000618469 PRSS51A0A1B0GVH4 220 aa14.49□□□□□ -0.09
BRCA1-228ENST00000618469 NKX2-6A6NCS4 301 aa14.49□□□□□ -0.09
BRCA1-228ENST00000618469 AHRRA9YTQ3 701 aa14.49□□□□□ -0.09
BRCA1-228ENST00000618469 ALG1L2C9J202 215 aa14.49□□□□□ -0.09
BRCA1-228ENST00000618469 FAM47E-STBD1D6RA91 191 aa14.49□□□□□ -0.09
BRCA1-228ENST00000618469 SCDO00767 359 aa14.49□□□□□ -0.09
BRCA1-228ENST00000618469 NDUFB5O43674 189 aa14.49□□□□□ -0.09
BRCA1-228ENST00000618469 SCN2BO60939 215 aa14.49□□□□□ -0.09
BRCA1-228ENST00000618469 SASH3O75995 380 aa14.49□□□□□ -0.09
BRCA1-228ENST00000618469 NGFRP08138 427 aa14.49□□□□□ -0.09
BRCA1-228ENST00000618469 IDO1P14902 403 aa14.49□□□□□ -0.09
BRCA1-228ENST00000618469 HK1P19367 917 aa14.49□□□□□ -0.09
BRCA1-228ENST00000618469 IL12AP29459 219 aa14.49□□□□□ -0.09
BRCA1-228ENST00000618469 DGKQP52824 942 aa14.49□□□□□ -0.09
BRCA1-228ENST00000618469 GFRA1P56159 465 aa14.49□□□□□ -0.09
BRCA1-228ENST00000618469 PPP2R2AP63151 447 aa14.49□□□□□ -0.09
BRCA1-228ENST00000618469 PHC1P78364 1004 aa14.49□□□□□ -0.09
BRCA1-228ENST00000618469 LACC1Q8IV20 430 aa14.49□□□□□ -0.09
BRCA1-228ENST00000618469 ACTRT2Q8TDY3 377 aa14.49□□□□□ -0.09
BRCA1-228ENST00000618469 OR52B2Q96RD2 323 aa14.49□□□□□ -0.09
BRCA1-228ENST00000618469 TRIB1Q96RU8 372 aa14.49□□□□□ -0.09
BRCA1-228ENST00000618469 KCNE3Q9Y6H6 103 aa14.49□□□□□ -0.09
BRCA1-228ENST00000618469 NPIPA5A0A0B4J1W7 369 aa14.48□□□□□ -0.09
BRCA1-228ENST00000618469 NPIPA7E9PJI5 369 aa14.48□□□□□ -0.09
BRCA1-228ENST00000618469 ZNF195O14628 629 aa14.48□□□□□ -0.09
BRCA1-228ENST00000618469 NPIPA8P0DM63 369 aa14.48□□□□□ -0.09
BRCA1-228ENST00000618469 TBXA2RP21731 343 aa14.48□□□□□ -0.09
BRCA1-228ENST00000618469 LCN1P31025 176 aa14.48□□□□□ -0.09
BRCA1-228ENST00000618469 ZFP36L2P47974 494 aaKnown RBP14.48□□□□□ -0.09
BRCA1-228ENST00000618469 STARP49675 285 aa14.48□□□□□ -0.09
BRCA1-228ENST00000618469 CASP9P55211 416 aa14.48□□□□□ -0.09
BRCA1-228ENST00000618469 SRYQ05066 204 aa14.48□□□□□ -0.09
BRCA1-228ENST00000618469 C17orf67Q0P5P2 114 aa14.48□□□□□ -0.09
BRCA1-228ENST00000618469 RCAN2Q14206 197 aa14.48□□□□□ -0.09
BRCA1-228ENST00000618469 SF3B4Q15427 424 aaKnown RBP eCLIP14.48□□□□□ -0.09
BRCA1-228ENST00000618469 PDCD4Q53EL6 469 aaKnown RBP14.48□□□□□ -0.09
BRCA1-228ENST00000618469 RIPPLY2Q5TAB7 128 aa14.48□□□□□ -0.09
BRCA1-228ENST00000618469 SEM1Q6ZVN7 128 aa14.48□□□□□ -0.09
BRCA1-228ENST00000618469 C6orf120Q7Z4R8 191 aa14.48□□□□□ -0.09
BRCA1-228ENST00000618469 C1GALT1C1Q96EU7 318 aa14.48□□□□□ -0.09
BRCA1-228ENST00000618469 CCDC115Q96NT0 180 aa14.48□□□□□ -0.09
BRCA1-228ENST00000618469 UCK2Q9BZX2 261 aa14.48□□□□□ -0.09
BRCA1-228ENST00000618469 UBQLN4Q9NRR5 601 aa14.48□□□□□ -0.09
BRCA1-228ENST00000618469 INTS9Q9NV88 658 aaKnown RBP14.48□□□□□ -0.09
BRCA1-228ENST00000618469 MRPS18CQ9Y3D5 142 aaKnown RBP14.48□□□□□ -0.09
BRCA1-228ENST00000618469 IGLV3-32A0A0A0MS00 114 aa14.47□□□□□ -0.09
BRCA1-228ENST00000618469 ZIC3O60481 467 aa14.47□□□□□ -0.09
BRCA1-228ENST00000618469 EPPINO95925 133 aa14.47□□□□□ -0.09
BRCA1-228ENST00000618469 PGRP06401 933 aa14.47□□□□□ -0.09
BRCA1-228ENST00000618469 HOXB4P17483 251 aaPredicted RBP14.47□□□□□ -0.09
BRCA1-228ENST00000618469 MATN1P21941 496 aa14.47□□□□□ -0.09
BRCA1-228ENST00000618469 UQCRC2P22695 453 aa14.47□□□□□ -0.09
BRCA1-228ENST00000618469 CHMP24386 653 aa14.47□□□□□ -0.09
BRCA1-228ENST00000618469 CHI3L1P36222 383 aaPredicted RBP14.47□□□□□ -0.09
BRCA1-228ENST00000618469 LHX2P50458 406 aa14.47□□□□□ -0.09
BRCA1-228ENST00000618469 RNF144AP50876 292 aaPredicted RBP14.47□□□□□ -0.09
BRCA1-228ENST00000618469 B3GALT5-AS1P59052 145 aa14.47□□□□□ -0.09
BRCA1-228ENST00000618469 CD226Q15762 336 aa14.47□□□□□ -0.09
BRCA1-228ENST00000618469 FLYWCH1Q4VC44 716 aa14.47□□□□□ -0.09
BRCA1-228ENST00000618469 NSUN5P2Q63ZY6 315 aa14.47□□□□□ -0.09
BRCA1-228ENST00000618469 ZNF614Q8N883 585 aa14.47□□□□□ -0.09
BRCA1-228ENST00000618469 NAXEQ8NCW5 288 aa14.47□□□□□ -0.09
BRCA1-228ENST00000618469 TNIP2Q8NFZ5 429 aa14.47□□□□□ -0.09
BRCA1-228ENST00000618469 OR5M1Q8NGP8 315 aa14.47□□□□□ -0.09
BRCA1-228ENST00000618469 LILRB4Q8NHJ6 448 aa14.47□□□□□ -0.09
BRCA1-228ENST00000618469 SH3YL1Q96HL8 342 aaPredicted RBP14.47□□□□□ -0.09
BRCA1-228ENST00000618469 OR52E6Q96RD3 313 aa14.47□□□□□ -0.09
BRCA1-228ENST00000618469 TUBA1CQ9BQE3 449 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms