RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 C20orf141Q9NUB4 165 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 TOR4AQ9NXH8 423 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 CNOT2Q9NZN8 540 aaKnown RBP11.53□□□□□ -0.56
CIITA-212ENST00000618207 DAPK2Q9UIK4 370 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 YARS2Q9Y2Z4 477 aaKnown RBP11.53□□□□□ -0.56
CIITA-212ENST00000618207 TGFBR3LH3BV60 316 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 CCRL2O00421 344 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 DSCR3O14972 297 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 PEX14O75381 377 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 GSTT2P0CG29 244 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 GSTT2BP0CG30 244 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 S100A1P23297 94 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 HTR2AP28223 471 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 ZNF136P52737 540 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 CDK5Q00535 292 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 ZNF267Q14586 743 aaPredicted RBP11.53□□□□□ -0.56
CIITA-212ENST00000618207 ZNF404Q494X3 552 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 PDZK1Q5T2W1 519 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 FHL5Q5TD97 284 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 FCRLBQ6BAA4 426 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 PIAS4Q8N2W9 510 aaPredicted RBP11.53□□□□□ -0.56
CIITA-212ENST00000618207 BBS1Q8NFJ9 593 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 OR4Q3Q8NH05 313 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 GNPDA2Q8TDQ7 276 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 ACOT11Q8WXI4 607 aaPredicted RBP11.53□□□□□ -0.56
CIITA-212ENST00000618207 CRELD1Q96HD1 420 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 SAMD8Q96LT4 415 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 HSPA12BQ96MM6 686 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 AKIP1Q9NQ31 210 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 UCKL1Q9NWZ5 548 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 OSGIN1Q9UJX0 560 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 FBXL21Q9UKT6 434 aa11.53□□□□□ -0.56
CIITA-212ENST00000618207 GPX5O75715 221 aa11.52□□□□□ -0.56
CIITA-212ENST00000618207 SLITRK5O94991 958 aa11.52□□□□□ -0.56
CIITA-212ENST00000618207 IFNA16P05015 189 aa11.52□□□□□ -0.56
CIITA-212ENST00000618207 ATP1B1P05026 303 aa11.52□□□□□ -0.56
CIITA-212ENST00000618207 PROS1P07225 676 aa11.52□□□□□ -0.56
CIITA-212ENST00000618207 CSTF2P33240 577 aaKnown RBP eCLIP11.52□□□□□ -0.56
CIITA-212ENST00000618207 CD79BP40259 229 aa11.52□□□□□ -0.56
CIITA-212ENST00000618207 TSPAN31Q12999 210 aa11.52□□□□□ -0.56
CIITA-212ENST00000618207 RGS21Q2M5E4 152 aa11.52□□□□□ -0.56
CIITA-212ENST00000618207 LRIT3Q3SXY7 679 aa11.52□□□□□ -0.56
CIITA-212ENST00000618207 AMZ1Q400G9 498 aa11.52□□□□□ -0.56
CIITA-212ENST00000618207 FLYWCH1Q4VC44 716 aa11.52□□□□□ -0.56
CIITA-212ENST00000618207 DCDC5Q6ZRR9 648 aa11.52□□□□□ -0.56
CIITA-212ENST00000618207 ZNF367Q7RTV3 350 aa11.52□□□□□ -0.56
CIITA-212ENST00000618207 ZNF619Q8N2I2 560 aa11.52□□□□□ -0.56
CIITA-212ENST00000618207 CDRT4Q8N9R6 151 aa11.52□□□□□ -0.56
CIITA-212ENST00000618207 OR52I1Q8NGK6 324 aa11.52□□□□□ -0.56
CIITA-212ENST00000618207 GATAD2BQ8WXI9 593 aa11.52□□□□□ -0.56
CIITA-212ENST00000618207 POLDIP3Q9BY77 421 aaKnown RBP11.52□□□□□ -0.56
CIITA-212ENST00000618207 ENKD1Q9H0I2 346 aa11.52□□□□□ -0.56
CIITA-212ENST00000618207 MED20Q9H944 212 aa11.52□□□□□ -0.56
CIITA-212ENST00000618207 HHATLQ9HCP6 504 aa11.52□□□□□ -0.56
CIITA-212ENST00000618207 ABCB10Q9NRK6 738 aa11.52□□□□□ -0.56
CIITA-212ENST00000618207 IGHV5-51A0A0C4DH38 117 aa11.52□□□□□ -0.57
CIITA-212ENST00000618207 ZC3H12DA2A288 527 aaKnown RBP11.52□□□□□ -0.57
CIITA-212ENST00000618207 A8MUA0 341 aa11.52□□□□□ -0.57
CIITA-212ENST00000618207 CBX7O95931 251 aa11.52□□□□□ -0.57
CIITA-212ENST00000618207 ALAS2P22557 587 aa11.52□□□□□ -0.57
CIITA-212ENST00000618207 ATP6V1E1P36543 226 aa11.52□□□□□ -0.57
CIITA-212ENST00000618207 IFNGR2P38484 337 aa11.52□□□□□ -0.57
CIITA-212ENST00000618207 POU6F2P78424 691 aaPredicted RBP11.52□□□□□ -0.57
CIITA-212ENST00000618207 OR1Q1Q15612 314 aa11.52□□□□□ -0.57
CIITA-212ENST00000618207 NDUFA9Q16795 377 aa11.52□□□□□ -0.57
CIITA-212ENST00000618207 NDUFAF6Q330K2 333 aa11.52□□□□□ -0.57
CIITA-212ENST00000618207 USP43Q70EL4 1123 aa11.52□□□□□ -0.57
CIITA-212ENST00000618207 PRSS58Q8IYP2 241 aa11.52□□□□□ -0.57
CIITA-212ENST00000618207 PSD4Q8NDX1 1056 aa11.52□□□□□ -0.57
CIITA-212ENST00000618207 OR4F15Q8NGB8 312 aa11.52□□□□□ -0.57
CIITA-212ENST00000618207 CNOT9Q92600 299 aaKnown RBP11.52□□□□□ -0.57
CIITA-212ENST00000618207 RNFT2Q96EX2 444 aa11.52□□□□□ -0.57
CIITA-212ENST00000618207 TRMT61AQ96FX7 289 aaKnown RBP11.52□□□□□ -0.57
CIITA-212ENST00000618207 SPACA7Q96KW9 195 aa11.52□□□□□ -0.57
CIITA-212ENST00000618207 NDOR1Q9UHB4 597 aa11.52□□□□□ -0.57
CIITA-212ENST00000618207 TMEM184BQ9Y519 407 aaPredicted RBP11.52□□□□□ -0.57
CIITA-212ENST00000618207 PI4KAP42356 2102 aa11.52□□□□□ -0.57
CIITA-212ENST00000618207 CACNA1CQ13936 2221 aa11.51□□□□□ -0.57
CIITA-212ENST00000618207 A8MU76 341 aa11.51□□□□□ -0.57
CIITA-212ENST00000618207 IFI30P13284 250 aa11.51□□□□□ -0.57
CIITA-212ENST00000618207 GSTM3P21266 225 aa11.51□□□□□ -0.57
CIITA-212ENST00000618207 SLC16A1P53985 500 aa11.51□□□□□ -0.57
CIITA-212ENST00000618207 RAB38P57729 211 aa11.51□□□□□ -0.57
CIITA-212ENST00000618207 EEF1A1P68104 462 aaKnown RBP11.51□□□□□ -0.57
CIITA-212ENST00000618207 MGAT2Q10469 447 aa11.51□□□□□ -0.57
CIITA-212ENST00000618207 DUSP8Q13202 625 aa11.51□□□□□ -0.57
CIITA-212ENST00000618207 PRAMEF8Q5VWM4 474 aa11.51□□□□□ -0.57
CIITA-212ENST00000618207 PRAMEF7Q5VXH5 474 aa11.51□□□□□ -0.57
CIITA-212ENST00000618207 Q6ZNX1 250 aa11.51□□□□□ -0.57
CIITA-212ENST00000618207 AMER2Q8N7J2 671 aa11.51□□□□□ -0.57
CIITA-212ENST00000618207 C9orf43Q8TAL5 461 aaPredicted RBP11.51□□□□□ -0.57
CIITA-212ENST00000618207 RIT1Q92963 219 aa11.51□□□□□ -0.57
CIITA-212ENST00000618207 ART5Q96L15 291 aa11.51□□□□□ -0.57
CIITA-212ENST00000618207 TBX5Q99593 518 aa11.51□□□□□ -0.57
CIITA-212ENST00000618207 ZNF350Q9GZX5 532 aa11.51□□□□□ -0.57
CIITA-212ENST00000618207 SPIN1Q9Y657 262 aaPredicted RBP11.51□□□□□ -0.57
CIITA-212ENST00000618207 RGS5O15539 181 aa11.51□□□□□ -0.57
CIITA-212ENST00000618207 FOXS1O43638 330 aa11.51□□□□□ -0.57
CIITA-212ENST00000618207 GMFGO60234 142 aa11.51□□□□□ -0.57
CIITA-212ENST00000618207 PLOD3O60568 738 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms