RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 A0A1W2PQU0 124 aa20.52■□□□□ 0.87
POLR2J3-220ENST00000613744 M0R233 179 aa20.52■□□□□ 0.87
POLR2J3-220ENST00000613744 SLC28A2O43868 658 aa20.52■□□□□ 0.87
POLR2J3-220ENST00000613744 GPR37L1O60883 481 aa20.52■□□□□ 0.87
POLR2J3-220ENST00000613744 SEMA4FO95754 770 aa20.52■□□□□ 0.87
POLR2J3-220ENST00000613744 TP53P04637 393 aaPredicted RBP20.52■□□□□ 0.87
POLR2J3-220ENST00000613744 TIA1P31483 386 aaKnown RBP eCLIP20.52■□□□□ 0.87
POLR2J3-220ENST00000613744 CHI3L1P36222 383 aaPredicted RBP20.52■□□□□ 0.87
POLR2J3-220ENST00000613744 LIM2P55344 173 aa20.52■□□□□ 0.87
POLR2J3-220ENST00000613744 TAP2Q03519 686 aa20.52■□□□□ 0.87
POLR2J3-220ENST00000613744 SRSF5Q13243 272 aaKnown RBP20.52■□□□□ 0.87
POLR2J3-220ENST00000613744 MINDY4Q4G0A6 757 aa20.52■□□□□ 0.87
POLR2J3-220ENST00000613744 RAET1GQ6H3X3 334 aa20.52■□□□□ 0.87
POLR2J3-220ENST00000613744 GRHL2Q6ISB3 625 aa20.52■□□□□ 0.87
POLR2J3-220ENST00000613744 WDR53Q7Z5U6 358 aaPredicted RBP20.52■□□□□ 0.87
POLR2J3-220ENST00000613744 MARCH9Q86YJ5 346 aa20.52■□□□□ 0.87
POLR2J3-220ENST00000613744 CEP76Q8TAP6 659 aa20.52■□□□□ 0.87
POLR2J3-220ENST00000613744 SLC9A6Q92581 669 aa20.52■□□□□ 0.87
POLR2J3-220ENST00000613744 C7orf50Q9BRJ6 194 aaKnown RBP20.52■□□□□ 0.87
POLR2J3-220ENST00000613744 PELOQ9BRX2 385 aaKnown RBP20.52■□□□□ 0.87
POLR2J3-220ENST00000613744 DLL4Q9NR61 685 aa20.52■□□□□ 0.87
POLR2J3-220ENST00000613744 WSB2Q9NYS7 404 aaPredicted RBP20.52■□□□□ 0.87
POLR2J3-220ENST00000613744 TRPM6Q9BX84 2022 aa20.51■□□□□ 0.87
POLR2J3-220ENST00000613744 AGAP14A8MT82 685 aa20.51■□□□□ 0.87
POLR2J3-220ENST00000613744 AGRPO00253 132 aa20.51■□□□□ 0.87
POLR2J3-220ENST00000613744 TSPAN6O43657 245 aa20.51■□□□□ 0.87
POLR2J3-220ENST00000613744 ZNF217O75362 1048 aa20.51■□□□□ 0.87
POLR2J3-220ENST00000613744 PAK4O96013 591 aaPredicted RBP20.51■□□□□ 0.87
POLR2J3-220ENST00000613744 ELK1P19419 428 aa20.51■□□□□ 0.87
POLR2J3-220ENST00000613744 DCDC1P59894 354 aa20.51■□□□□ 0.87
POLR2J3-220ENST00000613744 BTN1A1Q13410 526 aa20.51■□□□□ 0.87
POLR2J3-220ENST00000613744 PUM1Q14671 1186 aaKnown RBP eCLIP20.51■□□□□ 0.87
POLR2J3-220ENST00000613744 CYP27C1Q4G0S4 372 aa20.51■□□□□ 0.87
POLR2J3-220ENST00000613744 OR2G6Q5TZ20 316 aa20.51■□□□□ 0.87
POLR2J3-220ENST00000613744 GATAD2BQ8WXI9 593 aa20.51■□□□□ 0.87
POLR2J3-220ENST00000613744 LRR1Q96L50 414 aa20.51■□□□□ 0.87
POLR2J3-220ENST00000613744 FUZQ9BT04 418 aa20.51■□□□□ 0.87
POLR2J3-220ENST00000613744 ACTR6Q9GZN1 396 aa20.51■□□□□ 0.87
POLR2J3-220ENST00000613744 NUDT15Q9NV35 164 aa20.51■□□□□ 0.87
POLR2J3-220ENST00000613744 DNMT3AQ9Y6K1 912 aaPredicted RBP20.51■□□□□ 0.87
POLR2J3-220ENST00000613744 DMDP11532 3685 aa20.51■□□□□ 0.87
POLR2J3-220ENST00000613744 GPR171O14626 319 aa20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 PAHP00439 452 aa20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 TCRBP04435 133 aa20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 DSTNP60981 165 aa20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 MAP4K2Q12851 820 aa20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 FGL2Q14314 439 aa20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 ATP13A5Q4VNC0 1218 aa20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 REEP3Q6NUK4 255 aa20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 UNC5DQ6UXZ4 953 aa20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 SLC36A4Q6YBV0 504 aa20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 RNF175Q8N4F7 328 aa20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 OR4K3Q96R72 315 aa20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 PKP4Q99569 1192 aa20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 RIOK2Q9BVS4 552 aaKnown RBP20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 IFT46Q9NQC8 304 aa20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 ENAMQ9NRM1 1142 aa20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 SDHAF2Q9NX18 166 aa20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 KCMF1Q9P0J7 381 aa20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 MBD1Q9UIS9 605 aaPredicted RBP20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 ACAD8Q9UKU7 415 aa20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 ZNF175Q9Y473 711 aa20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 EML5Q05BV3 1969 aa20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 FAM227AF5H4B4 570 aa20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 GFYI3L273 518 aa20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 GABRPO00591 440 aa20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 SLC31A1O15431 190 aa20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 IGFBP1P08833 259 aaPredicted RBP20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 TDGF1P13385 188 aa20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 BCKDHBP21953 392 aa20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 ITPKAP23677 461 aa20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 MTNR1BP49286 362 aa20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 PFN3P60673 137 aa20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 CDK5Q00535 292 aa20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 NHLRC3Q5JS37 347 aa20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 BCDIN3DQ7Z5W3 292 aaKnown RBP20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 LRRC56Q8IYG6 542 aaPredicted RBP20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 RNFT2Q96EX2 444 aa20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 SGK2Q9HBY8 427 aa20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 ZDHHC3Q9NYG2 299 aa20.5■□□□□ 0.87
POLR2J3-220ENST00000613744 LRRC72A6NJI9 287 aa20.49■□□□□ 0.87
POLR2J3-220ENST00000613744 C6orf47O95873 294 aa20.49■□□□□ 0.87
POLR2J3-220ENST00000613744 IGLV3-19P01714 112 aa20.49■□□□□ 0.87
POLR2J3-220ENST00000613744 CHRM5P08912 532 aaPredicted RBP20.49■□□□□ 0.87
POLR2J3-220ENST00000613744 CD22P20273 847 aa20.49■□□□□ 0.87
POLR2J3-220ENST00000613744 KELP23276 732 aa20.49■□□□□ 0.87
POLR2J3-220ENST00000613744 PDE7AQ13946 482 aa20.49■□□□□ 0.87
POLR2J3-220ENST00000613744 ZNF385BQ569K4 471 aa20.49■□□□□ 0.87
POLR2J3-220ENST00000613744 PYHIN1Q6K0P9 492 aa20.49■□□□□ 0.87
POLR2J3-220ENST00000613744 BHLHB9Q6PI77 547 aa20.49■□□□□ 0.87
POLR2J3-220ENST00000613744 OR6M1Q8NGM8 313 aa20.49■□□□□ 0.87
POLR2J3-220ENST00000613744 GIMAP1Q8WWP7 306 aa20.49■□□□□ 0.87
POLR2J3-220ENST00000613744 FBXW5Q969U6 566 aa20.49■□□□□ 0.87
POLR2J3-220ENST00000613744 ZNF436Q9C0F3 470 aaPredicted RBP20.49■□□□□ 0.87
POLR2J3-220ENST00000613744 OSGEPL1Q9H4B0 414 aa20.49■□□□□ 0.87
POLR2J3-220ENST00000613744 IMP3Q9NV31 184 aaKnown RBP20.49■□□□□ 0.87
POLR2J3-220ENST00000613744 CLCA2Q9UQC9 943 aa20.49■□□□□ 0.87
POLR2J3-220ENST00000613744 CXCL3P19876 107 aa20.49■□□□□ 0.87
POLR2J3-220ENST00000613744 GIPRP48546 466 aa20.49■□□□□ 0.87
POLR2J3-220ENST00000613744 PITPNBP48739 271 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms